BLASTN 1.5.4-Paracel [2003-06-05]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ARI3_14592
         (297 letters)

Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722 
           26,637 sequences; 39,126,732 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PTA.sd.17401.C1 nseq=7                                                589   e-168
PTA.sd.12351.C1 nseq=15                                                38   0.035
PTA.sd.11701.C1 nseq=26                                                34   0.55 
At5g17940.F                                                            32   2.2  
At3g12420.F                                                            32   2.2  
At5g58510.F PTA.sd.17369.singlet                                       30   8.6  
At4g27250.F PTA.sd.12807.singlet                                       30   8.6  
At4g16141.F PTA.sd.11968.singlet                                       30   8.6  
At4g13970.F PTA.sd.11793.singlet                                       30   8.6  
At1g69220.F PTA.sd.3820.singlet                                        30   8.6  
PTA.sd.7375.C1 nseq=10                                                 30   8.6  
PTA.sd.6135.C1 nseq=11                                                 30   8.6  
PTA.sd.5653.C1 nseq=12                                                 30   8.6  
PTA.sd.5382.C1 nseq=5                                                  30   8.6  
PTA.sd.5009.C1 nseq=8                                                  30   8.6  
>PTA.sd.17401.C1 nseq=7
          Length = 840

 Score =  589 bits (297), Expect = e-168
 Identities = 297/297 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttggattagggcgtgacgatatgttcttttggaaacaagtgggaaaagcattgctatgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gttggattagggcgtgacgatatgttcttttggaaacaagtgggaaaagcattgctatgc 251

                                                                       
Query: 61  acttacacaatctttggtatggcttggatttacaatgaaacgtctcctttaggttggtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 acttacacaatctttggtatggcttggatttacaatgaaacgtctcctttaggttggtgg 311

                                                                       
Query: 121 acgctgaagccaagaccaaaggaagagagagaattggctcatttgtatgagcggcgtgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 acgctgaagccaagaccaaaggaagagagagaattggctcatttgtatgagcggcgtgag 371

                                                                       
Query: 181 tttccttatcctggtgatacagaggctatggaggattttgttgcaaaggggggaatgatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tttccttatcctggtgatacagaggctatggaggattttgttgcaaaggggggaatgatt 431

                                                                    
Query: 241 ggtactgcaattggaccgaaaggaattgttgagtccgaaggtgaggctgataattac 297
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggtactgcaattggaccgaaaggaattgttgagtccgaaggtgaggctgataattac 488
>PTA.sd.12351.C1 nseq=15
          Length = 1336

 Score = 38.2 bits (19), Expect = 0.035
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 211 gaggattttgttgcaaagg 229
           |||||||||||||||||||
Sbjct: 683 gaggattttgttgcaaagg 701
>PTA.sd.11701.C1 nseq=26
          Length = 1211

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 277 gaaggtgaggctgataattac 297
           ||||||||| |||||||||||
Sbjct: 165 gaaggtgagactgataattac 185
>At5g17940.F
          Length = 1284

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 120 gacgctgaagccaaga 135
           ||||||||||||||||
Sbjct: 82  gacgctgaagccaaga 67
>At3g12420.F
          Length = 927

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 183 tccttatcctggtgat 198
           ||||||||||||||||
Sbjct: 498 tccttatcctggtgat 513
>At5g58510.F PTA.sd.17369.singlet
          Length = 2958

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 207  tatggaggattttgt 221
            |||||||||||||||
Sbjct: 1080 tatggaggattttgt 1094
>At4g27250.F PTA.sd.12807.singlet
          Length = 1218

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 140  aggaagagagagaat 154
            |||||||||||||||
Sbjct: 1061 aggaagagagagaat 1075
>At4g16141.F PTA.sd.11968.singlet
          Length = 681

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 201 agaggctatggagga 215
           |||||||||||||||
Sbjct: 611 agaggctatggagga 625
>At4g13970.F PTA.sd.11793.singlet
          Length = 2028

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 209  tggaggattttgttg 223
            |||||||||||||||
Sbjct: 1136 tggaggattttgttg 1150
>At1g69220.F PTA.sd.3820.singlet
          Length = 2511

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 214  gattttgttgcaaag 228
            |||||||||||||||
Sbjct: 1432 gattttgttgcaaag 1446
>PTA.sd.7375.C1 nseq=10
          Length = 2484

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 148  agagaattggctcat 162
            |||||||||||||||
Sbjct: 1007 agagaattggctcat 1021
>PTA.sd.6135.C1 nseq=11
          Length = 3237

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 197 atacagaggctatgg 211
           |||||||||||||||
Sbjct: 164 atacagaggctatgg 150
>PTA.sd.5653.C1 nseq=12
          Length = 1359

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 142 gaagagagagaattg 156
           |||||||||||||||
Sbjct: 507 gaagagagagaattg 521
>PTA.sd.5382.C1 nseq=5
          Length = 818

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 143 aagagagagaattgg 157
           |||||||||||||||
Sbjct: 709 aagagagagaattgg 723
>PTA.sd.5009.C1 nseq=8
          Length = 2258

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 28   ttttggaaacaagtg 42
            |||||||||||||||
Sbjct: 2198 ttttggaaacaagtg 2212
>PTA.sd.4870.C1 nseq=4
          Length = 985

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 28  ttttggaaacaagtg 42
           |||||||||||||||
Sbjct: 969 ttttggaaacaagtg 983
>PTA.sd.4486.C1 nseq=6
          Length = 1591

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 217 tttgttgcaaagggg 231
           |||||||||||||||
Sbjct: 577 tttgttgcaaagggg 591
>PTA.sd.3756.C1 nseq=2
          Length = 1101

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 68  caatctttggtatgg 82
           |||||||||||||||
Sbjct: 469 caatctttggtatgg 483
>PTA.sd.29.C1 nseq=6
          Length = 1688

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                              
Query: 197 atacagaggctatggagga 215
           |||| ||||||||||||||
Sbjct: 245 atacggaggctatggagga 227
>PTA.sd.2886.C1 nseq=6
          Length = 3239

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 133  agaccaaaggaagag 147
            |||||||||||||||
Sbjct: 2596 agaccaaaggaagag 2610
>PTA.sd.2736.C1 nseq=2
          Length = 1472

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 37  caagtgggaaaagca 51
           |||||||||||||||
Sbjct: 532 caagtgggaaaagca 518
>PTA.sd.2527.C1 nseq=4
          Length = 1650

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 215 attttgttgcaaagg 229
           |||||||||||||||
Sbjct: 497 attttgttgcaaagg 511
>PTA.sd.2046.C1 nseq=6
          Length = 1010

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 139 aaggaagagagagaa 153
           |||||||||||||||
Sbjct: 19  aaggaagagagagaa 5
>PTA.sd.1769.C1 nseq=2
          Length = 3793

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 276  cgaaggtgaggctga 290
            |||||||||||||||
Sbjct: 3016 cgaaggtgaggctga 3030
>PTA.sd.17261.C1 nseq=5
          Length = 2549

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 200  cagaggctatggagg 214
            |||||||||||||||
Sbjct: 2033 cagaggctatggagg 2047
>PTA.sd.16127.C1 nseq=2
          Length = 612

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 138 aaaggaagagagaga 152
           |||||||||||||||
Sbjct: 104 aaaggaagagagaga 90
>PTA.sd.16114.C1 nseq=22
          Length = 1977

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 131  caagaccaaaggaag 145
            |||||||||||||||
Sbjct: 1883 caagaccaaaggaag 1869
>PTA.sd.1601.C1 nseq=4
          Length = 2066

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 266  ttgttgagtccgaag 280
            |||||||||||||||
Sbjct: 1780 ttgttgagtccgaag 1766
>PTA.sd.15368.C1 nseq=3
          Length = 1630

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 141  ggaagagagagaatt 155
            |||||||||||||||
Sbjct: 1383 ggaagagagagaatt 1397
>PTA.sd.15204.C1 nseq=9
          Length = 1732

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 101 cgtctcctttaggtt 115
           |||||||||||||||
Sbjct: 881 cgtctcctttaggtt 867
>PTA.sd.14769.C1 nseq=8
          Length = 1575

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 34  aaacaagtgggaaaagcat 52
           |||||| ||||||||||||
Sbjct: 325 aaacaaatgggaaaagcat 343
>PTA.sd.14288.C1 nseq=7
          Length = 2375

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 143 aagagagagaattgg 157
           |||||||||||||||
Sbjct: 57  aagagagagaattgg 43
>PTA.sd.13894.C1 nseq=4
          Length = 1486

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 153  attggctcatttgta 167
            |||||||||||||||
Sbjct: 1341 attggctcatttgta 1355
>PTA.sd.12798.C1 nseq=8
          Length = 1178

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 23  tgttcttttggaaac 37
           |||||||||||||||
Sbjct: 105 tgttcttttggaaac 119
>PTA.sd.11990.C1 nseq=2
          Length = 729

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 211 gaggattttgttgca 225
           |||||||||||||||
Sbjct: 199 gaggattttgttgca 185
>PTA.sd.11513.C1 nseq=9
          Length = 1390

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 139 aaggaagagagagaa 153
           |||||||||||||||
Sbjct: 798 aaggaagagagagaa 812
>PTA.sd.11325.C1 nseq=3
          Length = 2092

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 25  ttcttttggaaacaa 39
           |||||||||||||||
Sbjct: 290 ttcttttggaaacaa 304
>PTA.sd.11003.C1 nseq=59
          Length = 1048

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 127 aagccaagaccaaag 141
           |||||||||||||||
Sbjct: 790 aagccaagaccaaag 804
>PTA.sd.10042.C1 nseq=6
          Length = 2117

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 142 gaagagagagaattg 156
           |||||||||||||||
Sbjct: 451 gaagagagagaattg 437
>At5g36020.F
          Length = 2166

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 207  tatggaggattttgt 221
            |||||||||||||||
Sbjct: 1416 tatggaggattttgt 1430
>At4g20810.F
          Length = 1251

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 173 ggcgtgagtttcctt 187
           |||||||||||||||
Sbjct: 854 ggcgtgagtttcctt 840
>At4g19320.F
          Length = 2166

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 207  tatggaggattttgt 221
            |||||||||||||||
Sbjct: 1416 tatggaggattttgt 1430
>At3g19060.F
          Length = 4944

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 192 tggtgatacagaggc 206
           |||||||||||||||
Sbjct: 198 tggtgatacagaggc 212
>At2g25390.F
          Length = 405

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 232 ggaatgattggtact 246
           |||||||||||||||
Sbjct: 190 ggaatgattggtact 204
>At2g13930.F
          Length = 4008

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 143 aagagagagaattggctca 161
           |||||||||||||| ||||
Sbjct: 521 aagagagagaattgtctca 539
>At1g63850.F
          Length = 1647

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 28  ttttggaaacaagtg 42
           |||||||||||||||
Sbjct: 991 ttttggaaacaagtg 977
>At1g35760.F
          Length = 2814

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 1    gttggattagggcgt 15
            |||||||||||||||
Sbjct: 1546 gttggattagggcgt 1532
>At1g22000.F
          Length = 2184

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 201  agaggctatggagga 215
            |||||||||||||||
Sbjct: 1180 agaggctatggagga 1194
>At1g08150.F
          Length = 2448

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 259  aaaggaattgttgag 273
            |||||||||||||||
Sbjct: 1276 aaaggaattgttgag 1290
  Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722
    Posted date:  Jul 22, 2004 10:20 PM
  Number of letters in database: 39,126,732
  Number of sequences in database:  26,637
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 297
length of database: 39,126,732
effective HSP length: 16
effective length of query: 281
effective length of database: 38,700,540
effective search space: 10874851740
effective search space used: 10874851740
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)