BLASTN 1.5.4-Paracel [2003-06-05]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ARI3_13662
         (296 letters)

Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722 
           26,637 sequences; 39,126,732 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g01340.F                                                           587   e-167
At4g01010.F                                                            46   1e-04
PTA.sd.9759.C1 nseq=22                                                 34   0.55 
PTA.sd.7298.C1 nseq=4                                                  34   0.55 
PTA.sd.7297.C1 nseq=10                                                 34   0.55 
At5g16180.F                                                            34   0.55 
At5g62600.F PTA.sd.17664.singlet                                       32   2.2  
PTA.sd.4857.C1 nseq=9                                                  32   2.2  
PTA.sd.4439.C2 nseq=13                                                 32   2.2  
PTA.sd.3161.C1 nseq=8                                                  32   2.2  
PTA.sd.17803.C1 nseq=11                                                32   2.2  
PTA.sd.16760.C1 nseq=6                                                 32   2.2  
PTA.sd.11519.C1 nseq=6                                                 32   2.2  
At3g48010.F                                                            32   2.2  
At2g26380.F                                                            32   2.2  
>At1g01340.F
          Length = 2121

 Score =  587 bits (296), Expect = e-167
 Identities = 296/296 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tcttttatacaagcagcgtggaggagatactgtcggaggaagttagccaagtcactacgc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1825 tcttttatacaagcagcgtggaggagatactgtcggaggaagttagccaagtcactacgc 1884

                                                                        
Query: 61   gatgaagaagatcgtctccgagaagcgctcgctagtcaagataaagaacacaatgctgca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 gatgaagaagatcgtctccgagaagcgctcgctagtcaagataaagaacacaatgctgca 1944

                                                                        
Query: 121  accgtgtcgtcgtccttgagccttggaggcgctctttacgcgtcgcgtttcgcatcaaac 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 accgtgtcgtcgtccttgagccttggaggcgctctttacgcgtcgcgtttcgcatcaaac 2004

                                                                        
Query: 181  gcgcttcacaatctgaggcacaatatctccaaccttcctcctcgctacactcttcctttg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2005 gcgcttcacaatctgaggcacaatatctccaaccttcctcctcgctacactcttcctttg 2064

                                                                    
Query: 241  ctacctcaaaaacccaccgagcctgacttcaccgccaatcatacaactgaccctta 296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 ctacctcaaaaacccaccgagcctgacttcaccgccaatcatacaactgaccctta 2120
>At4g01010.F
          Length = 2070

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 157  tacgcgtcgcgtttcgcatcaaacgcgcttcacaatctg 195
            ||||||||||| || || ||||||||||||| |||||||
Sbjct: 1963 tacgcgtcgcggtttgcttcaaacgcgcttcgcaatctg 2001

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 235  cctttgctacctcaaaaacccaccgagcctgacttca 271
            |||||||||||||  |||||| |||||||||| ||||
Sbjct: 2017 cctttgctacctcctaaaccctccgagcctgatttca 2053
>PTA.sd.9759.C1 nseq=22
          Length = 835

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 57  acgcgatgaagaagatc 73
           |||||||||||||||||
Sbjct: 410 acgcgatgaagaagatc 394
>PTA.sd.7298.C1 nseq=4
          Length = 2002

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 3    ttttatacaagcagcgtggaggaga 27
            ||||||||||||||| |||| ||||
Sbjct: 1623 ttttatacaagcagcatggaagaga 1647
>PTA.sd.7297.C1 nseq=10
          Length = 2415

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 3    ttttatacaagcagcgtggaggaga 27
            ||||||||||||||| |||| ||||
Sbjct: 2027 ttttatacaagcagcatggaagaga 2051
>At5g16180.F
          Length = 2157

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 59  gcgatgaagaagatcgt 75
           |||||||||||||||||
Sbjct: 394 gcgatgaagaagatcgt 410
>At5g62600.F PTA.sd.17664.singlet
          Length = 1719

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 190 aatctgaggcacaata 205
           ||||||||||||||||
Sbjct: 828 aatctgaggcacaata 813
>PTA.sd.4857.C1 nseq=9
          Length = 1875

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                          
Query: 66 agaagatcgtctccga 81
          ||||||||||||||||
Sbjct: 77 agaagatcgtctccga 92
>PTA.sd.4439.C2 nseq=13
          Length = 1649

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 23/24 (95%), Gaps = 1/24 (4%)
 Strand = Plus / Plus

                                    
Query: 19   tggaggagatactgtcggaggaag 42
            |||||||||| |||||||||||||
Sbjct: 1388 tggaggagat-ctgtcggaggaag 1410
>PTA.sd.3161.C1 nseq=8
          Length = 1042

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 56  tacgcgatgaagaaga 71
           ||||||||||||||||
Sbjct: 646 tacgcgatgaagaaga 661
>PTA.sd.17803.C1 nseq=11
          Length = 4146

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 61   gatgaagaagatcgtc 76
            ||||||||||||||||
Sbjct: 2370 gatgaagaagatcgtc 2385
>PTA.sd.16760.C1 nseq=6
          Length = 1802

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 218 ctcctcgctacactct 233
           ||||||||||||||||
Sbjct: 226 ctcctcgctacactct 211
>PTA.sd.11519.C1 nseq=6
          Length = 1467

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 18  gtggaggagatactgt 33
           ||||||||||||||||
Sbjct: 708 gtggaggagatactgt 723
>At3g48010.F
          Length = 2118

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 25/28 (89%)
 Strand = Plus / Plus

                                        
Query: 3    ttttatacaagcagcgtggaggagatac 30
            |||||||||||| || |||||| |||||
Sbjct: 1794 ttttatacaagctgcttggaggcgatac 1821
>At2g26380.F
          Length = 1443

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 118 gcaaccgtgtcgtcgt 133
           ||||||||||||||||
Sbjct: 215 gcaaccgtgtcgtcgt 230
>At1g54385.F
          Length = 1683

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 189 caatctgaggcacaat 204
           ||||||||||||||||
Sbjct: 247 caatctgaggcacaat 232
>At4g33280.F PTA.sd.13309.singlet
          Length = 1386

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 186 tcacaatctgaggca 200
           |||||||||||||||
Sbjct: 373 tcacaatctgaggca 359
>PTA.sd.9416.C1 nseq=6
          Length = 1299

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 64  gaagaagatcgtctc 78
           |||||||||||||||
Sbjct: 330 gaagaagatcgtctc 316
>PTA.sd.9146.C1 nseq=19
          Length = 1891

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 62   atgaagaagatcgtc 76
            |||||||||||||||
Sbjct: 1056 atgaagaagatcgtc 1070
>PTA.sd.9029.C1 nseq=6
          Length = 1685

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                              
Query: 277 aatcatacaactgaccctt 295
           |||||||||||||| ||||
Sbjct: 174 aatcatacaactgagcctt 156
>PTA.sd.854.C1 nseq=50
          Length = 2025

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 227 acactcttcctttgc 241
           |||||||||||||||
Sbjct: 224 acactcttcctttgc 238
>PTA.sd.8417.C1 nseq=8
          Length = 1968

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 110  acaatgctgcaaccg 124
            |||||||||||||||
Sbjct: 1592 acaatgctgcaaccg 1606
>PTA.sd.7957.C1 nseq=7
          Length = 865

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 187 cacaatctgaggcac 201
           |||||||||||||||
Sbjct: 254 cacaatctgaggcac 240
>PTA.sd.7938.C1 nseq=9
          Length = 1632

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 182 cgcttcacaatctga 196
           |||||||||||||||
Sbjct: 594 cgcttcacaatctga 608
>PTA.sd.7124.C1 nseq=12
          Length = 640

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 61  gatgaagaagatcgt 75
           |||||||||||||||
Sbjct: 364 gatgaagaagatcgt 378
>PTA.sd.594.C1 nseq=13
          Length = 1265

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 173 catcaaacgcgcttc 187
           |||||||||||||||
Sbjct: 119 catcaaacgcgcttc 133
>PTA.sd.4822.C1 nseq=11
          Length = 4098

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                         
Query: 19 tggaggagatactgt 33
          |||||||||||||||
Sbjct: 33 tggaggagatactgt 19
>PTA.sd.4792.C1 nseq=17
          Length = 647

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 59  gcgatgaagaagatc 73
           |||||||||||||||
Sbjct: 254 gcgatgaagaagatc 268
>PTA.sd.475.C1 nseq=2
          Length = 829

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 202 aatatctccaacctt 216
           |||||||||||||||
Sbjct: 719 aatatctccaacctt 733
>PTA.sd.4232.C1 nseq=6
          Length = 1990

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 127 tcgtcgtccttgagc 141
           |||||||||||||||
Sbjct: 25  tcgtcgtccttgagc 39
>PTA.sd.3874.C1 nseq=5
          Length = 2466

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 209  ccaaccttcctcctc 223
            |||||||||||||||
Sbjct: 2351 ccaaccttcctcctc 2337
>PTA.sd.3753.C1 nseq=2
          Length = 832

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 224 gctacactcttcctt 238
           |||||||||||||||
Sbjct: 109 gctacactcttcctt 123
>PTA.sd.3149.C1 nseq=4
          Length = 740

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                              
Query: 67  gaagatcgtctccgagaag 85
           ||||||| |||||||||||
Sbjct: 249 gaagatcttctccgagaag 231
>PTA.sd.3023.C1 nseq=28
          Length = 2087

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 110  acaatgctgcaaccg 124
            |||||||||||||||
Sbjct: 1734 acaatgctgcaaccg 1748
>PTA.sd.2765.C1 nseq=25
          Length = 1689

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                              
Query: 277 aatcatacaactgaccctt 295
           |||||||||||||| ||||
Sbjct: 170 aatcatacaactgagcctt 152
>PTA.sd.2583.C1 nseq=2
          Length = 819

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 169 ttcgcatcaaacgcg 183
           |||||||||||||||
Sbjct: 201 ttcgcatcaaacgcg 215
>PTA.sd.2226.C1 nseq=17
          Length = 2360

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 190 aatctgaggcacaat 204
           |||||||||||||||
Sbjct: 934 aatctgaggcacaat 948
>PTA.sd.2224.C1 nseq=3
          Length = 3874

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 215 ttcctcctcgctaca 229
           |||||||||||||||
Sbjct: 506 ttcctcctcgctaca 492
>PTA.sd.1852.C1 nseq=8
          Length = 2776

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 18  gtggaggagatactg 32
           |||||||||||||||
Sbjct: 701 gtggaggagatactg 687
>PTA.sd.17674.C1 nseq=7
          Length = 2225

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 63   tgaagaagatcgtct 77
            |||||||||||||||
Sbjct: 1328 tgaagaagatcgtct 1314
>PTA.sd.17465.C1 nseq=24
          Length = 2295

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 71   atcgtctccgagaag 85
            |||||||||||||||
Sbjct: 1592 atcgtctccgagaag 1578
>PTA.sd.17101.C1 nseq=5
          Length = 1417

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                               
Query: 56   tacgcgatgaagaagatcg 74
            |||||||||||| ||||||
Sbjct: 1101 tacgcgatgaaggagatcg 1119
>PTA.sd.14657.C1 nseq=38
          Length = 589

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 187 cacaatctgaggcac 201
           |||||||||||||||
Sbjct: 148 cacaatctgaggcac 162
>PTA.sd.13866.C1 nseq=10
          Length = 1499

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 19  tggaggagatactgt 33
           |||||||||||||||
Sbjct: 312 tggaggagatactgt 326
>PTA.sd.11080.C1 nseq=6
          Length = 1276

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 262 cctgacttcaccgcc 276
           |||||||||||||||
Sbjct: 313 cctgacttcaccgcc 299
>PTA.sd.11079.C1 nseq=9
          Length = 1395

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 262 cctgacttcaccgcc 276
           |||||||||||||||
Sbjct: 420 cctgacttcaccgcc 406
>PTA.sd.10741.C1 nseq=4
          Length = 2862

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                               
Query: 99   agataaagaacacaatgct 117
            |||| ||||||||||||||
Sbjct: 1947 agatgaagaacacaatgct 1965
>PTA.sd.10685.C1 nseq=9
          Length = 1598

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 59  gcgatgaagaagatc 73
           |||||||||||||||
Sbjct: 373 gcgatgaagaagatc 387
>PTA.sd.10458.C1 nseq=10
          Length = 1540

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 61  gatgaagaagatcgt 75
           |||||||||||||||
Sbjct: 111 gatgaagaagatcgt 97
>At5g61480.F
          Length = 3126

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 63   tgaagaagatcgtct 77
            |||||||||||||||
Sbjct: 2432 tgaagaagatcgtct 2418
  Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722
    Posted date:  Jul 22, 2004 10:20 PM
  Number of letters in database: 39,126,732
  Number of sequences in database:  26,637
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 296
length of database: 39,126,732
effective HSP length: 16
effective length of query: 280
effective length of database: 38,700,540
effective search space: 10836151200
effective search space used: 10836151200
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)