BLASTN 1.5.4-Paracel [2003-06-05]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ARI3_17466
         (294 letters)

Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722 
           26,637 sequences; 39,126,732 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g01560.F                                                           583   e-166
PTA.sd.11172.C1 nseq=8                                                299   6e-81
PTA.sd.7265.C1 nseq=6                                                 135   2e-31
PTA.sd.723.C1 nseq=7                                                   58   4e-08
At1g07880.F                                                            46   1e-04
PTA.sd.5240.C1 nseq=2                                                  44   6e-04
PTA.sd.3160.C1 nseq=8                                                  42   0.002
PTA.sd.7335.C1 nseq=6                                                  40   0.009
PTA.sd.7085.C1 nseq=15                                                 40   0.009
PTA.sd.11721.C1 nseq=17                                                38   0.035
At4g36450.F                                                            38   0.035
PTA.sd.6383.C1 nseq=8                                                  36   0.14 
PTA.sd.16169.C1 nseq=4                                                 34   0.55 
PTA.sd.13373.C1 nseq=9                                                 34   0.55 
PTA.sd.11512.C1 nseq=4                                                 34   0.55 
>At1g01560.F
          Length = 1110

 Score =  583 bits (294), Expect = e-166
 Identities = 294/294 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctgtatcagttgttgcgaggcctcaagtatgtgcattcagccaatgtactgcatcgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tcctgtatcagttgttgcgaggcctcaagtatgtgcattcagccaatgtactgcatcgtg 496

                                                                       
Query: 61  atttaaaaccgagtaacttgctcctgaatgcaaactgtgacctcaagattggggattttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atttaaaaccgagtaacttgctcctgaatgcaaactgtgacctcaagattggggattttg 556

                                                                       
Query: 121 ggcttgcgaggactaaatcagagacagacttcatgacagaatatgttgttacacgttggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggcttgcgaggactaaatcagagacagacttcatgacagaatatgttgttacacgttggt 616

                                                                       
Query: 181 accgagctccagagttgctccttaattgctcagaatacactgcagctatcgacatttggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 accgagctccagagttgctccttaattgctcagaatacactgcagctatcgacatttggt 676

                                                                 
Query: 241 ctgtcggttgtatactcggtgaaataatgacgcgggagccgttatttccgggca 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctgtcggttgtatactcggtgaaataatgacgcgggagccgttatttccgggca 730
>PTA.sd.11172.C1 nseq=8
          Length = 1466

 Score =  299 bits (151), Expect = 6e-81
 Identities = 253/287 (88%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctgtatcagttgttgcgaggcctcaagtatgtgcattcagccaatgtactgcatcgtgat 62
           ||||||||||||||||| || ||||| ||||| |||||||| |||||| ||||||| |||
Sbjct: 572 ctgtatcagttgttgcgtgggctcaaatatgttcattcagctaatgtattgcatcgagat 631

                                                                       
Query: 63  ttaaaaccgagtaacttgctcctgaatgcaaactgtgacctcaagattggggattttggg 122
           || ||||| || || ||||||||||||||||| ||||| || ||| |||||||||| |||
Sbjct: 632 ttgaaacctagcaatttgctcctgaatgcaaattgtgatctaaagcttggggatttcggg 691

                                                                       
Query: 123 cttgcgaggactaaatcagagacagacttcatgacagaatatgttgttacacgttggtac 182
           ||||||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||| 
Sbjct: 692 cttgcgaggaccaaatccgagactgactttatgactgaatatgttgttacacgttggtat 751

                                                                       
Query: 183 cgagctccagagttgctccttaattgctcagaatacactgcagctatcgacatttggtct 242
           |||||||||||| |||| ||||||||||| |||||||| ||||| || || |||||||||
Sbjct: 752 cgagctccagagctgctacttaattgctctgaatacacagcagcaattgatatttggtct 811

                                                          
Query: 243 gtcggttgtatactcggtgaaataatgacgcgggagccgttatttcc 289
           |||||||||||||||||||||| |||||| || ||||| || |||||
Sbjct: 812 gtcggttgtatactcggtgaaacaatgacacgagagcccttgtttcc 858
>PTA.sd.7265.C1 nseq=6
          Length = 1325

 Score =  135 bits (68), Expect = 2e-31
 Identities = 143/168 (85%)
 Strand = Plus / Plus

                                                                       
Query: 105 aagattggggattttgggcttgcgaggactaaatcagagacagacttcatgacagaatat 164
           |||||||| |||||||||||||| || || |  || || |||||||||||||| ||||||
Sbjct: 597 aagattggtgattttgggcttgcaagaacaacttccgacacagacttcatgactgaatat 656

                                                                       
Query: 165 gttgttacacgttggtaccgagctccagagttgctccttaattgctcagaatacactgca 224
           || ||||| ||||||||| | ||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 657 gtcgttacccgttggtacagggctcctgagttgcttcttaactgctcagagtacaccgca 716

                                                           
Query: 225 gctatcgacatttggtctgtcggttgtatactcggtgaaataatgacg 272
           ||||| || ||||||||||| || || |||||||| ||||| ||||||
Sbjct: 717 gctattgatatttggtctgttggctgcatactcggcgaaatcatgacg 764
>PTA.sd.723.C1 nseq=7
          Length = 1630

 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 150 ttcatgacagaatatgttgttacacgttggtaccgagctccagag 194
           |||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 679 ttcatgactgaatatgttgtgactcgttggtaccgagccccagag 723

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 9   cagttgttgcgaggcctcaagtatgtgcattcagccaatgtactgcatcgtgatttaaaa 68
           |||||| | ||||| ||||||||| | |||||||||||| | ||||| || ||||| |||
Sbjct: 535 cagttgcttcgagggctcaagtatattcattcagccaatatcctgcaccgagatttgaaa 594

             
Query: 69  cc 70
           ||
Sbjct: 595 cc 596
>At1g07880.F
          Length = 1092

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 208 gctcagaatacactgcagctatcgacatttggtctgtcggttg 250
           |||| |||||||| | |||||| |||||||||||||| |||||
Sbjct: 623 gctctgaatacacaggagctattgacatttggtctgttggttg 665

 Score = 38.2 bits (19), Expect = 0.035
 Identities = 49/59 (83%)
 Strand = Plus / Plus

                                                                      
Query: 66  aaaccgagtaacttgctcctgaatgcaaactgtgacctcaagattggggattttgggct 124
           |||||||| |||||| | |||||| | ||||||||||| || ||  | |||||||||||
Sbjct: 481 aaaccgagcaacttggttctgaatacgaactgtgacctgaaaatctgtgattttgggct 539
>PTA.sd.5240.C1 nseq=2
          Length = 1295

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 150 ttcatgacagaatatgttgttacacgttggtaccgagc 187
           |||||||| || ||||| ||||||||||||||| ||||
Sbjct: 753 ttcatgactgagtatgtggttacacgttggtacagagc 790
>PTA.sd.3160.C1 nseq=8
          Length = 1614

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 150 ttcatgacagaatatgttgttacacgttggtaccgagctccagag 194
           |||||||| ||||||||||| ||  | ||||||||||| ||||||
Sbjct: 742 ttcatgactgaatatgttgtgactagatggtaccgagcaccagag 786

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 41/49 (83%)
 Strand = Plus / Plus

                                                            
Query: 85  tgaatgcaaactgtgacctcaagattggggattttgggcttgcgaggac 133
           ||||||||||||| ||| | |||||  | || |||||||| ||||||||
Sbjct: 674 tgaatgcaaactgcgacttaaagatatgtgactttgggctagcgaggac 722
>PTA.sd.7335.C1 nseq=6
          Length = 1151

 Score = 40.1 bits (20), Expect = 0.009
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 106 agattggggattttgggctt 125
           ||||||||||||||||||||
Sbjct: 722 agattggggattttgggctt 703
>PTA.sd.7085.C1 nseq=15
          Length = 1599

 Score = 40.1 bits (20), Expect = 0.009
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                       
Query: 150 ttcatgacagaatatgttgttacacgttggtaccgagctccagagttgctccttaattgc 209
           |||||||| ||||||||||| ||  | |||||||| || |||||| | ||| | || |  
Sbjct: 770 ttcatgactgaatatgttgtcacgagatggtaccgtgcaccagagcttctcttaaactct 829

                                                       
Query: 210 tcagaatacactgcagctatcgacatttggtctgtcggttgtat 253
           || || || ||||||||||||||  |||||||||| || |||||
Sbjct: 830 tctgattatactgcagctatcgatgtttggtctgtaggctgtat 873

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 53/65 (81%)
 Strand = Plus / Plus

                                                                       
Query: 60  gatttaaaaccgagtaacttgctcctgaatgcaaactgtgacctcaagattggggatttt 119
           ||||| ||||| |||||  | |||||||| |||||||| ||||| || ||  | ||||||
Sbjct: 680 gatttgaaaccaagtaatctcctcctgaacgcaaactgcgacctaaaaatctgcgatttt 739

                
Query: 120 gggct 124
           |||||
Sbjct: 740 gggct 744
>PTA.sd.11721.C1 nseq=17
          Length = 2066

 Score = 38.2 bits (19), Expect = 0.035
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 171 acacgttggtaccgagctccaga 193
           ||||||||||| |||||||||||
Sbjct: 950 acacgttggtatcgagctccaga 972
>At4g36450.F
          Length = 1086

 Score = 38.2 bits (19), Expect = 0.035
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                              
Query: 153 atgacagaatatgttgttacacgttggtaccgagc 187
           |||||||| ||||| || || ||||||||||||||
Sbjct: 559 atgacagagtatgtggtcactcgttggtaccgagc 593

 Score = 36.2 bits (18), Expect = 0.14
 Identities = 39/46 (84%)
 Strand = Plus / Plus

                                                         
Query: 85  tgaatgcaaactgtgacctcaagattggggattttgggcttgcgag 130
           ||||||| || ||||| || |||||| | ||||| |||||||||||
Sbjct: 497 tgaatgctaattgtgatctaaagatttgtgatttcgggcttgcgag 542
>PTA.sd.6383.C1 nseq=8
          Length = 1795

 Score = 36.2 bits (18), Expect = 0.14
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 257 cggtgaaataatgacgcg 274
           ||||||||||||||||||
Sbjct: 924 cggtgaaataatgacgcg 907
>PTA.sd.16169.C1 nseq=4
          Length = 3608

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 220  ctgcagctatcgacatt 236
            |||||||||||||||||
Sbjct: 2367 ctgcagctatcgacatt 2351

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 36   cattcagccaatgta 50
            |||||||||||||||
Sbjct: 2354 cattcagccaatgta 2340
>PTA.sd.13373.C1 nseq=9
          Length = 1726

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 3   ctgtatcagttgttgcg 19
           |||||||||||||||||
Sbjct: 878 ctgtatcagttgttgcg 862
>PTA.sd.11512.C1 nseq=4
          Length = 2824

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                 
Query: 101  cctcaagattggggattttgg 121
            |||||||||||| ||||||||
Sbjct: 1472 cctcaagattggagattttgg 1492
>At5g02070.F
          Length = 1974

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 195 ttgctccttaattgctc 211
           |||||||||||||||||
Sbjct: 409 ttgctccttaattgctc 425
>PTA.sd.4530.C1 nseq=3
          Length = 1218

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 104 caagattggggatttt 119
           ||||||||||||||||
Sbjct: 362 caagattggggatttt 377
>PTA.sd.3113.C1 nseq=2
          Length = 2064

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 102 ctcaagattggggattttgg 121
           ||||||||||| ||||||||
Sbjct: 832 ctcaagattggtgattttgg 851
>PTA.sd.2899.C1 nseq=17
          Length = 1968

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                   
Query: 216 tacactgcagctatcgacatttgg 239
           |||||| ||||||||||| |||||
Sbjct: 586 tacactccagctatcgacgtttgg 609
>PTA.sd.10740.C1 nseq=2
          Length = 3931

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                
Query: 108  attggggattttgggcttgc 127
            |||||||||||||| |||||
Sbjct: 1891 attggggattttggtcttgc 1910
>PTA.sd.9899.C1 nseq=7
          Length = 6116

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 107  gattggggattttgg 121
            |||||||||||||||
Sbjct: 3049 gattggggattttgg 3063
>PTA.sd.7467.C1 nseq=12
          Length = 1810

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 48  gtactgcatcgtgat 62
           |||||||||||||||
Sbjct: 883 gtactgcatcgtgat 869
>PTA.sd.7286.C1 nseq=3
          Length = 1345

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 108  attggggattttggg 122
            |||||||||||||||
Sbjct: 1253 attggggattttggg 1267
>PTA.sd.7015.C1 nseq=27
          Length = 2420

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 30/35 (85%)
 Strand = Plus / Plus

                                              
Query: 87  aatgcaaactgtgacctcaagattggggattttgg 121
           |||||||||||| | || |||||| | ||||||||
Sbjct: 893 aatgcaaactgtaaacttaagatttgtgattttgg 927

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 1   tcctgtatcagttgttgcg 19
           ||||||||||||| |||||
Sbjct: 807 tcctgtatcagttattgcg 825
>PTA.sd.2965.C1 nseq=18
          Length = 2045

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 24/27 (88%)
 Strand = Plus / Plus

                                       
Query: 168  gttacacgttggtaccgagctccagag 194
            |||||||  ||||| ||||||||||||
Sbjct: 994  gttacactatggtatcgagctccagag 1020
>PTA.sd.18018.C1 nseq=9
          Length = 2539

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                               
Query: 152  catgacagaatatgttgtt 170
            ||||||||||| |||||||
Sbjct: 1494 catgacagaatctgttgtt 1512
>PTA.sd.17864.C1 nseq=23
          Length = 1901

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 113 ggattttgggcttgc 127
           |||||||||||||||
Sbjct: 651 ggattttgggcttgc 665
>PTA.sd.17747.C1 nseq=6
          Length = 1833

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                  
Query: 177 tggtaccgagctccagagttgct 199
           ||||||||||| |||||| ||||
Sbjct: 797 tggtaccgagcaccagagctgct 819
>PTA.sd.17240.C1 nseq=12
          Length = 1557

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 81   ctcctgaatgcaaac 95
            |||||||||||||||
Sbjct: 1241 ctcctgaatgcaaac 1255
>PTA.sd.10212.C1 nseq=10
          Length = 1743

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 3    ctgtatcagttgttg 17
            |||||||||||||||
Sbjct: 1675 ctgtatcagttgttg 1689
>At5g14990.F
          Length = 2001

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 105 aagattggggatttt 119
           |||||||||||||||
Sbjct: 433 aagattggggatttt 447
>At5g06820.F
          Length = 2208

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 145  cagacttcatgacag 159
            |||||||||||||||
Sbjct: 1914 cagacttcatgacag 1928
>At4g34940.F
          Length = 1995

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 50  actgcatcgtgattt 64
           |||||||||||||||
Sbjct: 322 actgcatcgtgattt 308
>At2g02300.F
          Length = 855

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 105 aagattggggatttt 119
           |||||||||||||||
Sbjct: 706 aagattggggatttt 720
>At1g17640.F
          Length = 1110

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 276  gagccgttatttccg 290
            |||||||||||||||
Sbjct: 1043 gagccgttatttccg 1029
  Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722
    Posted date:  Jul 22, 2004 10:20 PM
  Number of letters in database: 39,126,732
  Number of sequences in database:  26,637
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 294
length of database: 39,126,732
effective HSP length: 16
effective length of query: 278
effective length of database: 38,700,540
effective search space: 10758750120
effective search space used: 10758750120
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)