BLASTN 2.2.3 [Apr-24-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PTA.CL.0.cl.014.Contig1
         (435 letters)

Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa 
           29,161 sequences; 44,058,232 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g43430.1  68415.m05398 hydroxyacylglutathione hydrolase, ...   444   e-124
At2g43430.2  68415.m05397 hydroxyacylglutathione hydrolase, ...   428   e-119
At1g65310.1  68414.m07406 xyloglucan:xyloglucosyl transferas...   333   7e-91
At4g30280.1  68417.m04304 xyloglucan:xyloglucosyl transferas...   143   1e-33
At4g30290.1  68417.m04305 xyloglucan:xyloglucosyl transferas...    74   1e-12
>At2g43430.1 68415.m05398 hydroxyacylglutathione hydrolase, mitochondrial /
           glyoxalase II (GLX2-1) identical to SP|O24495
           Hydroxyacylglutathione hydrolase, mitochondrial
           precursor (EC 3.1.2.6) (Glyoxalase II) (Glx II)
           {Arabidopsis thaliana}
          Length = 1387

 Score =  444 bits (224), Expect = e-124
 Identities = 237/240 (98%), Gaps = 1/240 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctccaatcctagaacaccaaggaatcgatgaattggtggtggtagatgaagctttggag 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cctccaatcctagaacacgaaggaatcgatgaattggtggtggtagatgaagctttggag 203

                                                                       
Query: 61  atcacaggcatcctctatatatctcttctctctgattcttcagatagaaacgagaggata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atcacaggcatcctctatatatctcttctctctgattcttcagatagaaacgagaggata 143

                                                                       
Query: 121 tgattgtggtacctttgaagaggcctcctttgagagatattgcgcgtagatagaagaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tgattgtggtacctttgaagaggcctcctttgagagatattgcgcgtagatagaagaaac 83

                                                                       
Query: 181 tcagaattactcgcctgagctgtgatgacgagtctgccacttcgagcaggaaacaacgtc 240
           ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 82  tcagaattactcgcctgagctgtgatgacgagtctgcgacttcga-caggaaacaacgtc 24
>At2g43430.2 68415.m05397 hydroxyacylglutathione hydrolase, mitochondrial /
           glyoxalase II (GLX2-1) identical to SP|O24495
           Hydroxyacylglutathione hydrolase, mitochondrial
           precursor (EC 3.1.2.6) (Glyoxalase II) (Glx II)
           {Arabidopsis thaliana}
          Length = 1746

 Score =  428 bits (216), Expect = e-119
 Identities = 229/232 (98%), Gaps = 1/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   cctagaacaccaaggaatcgatgaattggtggtggtagatgaagctttggagatcacagg 68
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cctagaacacgaaggaatcgatgaattggtggtggtagatgaagctttggagatcacagg 194

                                                                       
Query: 69  catcctctatatatctcttctctctgattcttcagatagaaacgagaggatatgattgtg 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 catcctctatatatctcttctctctgattcttcagatagaaacgagaggatatgattgtg 134

                                                                       
Query: 129 gtacctttgaagaggcctcctttgagagatattgcgcgtagatagaagaaactcagaatt 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gtacctttgaagaggcctcctttgagagatattgcgcgtagatagaagaaactcagaatt 74

                                                               
Query: 189 actcgcctgagctgtgatgacgagtctgccacttcgagcaggaaacaacgtc 240
           ||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 73  actcgcctgagctgtgatgacgagtctgcgacttcga-caggaaacaacgtc 23
>At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase, putative /
            xyloglucan endotransglycosylase, putative /
            endo-xyloglucan transferase, putative similar to
            xyloglucan endotransglycosylase TCH4 GI:886116 from
            [Arabidopsis thaliana]
          Length = 1003

 Score =  333 bits (168), Expect = 7e-91
 Identities = 181/184 (98%), Gaps = 1/184 (0%)
 Strand = Plus / Plus

                                                                        
Query: 248  ctcgaggagttcctcccgagtgcacgtaaattcttgattctttgatacatgaatatgtta 307
            |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 821  ctcgaggagttcctgccgagtgcacttaaattcttgattctttgatacatgaatatgtta 880

                                                                        
Query: 308  cttggcattgcctttgtaactcaatcaagtttttatttatttttatcatttatttgttgc 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881  cttggcattgcctttgtaactcaatcaagtttttatttatttttatcatttatttgttgc 940

                                                                        
Query: 368  tcatatatacagtatgtggtgctttgtgtaagatgttttaagattgaagtaataaaaata 427
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 941  tcatatatacagtatgtggtg-tttgtgtaagatgttttaagattgaagtaataaaaata 999

                
Query: 428  aatt 431
            ||||
Sbjct: 1000 aatt 1003
>At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase, putative /
            xyloglucan endotransglycosylase, putative /
            endo-xyloglucan transferase, putative similar to
            xyloglucan endotransglycosylase TCH4 GI:886116 from
            [Arabidopsis thaliana]
          Length = 1048

 Score =  143 bits (72), Expect = 1e-33
 Identities = 162/189 (85%), Gaps = 11/189 (5%)
 Strand = Plus / Plus

                                                                        
Query: 248  ctcgaggagttcctcccgagtgcacgtaaattcttgattctttgatacatgaatatgtta 307
            ||||||| ||||||   |||||||  |||||| |||||||||||||||||||||| ||||
Sbjct: 870  ctcgaggtgttcctgtagagtgcagttaaattgttgattctttgatacatgaataagtta 929

                                                                        
Query: 308  cttggcattgcctttgtaactcaatcaagtttttatttatttttatcatttatttgttgc 367
            |||||||||||||| ||||||||||  |||| |||  ||||||||||||| |||||||||
Sbjct: 930  cttggcattgccttagtaactcaattgagttcttacatatttttatcattcatttgttgc 989

                                                                        
Query: 368  tcatatatacagtatgtggtgctttgtgtaagatg-ttttaagattgaagtaataaaaat 426
            ||||||     ||||| |||| ||||||||||||| ||||||    ||||||||||||||
Sbjct: 990  tcatat-----gtatgcggtg-tttgtgtaagatgattttaa----gaagtaataaaaat 1039

                     
Query: 427  aaattatgg 435
            |||||||||
Sbjct: 1040 aaattatgg 1048
>At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase, putative /
           xyloglucan endotransglycosylase, putative /
           endo-xyloglucan transferase, putative similar to
           xyloglucan endotransglycosylase TCH4 GI:886116 from
           [Arabidopsis thaliana]
          Length = 1127

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                       
Query: 248 ctcgaggagttcctcccgagtgcacgtaaattcttgattctttgatacatgaatatgtta 307
           ||||||| |||||||| |||||||  |||||  ||||||||||||| ||| |||| ||||
Sbjct: 857 ctcgaggtgttcctccagagtgcagctaaatgattgattctttgattcataaataagtta 916

                                    
Query: 308 cttggcattgcctttgtaactcaat 332
           |||| | ||| ||||||||||||||
Sbjct: 917 cttgacgttgtctttgtaactcaat 941
  Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
    Posted date:  Jun 25, 2004 12:58 PM
  Number of letters in database: 44,058,232
  Number of sequences in database:  29,161
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,786
Number of Sequences: 29161
Number of extensions: 16786
Number of successful extensions: 1495
Number of sequences better than 10.0: 45
length of query: 435
length of database: 44,058,232
effective HSP length: 17
effective length of query: 418
effective length of database: 43,562,495
effective search space: 18209122910
effective search space used: 18209122910
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)