BLASTN 1.5.4-Paracel [2003-06-05]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ARI3_16344
(296 letters)
Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722
26,637 sequences; 39,126,732 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g16010.F 587 e-167
PTA.sd.2721.C1 nseq=11 34 0.55
PTA.sd.17821.C1 nseq=9 34 0.55
At1g60250.F 34 0.55
PTA.sd.966.C1 nseq=4 32 2.2
PTA.sd.8485.C1 nseq=11 32 2.2
PTA.sd.5505.C1 nseq=3 32 2.2
PTA.sd.4358.C1 nseq=9 32 2.2
PTA.sd.16135.C1 nseq=5 32 2.2
PTA.sd.15405.C1 nseq=8 32 2.2
PTA.sd.13233.C1 nseq=14 32 2.2
PTA.sd.13080.C1 nseq=6 32 2.2
PTA.sd.10305.C1 nseq=29 32 2.2
At5g02660.F 32 2.2
At4g16020.F 32 2.2
>At4g16010.F
Length = 5829
Score = 587 bits (296), Expect = e-167
Identities = 296/296 (100%)
Strand = Plus / Plus
Query: 1 gagcatcaatctcttacctattggcaatagctcttcttcacttgctaacaggacggataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4857 gagcatcaatctcttacctattggcaatagctcttcttcacttgctaacaggacggataa 4916
Query: 61 tgctgatacttctcctcttcaagaagctgcaacagaaacaaacagctctactgtgcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4917 tgctgatacttctcctcttcaagaagctgcaacagaaacaaacagctctactgtgcaaga 4976
Query: 121 agctgcagaatcaacaactagctctacaatgcaagaacctgcttcaaatcagtctactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4977 agctgcagaatcaacaactagctctacaatgcaagaacctgcttcaaatcagtctactca 5036
Query: 181 tccaatgataacacggtctaagaaaggtattacaaagcctaatccacggtatggacttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5037 tccaatgataacacggtctaagaaaggtattacaaagcctaatccacggtatggacttct 5096
Query: 241 tacacacaaagttaaatatgcagaaccaaaaacggttacagaagctcttaaacacc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5097 tacacacaaagttaaatatgcagaaccaaaaacggttacagaagctcttaaacacc 5152
Score = 587 bits (296), Expect = e-167
Identities = 296/296 (100%)
Strand = Plus / Plus
Query: 1 gagcatcaatctcttacctattggcaatagctcttcttcacttgctaacaggacggataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2157 gagcatcaatctcttacctattggcaatagctcttcttcacttgctaacaggacggataa 2216
Query: 61 tgctgatacttctcctcttcaagaagctgcaacagaaacaaacagctctactgtgcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2217 tgctgatacttctcctcttcaagaagctgcaacagaaacaaacagctctactgtgcaaga 2276
Query: 121 agctgcagaatcaacaactagctctacaatgcaagaacctgcttcaaatcagtctactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2277 agctgcagaatcaacaactagctctacaatgcaagaacctgcttcaaatcagtctactca 2336
Query: 181 tccaatgataacacggtctaagaaaggtattacaaagcctaatccacggtatggacttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2337 tccaatgataacacggtctaagaaaggtattacaaagcctaatccacggtatggacttct 2396
Query: 241 tacacacaaagttaaatatgcagaaccaaaaacggttacagaagctcttaaacacc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2397 tacacacaaagttaaatatgcagaaccaaaaacggttacagaagctcttaaacacc 2452
>PTA.sd.2721.C1 nseq=11
Length = 1303
Score = 34.2 bits (17), Expect = 0.55
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 70 ttctcctcttcaagaagctgc 90
|||| ||||||||||||||||
Sbjct: 277 ttcttctcttcaagaagctgc 297
>PTA.sd.17821.C1 nseq=9
Length = 1065
Score = 34.2 bits (17), Expect = 0.55
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 62 gctgatacttctcctct 78
|||||||||||||||||
Sbjct: 544 gctgatacttctcctct 528
>At1g60250.F
Length = 756
Score = 34.2 bits (17), Expect = 0.55
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 275 gttacagaagctcttaa 291
|||||||||||||||||
Sbjct: 52 gttacagaagctcttaa 68
>PTA.sd.966.C1 nseq=4
Length = 629
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 75 ctcttcaagaagctgc 90
||||||||||||||||
Sbjct: 366 ctcttcaagaagctgc 381
>PTA.sd.8485.C1 nseq=11
Length = 1001
Score = 32.2 bits (16), Expect = 2.2
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 75 ctcttcaagaagctgcaaca 94
||||||||||||||| ||||
Sbjct: 667 ctcttcaagaagctgaaaca 686
>PTA.sd.5505.C1 nseq=3
Length = 3160
Score = 32.2 bits (16), Expect = 2.2
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 74 cctcttcaagaagctgcaac 93
||||||||||||||| ||||
Sbjct: 1120 cctcttcaagaagctccaac 1139
>PTA.sd.4358.C1 nseq=9
Length = 2256
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 174 ctactcatccaatgat 189
||||||||||||||||
Sbjct: 361 ctactcatccaatgat 376
>PTA.sd.16135.C1 nseq=5
Length = 1460
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 152 caagaacctgcttcaa 167
||||||||||||||||
Sbjct: 412 caagaacctgcttcaa 427
>PTA.sd.15405.C1 nseq=8
Length = 3761
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 98 acaaacagctctactg 113
||||||||||||||||
Sbjct: 1051 acaaacagctctactg 1066
>PTA.sd.13233.C1 nseq=14
Length = 2811
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 61 tgctgatacttctcct 76
||||||||||||||||
Sbjct: 1990 tgctgatacttctcct 1975
>PTA.sd.13080.C1 nseq=6
Length = 2206
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 20 attggcaatagctctt 35
||||||||||||||||
Sbjct: 773 attggcaatagctctt 788
>PTA.sd.10305.C1 nseq=29
Length = 1351
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 130 atcaacaactagctct 145
||||||||||||||||
Sbjct: 705 atcaacaactagctct 690
>At5g02660.F
Length = 1890
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 150 tgcaagaacctgcttc 165
||||||||||||||||
Sbjct: 1626 tgcaagaacctgcttc 1611
>At4g16020.F
Length = 981
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 87 ctgcaacagaaacaaa 102
||||||||||||||||
Sbjct: 851 ctgcaacagaaacaaa 866
>At1g75610.F
Length = 348
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 75 ctcttcaagaagctgc 90
||||||||||||||||
Sbjct: 212 ctcttcaagaagctgc 227
>At1g75600.F
Length = 411
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 75 ctcttcaagaagctgc 90
||||||||||||||||
Sbjct: 275 ctcttcaagaagctgc 290
>At1g63040.F
Length = 747
Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 25 caatagctcttcttca 40
||||||||||||||||
Sbjct: 624 caatagctcttcttca 609
>PTA.sd.9677.C1 nseq=5
Length = 813
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 68 acttctcctcttcaa 82
|||||||||||||||
Sbjct: 118 acttctcctcttcaa 132
>PTA.sd.9395.C1 nseq=9
Length = 1784
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 63 ctgatacttctcctc 77
|||||||||||||||
Sbjct: 1537 ctgatacttctcctc 1523
>PTA.sd.9379.C1 nseq=12
Length = 2163
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 66 atacttctcctcttc 80
|||||||||||||||
Sbjct: 1766 atacttctcctcttc 1752
>PTA.sd.8922.C1 nseq=5
Length = 1660
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 86 gctgcaacagaaaca 100
|||||||||||||||
Sbjct: 1220 gctgcaacagaaaca 1234
>PTA.sd.8917.C1 nseq=20
Length = 1351
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 75 ctcttcaagaagctg 89
|||||||||||||||
Sbjct: 737 ctcttcaagaagctg 751
>PTA.sd.8584.C1 nseq=12
Length = 3241
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 84 aagctgcaacagaaa 98
|||||||||||||||
Sbjct: 2233 aagctgcaacagaaa 2247
>PTA.sd.8136.C1 nseq=17
Length = 1494
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 69 cttctcctcttcaag 83
|||||||||||||||
Sbjct: 880 cttctcctcttcaag 866
>PTA.sd.799.C1 nseq=2
Length = 5061
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 112 tgtgcaagaagctgc 126
|||||||||||||||
Sbjct: 2373 tgtgcaagaagctgc 2387
>PTA.sd.7574.C1 nseq=32
Length = 1967
Score = 30.2 bits (15), Expect = 8.6
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 67 tacttctcctcttcaagaa 85
|||||||||||| ||||||
Sbjct: 1214 tacttctcctctccaagaa 1196
>PTA.sd.680.C1 nseq=5
Length = 1570
Score = 30.2 bits (15), Expect = 8.6
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 149 atgcaagaacctgcttcaa 167
|||||||||||| ||||||
Sbjct: 420 atgcaagaacctacttcaa 438
>PTA.sd.6732.C1 nseq=14
Length = 3329
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 117 aagaagctgcagaat 131
|||||||||||||||
Sbjct: 2867 aagaagctgcagaat 2881
>PTA.sd.6550.C2 nseq=44
Length = 2542
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 262 agaaccaaaaacggt 276
|||||||||||||||
Sbjct: 526 agaaccaaaaacggt 540
>PTA.sd.6269.C1 nseq=3
Length = 3324
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 91 aacagaaacaaacag 105
|||||||||||||||
Sbjct: 3260 aacagaaacaaacag 3274
>PTA.sd.6189.C1 nseq=3
Length = 1893
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 269 aaaacggttacagaa 283
|||||||||||||||
Sbjct: 689 aaaacggttacagaa 703
>PTA.sd.6060.C1 nseq=12
Length = 1608
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 30 gctcttcttcacttg 44
|||||||||||||||
Sbjct: 656 gctcttcttcacttg 642
>PTA.sd.5675.C1 nseq=4
Length = 2401
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 80 caagaagctgcaaca 94
|||||||||||||||
Sbjct: 1868 caagaagctgcaaca 1882
>PTA.sd.5495.C1 nseq=2
Length = 2369
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 83 gaagctgcaacagaa 97
|||||||||||||||
Sbjct: 2121 gaagctgcaacagaa 2135
>PTA.sd.4553.C1 nseq=7
Length = 1232
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 72 ctcctcttcaagaag 86
|||||||||||||||
Sbjct: 848 ctcctcttcaagaag 862
>PTA.sd.4325.C1 nseq=37
Length = 1840
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 258 atgcagaaccaaaaa 272
|||||||||||||||
Sbjct: 1725 atgcagaaccaaaaa 1711
>PTA.sd.3875.C1 nseq=9
Length = 2091
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 150 tgcaagaacctgctt 164
|||||||||||||||
Sbjct: 1416 tgcaagaacctgctt 1402
>PTA.sd.36.C1 nseq=9
Length = 2155
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 32 tcttcttcacttgct 46
|||||||||||||||
Sbjct: 1088 tcttcttcacttgct 1074
>PTA.sd.2649.C1 nseq=3
Length = 1292
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 32 tcttcttcacttgct 46
|||||||||||||||
Sbjct: 82 tcttcttcacttgct 96
>PTA.sd.2401.C1 nseq=83
Length = 1245
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 90 caacagaaacaaaca 104
|||||||||||||||
Sbjct: 1120 caacagaaacaaaca 1106
>PTA.sd.2044.C1 nseq=5
Length = 1913
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 124 tgcagaatcaacaac 138
|||||||||||||||
Sbjct: 1610 tgcagaatcaacaac 1624
>PTA.sd.17517.C1 nseq=10
Length = 1806
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 158 cctgcttcaaatcag 172
|||||||||||||||
Sbjct: 192 cctgcttcaaatcag 206
>PTA.sd.16447.C1 nseq=2
Length = 1988
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 58 taatgctgatacttc 72
|||||||||||||||
Sbjct: 1553 taatgctgatacttc 1567
>PTA.sd.15952.C1 nseq=3
Length = 1804
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 63 ctgatacttctcctc 77
|||||||||||||||
Sbjct: 1547 ctgatacttctcctc 1533
>PTA.sd.15728.C1 nseq=4
Length = 2810
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 212 acaaagcctaatcca 226
|||||||||||||||
Sbjct: 2334 acaaagcctaatcca 2320
>PTA.sd.15702.C1 nseq=3
Length = 1358
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 80 caagaagctgcaaca 94
|||||||||||||||
Sbjct: 1090 caagaagctgcaaca 1104
>PTA.sd.15391.C1 nseq=6
Length = 1949
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 32 tcttcttcacttgct 46
|||||||||||||||
Sbjct: 447 tcttcttcacttgct 461
>PTA.sd.1508.C1 nseq=2
Length = 5378
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 69 cttctcctcttcaag 83
|||||||||||||||
Sbjct: 1002 cttctcctcttcaag 988
>PTA.sd.14877.C1 nseq=44
Length = 1301
Score = 30.2 bits (15), Expect = 8.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 85 agctgcaacagaaac 99
|||||||||||||||
Sbjct: 537 agctgcaacagaaac 523
Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722
Posted date: Jul 22, 2004 10:20 PM
Number of letters in database: 39,126,732
Number of sequences in database: 26,637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 296
length of database: 39,126,732
effective HSP length: 16
effective length of query: 280
effective length of database: 38,700,540
effective search space: 10836151200
effective search space used: 10836151200
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)