BLASTN 1.5.4-Paracel [2003-06-05]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ARI3_17089
         (293 letters)

Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722 
           26,637 sequences; 39,126,732 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g01460.F                                                           581   e-165
At4g01190.F                                                            98   4e-20
PTA.sd.8025.C1 nseq=3                                                  50   9e-06
PTA.sd.8734.C1 nseq=6                                                  36   0.14 
PTA.sd.8662.C1 nseq=43                                                 36   0.14 
PTA.sd.8651.C1 nseq=7                                                  36   0.14 
PTA.sd.8638.C1 nseq=13                                                 36   0.14 
At3g62620.F                                                            36   0.14 
PTA.sd.9292.C1 nseq=6                                                  34   0.55 
PTA.sd.7408.C1 nseq=9                                                  34   0.55 
PTA.sd.532.C1 nseq=2                                                   34   0.55 
PTA.sd.517.C1 nseq=27                                                  34   0.55 
PTA.sd.2254.C1 nseq=6                                                  34   0.55 
PTA.sd.1081.C1 nseq=13                                                 34   0.55 
PTA.sd.10610.C1 nseq=22                                                34   0.55 
>At1g01460.F
          Length = 1278

 Score =  581 bits (293), Expect = e-165
 Identities = 293/293 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    actaacttcggtatgaagataccaggacgagcacgacgggttgggagaggagaatcaggg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982  actaacttcggtatgaagataccaggacgagcacgacgggttgggagaggagaatcaggg 1041

                                                                        
Query: 61   agtgtggtgggaaaacagagcagagaaggaggagaagaatggtacgatgtgattttgtat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 agtgtggtgggaaaacagagcagagaaggaggagaagaatggtacgatgtgattttgtat 1101

                                                                        
Query: 121  cttgggattatagacattttccaagactacggtgtgagaaaacgccttgaacattgttac 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 cttgggattatagacattttccaagactacggtgtgagaaaacgccttgaacattgttac 1161

                                                                        
Query: 181  aagtcaattcaacacagctctaagacaatctcagccgtccatcccaagatgtattcttct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 aagtcaattcaacacagctctaagacaatctcagccgtccatcccaagatgtattcttct 1221

                                                                 
Query: 241  cgtttccaagactttgtctctcagatcttcttaccagacgaagatccttctca 293
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 cgtttccaagactttgtctctcagatcttcttaccagacgaagatccttctca 1274
>At4g01190.F
          Length = 1206

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 142/173 (82%)
 Strand = Plus / Plus

                                                                        
Query: 88   ggaggagaagaatggtacgatgtgattttgtatcttgggattatagacattttccaagac 147
            |||| ||||||||||||| ||||  |||||||| | |||||  ||||||  || ||||||
Sbjct: 988  ggagaagaagaatggtacaatgttgttttgtatatagggatagtagacacatttcaagac 1047

                                                                        
Query: 148  tacggtgtgagaaaacgccttgaacattgttacaagtcaattcaacacagctctaagaca 207
            || ||| |||  |||||| | |||||||||||||| || |||||| | | ||| ||  ||
Sbjct: 1048 tatggtatgaagaaacgcatagaacattgttacaaatccattcaatataactcaaactca 1107

                                                                 
Query: 208  atctcagccgtccatcccaagatgtattcttctcgtttccaagactttgtctc 260
            |||||| |||||||||| ||||| || |||||| | |||||||||||||||||
Sbjct: 1108 atctcaaccgtccatcctaagatctactcttctagattccaagactttgtctc 1160
>PTA.sd.8025.C1 nseq=3
          Length = 2798

 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                             
Query: 103  tacgatgtgattttgtatcttgggattatagacattttccaagactacg 151
            |||||||||||  ||||| | || |||||||||||| ||||||||||||
Sbjct: 2354 tacgatgtgatagtgtatttcggtattatagacattctccaagactacg 2402
>PTA.sd.8734.C1 nseq=6
          Length = 3027

 Score = 36.2 bits (18), Expect = 0.14
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 69   gggaaaacagagcagagaagga 90
            ||||| ||||||||||||||||
Sbjct: 2797 gggaagacagagcagagaagga 2818
>PTA.sd.8662.C1 nseq=43
          Length = 1558

 Score = 36.2 bits (18), Expect = 0.14
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 88  ggaggagaagaatggtacgatg 109
           ||||||||||||||| ||||||
Sbjct: 85  ggaggagaagaatgggacgatg 106
>PTA.sd.8651.C1 nseq=7
          Length = 4404

 Score = 36.2 bits (18), Expect = 0.14
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 70   ggaaaacagagcagagaa 87
            ||||||||||||||||||
Sbjct: 2358 ggaaaacagagcagagaa 2375
>PTA.sd.8638.C1 nseq=13
          Length = 2121

 Score = 36.2 bits (18), Expect = 0.14
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 77  agagcagagaaggaggagaaga 98
           |||| |||||||||||||||||
Sbjct: 103 agagaagagaaggaggagaaga 82
>At3g62620.F
          Length = 1290

 Score = 36.2 bits (18), Expect = 0.14
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 205  acaatctcagccgtccat 222
            ||||||||||||||||||
Sbjct: 1118 acaatctcagccgtccat 1101
>PTA.sd.9292.C1 nseq=6
          Length = 874

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 77  agagcagagaaggagga 93
           |||||||||||||||||
Sbjct: 110 agagcagagaaggagga 126
>PTA.sd.7408.C1 nseq=9
          Length = 1496

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                 
Query: 234  ttcttctcgtttccaagactt 254
            ||||||| |||||||||||||
Sbjct: 1384 ttcttcttgtttccaagactt 1404
>PTA.sd.532.C1 nseq=2
          Length = 3129

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 77  agagcagagaaggaggagaag 97
           |||||||||||||| ||||||
Sbjct: 889 agagcagagaaggaagagaag 909
>PTA.sd.517.C1 nseq=27
          Length = 1416

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 81  cagagaaggaggagaag 97
           |||||||||||||||||
Sbjct: 306 cagagaaggaggagaag 322
>PTA.sd.2254.C1 nseq=6
          Length = 1620

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 83  gagaaggaggagaagaa 99
           |||||||||||||||||
Sbjct: 134 gagaaggaggagaagaa 118
>PTA.sd.1081.C1 nseq=13
          Length = 879

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 204 gacaatctcagccgtcc 220
           |||||||||||||||||
Sbjct: 109 gacaatctcagccgtcc 125
>PTA.sd.10610.C1 nseq=22
          Length = 1491

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 256 gtctctcagatcttctt 272
           |||||||||||||||||
Sbjct: 53  gtctctcagatcttctt 37
>At5g19060.F
          Length = 1656

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 81  cagagaaggaggagaag 97
           |||||||||||||||||
Sbjct: 192 cagagaaggaggagaag 176
>At5g14460.F
          Length = 1623

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 83  gagaaggaggagaagaa 99
           |||||||||||||||||
Sbjct: 775 gagaaggaggagaagaa 791
>At3g49150.F
          Length = 1773

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 251  actttgtctctcagatc 267
            |||||||||||||||||
Sbjct: 1363 actttgtctctcagatc 1379
>At3g18650.F
          Length = 1161

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 83  gagaaggaggagaagaa 99
           |||||||||||||||||
Sbjct: 340 gagaaggaggagaagaa 356
>At2g39320.F
          Length = 570

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 83  gagaaggaggagaagaa 99
           |||||||||||||||||
Sbjct: 433 gagaaggaggagaagaa 449
>At1g58400.F
          Length = 2703

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 84   agaaggaggagaagaat 100
            |||||||||||||||||
Sbjct: 2634 agaaggaggagaagaat 2650
>At1g59124.F PTA.sd.3155.singlet
          Length = 3468

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 85   gaaggaggagaagaat 100
            ||||||||||||||||
Sbjct: 2851 gaaggaggagaagaat 2866
>PTA.sd.4345.C1 nseq=4
          Length = 1603

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 83  gagaaggaggagaaga 98
           ||||||||||||||||
Sbjct: 240 gagaaggaggagaaga 225
>PTA.sd.4221.C1 nseq=2
          Length = 2688

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                
Query: 80   gcagagaaggaggagaagaa 99
            ||||||||||| ||||||||
Sbjct: 1702 gcagagaaggatgagaagaa 1683
>PTA.sd.4090.C1 nseq=6
          Length = 1525

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 108  tgtgattttgtatctt 123
            ||||||||||||||||
Sbjct: 1370 tgtgattttgtatctt 1385
>PTA.sd.1971.C1 nseq=2
          Length = 3895

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                          
Query: 84 agaaggaggagaagaa 99
          ||||||||||||||||
Sbjct: 56 agaaggaggagaagaa 71
>PTA.sd.18074.C1 nseq=2
          Length = 1864

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 278 acgaagatccttctca 293
           ||||||||||||||||
Sbjct: 489 acgaagatccttctca 474
>PTA.sd.18028.C2 nseq=10
          Length = 2297

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 83  gagaaggaggagaaga 98
           ||||||||||||||||
Sbjct: 276 gagaaggaggagaaga 291
>PTA.sd.1792.C1 nseq=2
          Length = 1672

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 227 agatgtattcttctcgtttc 246
           ||||| ||||||||||||||
Sbjct: 434 agatgcattcttctcgtttc 453
>PTA.sd.17728.C1 nseq=12
          Length = 2508

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 88   ggaggagaagaatggt 103
            ||||||||||||||||
Sbjct: 2116 ggaggagaagaatggt 2131
>PTA.sd.16189.C1 nseq=4
          Length = 2391

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 82  agagaaggaggagaag 97
           ||||||||||||||||
Sbjct: 309 agagaaggaggagaag 324
>PTA.sd.15120.C1 nseq=4
          Length = 1929

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                          
Query: 81 cagagaaggaggagaa 96
          ||||||||||||||||
Sbjct: 94 cagagaaggaggagaa 79
>PTA.sd.15026.C1 nseq=14
          Length = 2777

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 85   gaaggaggagaagaat 100
            ||||||||||||||||
Sbjct: 1405 gaaggaggagaagaat 1420
>PTA.sd.14963.C1 nseq=6
          Length = 1492

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 83  gagaaggaggagaaga 98
           ||||||||||||||||
Sbjct: 360 gagaaggaggagaaga 375
>PTA.sd.13707.C1 nseq=6
          Length = 5159

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 247 caagactttgtctctc 262
           ||||||||||||||||
Sbjct: 909 caagactttgtctctc 924
>PTA.sd.13605.C1 nseq=6
          Length = 1345

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 208 atctcagccgtccatc 223
           ||||||||||||||||
Sbjct: 829 atctcagccgtccatc 814
>PTA.sd.1282.C1 nseq=12
          Length = 2498

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 38  gggttgggagaggaga 53
           ||||||||||||||||
Sbjct: 351 gggttgggagaggaga 336
>PTA.sd.12044.C1 nseq=7
          Length = 1209

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 215 ccgtccatcccaagat 230
           ||||||||||||||||
Sbjct: 151 ccgtccatcccaagat 166
>PTA.sd.10793.C1 nseq=3
          Length = 4500

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 73  aaacagagcagagaag 88
           ||||||||||||||||
Sbjct: 271 aaacagagcagagaag 256
>PTA.sd.10390.C1 nseq=23
          Length = 1332

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 87  aggaggagaagaatgg 102
           ||||||||||||||||
Sbjct: 301 aggaggagaagaatgg 286
>PTA.sd.10045.C1 nseq=2
          Length = 1371

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 208 atctcagccgtccatc 223
           ||||||||||||||||
Sbjct: 979 atctcagccgtccatc 964
>At5g67080.F
          Length = 1035

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 208 atctcagccgtccatc 223
           ||||||||||||||||
Sbjct: 785 atctcagccgtccatc 770
>At5g53220.F
          Length = 1326

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 73  aaacagagcagagaag 88
           ||||||||||||||||
Sbjct: 368 aaacagagcagagaag 383
>At5g52600.F
          Length = 606

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 83  gagaaggaggagaaga 98
           ||||||||||||||||
Sbjct: 443 gagaaggaggagaaga 458
>At5g51310.F
          Length = 1002

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                               
Query: 203 agacaatctcagccgtccat 222
           |||| |||||||||||||||
Sbjct: 750 agacgatctcagccgtccat 731
>At5g42640.F
          Length = 903

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 84  agaaggaggagaagaa 99
           ||||||||||||||||
Sbjct: 162 agaaggaggagaagaa 147
>At3g46750.F
          Length = 1248

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 84  agaaggaggagaagaa 99
           ||||||||||||||||
Sbjct: 369 agaaggaggagaagaa 384
>At3g24620.F
          Length = 1572

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 254 ttgtctctcagatctt 269
           ||||||||||||||||
Sbjct: 246 ttgtctctcagatctt 231
>At2g37740.F
          Length = 915

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 84  agaaggaggagaagaa 99
           ||||||||||||||||
Sbjct: 456 agaaggaggagaagaa 441
>At1g22600.F
          Length = 1158

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 58  gggagtgtggtgggaa 73
           ||||||||||||||||
Sbjct: 577 gggagtgtggtgggaa 592
  Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722
    Posted date:  Jul 22, 2004 10:20 PM
  Number of letters in database: 39,126,732
  Number of sequences in database:  26,637
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 293
length of database: 39,126,732
effective HSP length: 16
effective length of query: 277
effective length of database: 38,700,540
effective search space: 10720049580
effective search space used: 10720049580
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)