BLASTN 1.5.4-Paracel [2003-06-05]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ARI3_14546
         (295 letters)

Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722 
           26,637 sequences; 39,126,732 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PTA.sd.9613.C1 nseq=2                                                 571   e-162
PTA.sd.7385.C1 nseq=5                                                  36   0.14 
PTA.sd.10981.C1 nseq=2                                                 36   0.14 
PTA.sd.641.C2 nseq=5                                                   34   0.55 
PTA.sd.15511.C1 nseq=11                                                34   0.55 
At4g24650.F                                                            34   0.55 
At4g08660.F                                                            34   0.55 
At4g05210.F PTA.sd.11391.singlet                                       32   2.2  
PTA.sd.9250.C1 nseq=3                                                  32   2.2  
PTA.sd.7994.C1 nseq=2                                                  32   2.2  
PTA.sd.3208.C1 nseq=2                                                  32   2.2  
PTA.sd.17402.C1 nseq=16                                                32   2.2  
PTA.sd.17335.C1 nseq=9                                                 32   2.2  
PTA.sd.16930.C1 nseq=11                                                32   2.2  
PTA.sd.1510.C1 nseq=15                                                 32   2.2  
>PTA.sd.9613.C1 nseq=2
          Length = 468

 Score =  571 bits (288), Expect = e-162
 Identities = 295/296 (99%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgaatacctccgttacctccactacttggattcacggagcaatcatggagtcaacacgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cgaatacctccgttacctccactacttggattcacggagcaatcatggagtcaacacgtt 178

                                                                       
Query: 61  tggatcttacgatgaaatctttggtctagttctcggtaattcatcctcttgtacgcggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tggatcttacgatgaaatctttggtctagttctcggtaattcatcctcttgtacgcggtg 238

                                                                       
Query: 121 gcttaacgcaggggaggaacttccggtggtggag-tttacggctgaggaaatgatggaga 179
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 239 gcttaacgcaggggaggaacttccggtggtggagttttacggctgaggaaatgatggaga 298

                                                                       
Query: 180 gaggtttagtggtttgtgctatatgtagagaggagcttgctgctaatgagaggctctcag 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gaggtttagtggtttgtgctatatgtagagaggagcttgctgctaatgagaggctctcag 358

                                                                   
Query: 240 agcttccttgtcggcattattaccataaagagtgtatctcgaattggttgagtaat 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agcttccttgtcggcattattaccataaagagtgtatctcgaattggttgagtaat 414
>PTA.sd.7385.C1 nseq=5
          Length = 1235

 Score = 36.2 bits (18), Expect = 0.14
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 149 gtggagtttacggctgag 166
           ||||||||||||||||||
Sbjct: 415 gtggagtttacggctgag 398
>PTA.sd.10981.C1 nseq=2
          Length = 1246

 Score = 36.2 bits (18), Expect = 0.14
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 149 gtggagtttacggctgag 166
           ||||||||||||||||||
Sbjct: 351 gtggagtttacggctgag 334
>PTA.sd.641.C2 nseq=5
          Length = 1832

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 161  gctgaggaaatgatgga 177
            |||||||||||||||||
Sbjct: 1345 gctgaggaaatgatgga 1329
>PTA.sd.15511.C1 nseq=11
          Length = 973

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                
Query: 136 ggaacttccggtggtggagtt 156
           ||||||||||||| |||||||
Sbjct: 236 ggaacttccggtgttggagtt 216
>At4g24650.F
          Length = 957

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 56  acgtttggatcttacgatgaa 76
           |||||||||||||| ||||||
Sbjct: 468 acgtttggatcttatgatgaa 488
>At4g08660.F
          Length = 2145

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 149 gtggagtttacggctga 165
           |||||||||||||||||
Sbjct: 316 gtggagtttacggctga 332
>At4g05210.F PTA.sd.11391.singlet
          Length = 900

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 13  ttacctccactacttg 28
           ||||||||||||||||
Sbjct: 224 ttacctccactacttg 209
>PTA.sd.9250.C1 nseq=3
          Length = 1739

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 7    cctccgttacctccac 22
            ||||||||||||||||
Sbjct: 1252 cctccgttacctccac 1267
>PTA.sd.7994.C1 nseq=2
          Length = 3084

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 164  gaggaaatgatggaga 179
            ||||||||||||||||
Sbjct: 2173 gaggaaatgatggaga 2188
>PTA.sd.3208.C1 nseq=2
          Length = 1354

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                
Query: 16   cctccactacttggattcac 35
            ||||||||||||| ||||||
Sbjct: 1242 cctccactacttgaattcac 1223
>PTA.sd.17402.C1 nseq=16
          Length = 2167

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 21   actacttggattcacg 36
            ||||||||||||||||
Sbjct: 1133 actacttggattcacg 1148
>PTA.sd.17335.C1 nseq=9
          Length = 2423

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                               
Query: 199 tatatgtagagaggagcttg 218
           |||||||||||| |||||||
Sbjct: 244 tatatgtagagaagagcttg 225
>PTA.sd.16930.C1 nseq=11
          Length = 1720

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 168 aaatgatggagagagg 183
           ||||||||||||||||
Sbjct: 490 aaatgatggagagagg 475
>PTA.sd.1510.C1 nseq=15
          Length = 1981

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 162 ctgaggaaatgatgga 177
           ||||||||||||||||
Sbjct: 567 ctgaggaaatgatgga 582
>PTA.sd.11370.C1 nseq=12
          Length = 2840

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 167  gaaatgatggagagag 182
            ||||||||||||||||
Sbjct: 2644 gaaatgatggagagag 2659
>At5g18180.F
          Length = 570

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 71  gatgaaatctttggtc 86
           ||||||||||||||||
Sbjct: 259 gatgaaatctttggtc 274
>At2g26050.F
          Length = 666

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 166 ggaaatgatggagaga 181
           ||||||||||||||||
Sbjct: 420 ggaaatgatggagaga 435
>At1g31840.F
          Length = 2538

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 171 tgatggagagaggttt 186
           ||||||||||||||||
Sbjct: 728 tgatggagagaggttt 743
>At1g53870.F PTA.sd.2910.singlet
          Length = 711

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 71  gatgaaatctttggt 85
           |||||||||||||||
Sbjct: 105 gatgaaatctttggt 119
>PTA.sd.982.C1 nseq=12
          Length = 2412

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 73   tgaaatctttggtct 87
            |||||||||||||||
Sbjct: 2272 tgaaatctttggtct 2258
>PTA.sd.9608.C1 nseq=8
          Length = 1721

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 221 gctaatgagaggctc 235
           |||||||||||||||
Sbjct: 462 gctaatgagaggctc 476
>PTA.sd.8348.C1 nseq=10
          Length = 1453

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 138 aacttccggtggtgg 152
           |||||||||||||||
Sbjct: 947 aacttccggtggtgg 961
>PTA.sd.8117.C1 nseq=2
          Length = 1218

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 165 aggaaatgatggaga 179
           |||||||||||||||
Sbjct: 711 aggaaatgatggaga 725
>PTA.sd.7500.C1 nseq=5
          Length = 1513

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                         
Query: 82 tggtctagttctcgg 96
          |||||||||||||||
Sbjct: 98 tggtctagttctcgg 84
>PTA.sd.7288.C1 nseq=22
          Length = 590

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 97  taattcatcctcttg 111
           |||||||||||||||
Sbjct: 326 taattcatcctcttg 340
>PTA.sd.7261.C1 nseq=10
          Length = 3989

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                               
Query: 66   cttacgatgaaatctttgg 84
            ||||||| |||||||||||
Sbjct: 1070 cttacgaggaaatctttgg 1052
>PTA.sd.668.C1 nseq=28
          Length = 3739

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 182  ggtttagtggtttgt 196
            |||||||||||||||
Sbjct: 1227 ggtttagtggtttgt 1241
>PTA.sd.3940.C1 nseq=13
          Length = 5086

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 140 cttccggtggtggag 154
           |||||||||||||||
Sbjct: 694 cttccggtggtggag 680
>PTA.sd.3791.C1 nseq=7
          Length = 3645

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 117  ggtggcttaacgcag 131
            |||||||||||||||
Sbjct: 2128 ggtggcttaacgcag 2142
>PTA.sd.2449.C1 nseq=10
          Length = 3396

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 182 ggtttagtggtttgt 196
           |||||||||||||||
Sbjct: 590 ggtttagtggtttgt 604
>PTA.sd.2198.C1 nseq=4
          Length = 728

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 199 tatatgtagagagga 213
           |||||||||||||||
Sbjct: 602 tatatgtagagagga 588
>PTA.sd.216.C1 nseq=3
          Length = 2320

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 252  ggcattattaccata 266
            |||||||||||||||
Sbjct: 1390 ggcattattaccata 1376
>PTA.sd.17064.C1 nseq=5
          Length = 832

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 137 gaacttccggtggtg 151
           |||||||||||||||
Sbjct: 539 gaacttccggtggtg 553
>PTA.sd.16592.C1 nseq=5
          Length = 1365

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 77   atctttggtctagtt 91
            |||||||||||||||
Sbjct: 1282 atctttggtctagtt 1296
>PTA.sd.16510.C1 nseq=2
          Length = 3747

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 187  agtggtttgtgctat 201
            |||||||||||||||
Sbjct: 2722 agtggtttgtgctat 2736
>PTA.sd.16386.C1 nseq=7
          Length = 1985

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 148 ggtggagtttacggc 162
           |||||||||||||||
Sbjct: 328 ggtggagtttacggc 314
>PTA.sd.16352.C1 nseq=11
          Length = 5224

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 218  gctgctaatgagagg 232
            |||||||||||||||
Sbjct: 1303 gctgctaatgagagg 1317
>PTA.sd.16345.C1 nseq=10
          Length = 2175

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 168  aaatgatggagagag 182
            |||||||||||||||
Sbjct: 1844 aaatgatggagagag 1858
>PTA.sd.15742.C1 nseq=14
          Length = 1860

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 100 ttcatcctcttgtac 114
           |||||||||||||||
Sbjct: 960 ttcatcctcttgtac 946
>PTA.sd.13644.C1 nseq=11
          Length = 1815

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 41  aatcatggagtcaac 55
           |||||||||||||||
Sbjct: 525 aatcatggagtcaac 511
>PTA.sd.13494.C1 nseq=8
          Length = 874

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 140 cttccggtggtggag 154
           |||||||||||||||
Sbjct: 164 cttccggtggtggag 150
>PTA.sd.12804.C1 nseq=2
          Length = 2401

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                               
Query: 232  gctctcagagcttccttgt 250
            ||||||| |||||||||||
Sbjct: 1628 gctctcacagcttccttgt 1610
>PTA.sd.11798.C1 nseq=6
          Length = 523

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 140 cttccggtggtggag 154
           |||||||||||||||
Sbjct: 282 cttccggtggtggag 296
>PTA.sd.1035.C1 nseq=2
          Length = 1344

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                               
Query: 207  gagaggagcttgctgctaa 225
            ||||||||||| |||||||
Sbjct: 1201 gagaggagcttcctgctaa 1219
>At5g60870.F
          Length = 1272

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 115 gcggtggcttaacgc 129
           |||||||||||||||
Sbjct: 21  gcggtggcttaacgc 7
>At4g24580.F
          Length = 2373

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 28   ggattcacggagcaa 42
            |||||||||||||||
Sbjct: 2022 ggattcacggagcaa 2036
>At3g54830.F
          Length = 1716

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 162  ctgaggaaatgatgg 176
            |||||||||||||||
Sbjct: 1603 ctgaggaaatgatgg 1589
>At3g19060.F
          Length = 4944

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 209  gaggagcttgctgct 223
            |||||||||||||||
Sbjct: 4804 gaggagcttgctgct 4818
>At2g34400.F
          Length = 1854

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 233  ctctcagagcttcct 247
            |||||||||||||||
Sbjct: 1159 ctctcagagcttcct 1145
  Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722
    Posted date:  Jul 22, 2004 10:20 PM
  Number of letters in database: 39,126,732
  Number of sequences in database:  26,637
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 295
length of database: 39,126,732
effective HSP length: 16
effective length of query: 279
effective length of database: 38,700,540
effective search space: 10797450660
effective search space used: 10797450660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)