BLASTN 1.5.4-Paracel [2003-06-05]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ARI3_12300
         (294 letters)

Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722 
           26,637 sequences; 39,126,732 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g01030.F                                                           583   e-166
PTA.sd.8672.C1 nseq=2                                                  34   0.55 
PTA.sd.8587.C1 nseq=7                                                  34   0.55 
PTA.sd.7924.C1 nseq=6                                                  34   0.55 
PTA.sd.13683.C1 nseq=4                                                 34   0.55 
PTA.sd.13090.C1 nseq=4                                                 34   0.55 
At4g13080.F                                                            34   0.55 
At1g61630.F                                                            34   0.55 
At5g58480.F PTA.sd.17366.singlet                                       32   2.2  
PTA.sd.7114.C1 nseq=7                                                  32   2.2  
PTA.sd.7095.C1 nseq=3                                                  32   2.2  
PTA.sd.4180.C1 nseq=21                                                 32   2.2  
PTA.sd.4146.C1 nseq=5                                                  32   2.2  
PTA.sd.4019.C1 nseq=9                                                  32   2.2  
PTA.sd.296.C1 nseq=11                                                  32   2.2  
>At3g01030.F
          Length = 1062

 Score =  583 bits (294), Expect = e-166
 Identities = 294/294 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaatctatgaatcattacgaagagctctcttgcaactacggattgagggaaaacccgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 agaatctatgaatcattacgaagagctctcttgcaactacggattgagggaaaacccgaa 164

                                                                       
Query: 61  gaaaacccagaaatctttactcgatcatcgattctgtacgaggaggaggagaaataaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gaaaacccagaaatctttactcgatcatcgattctgtacgaggaggaggagaaataaaaa 224

                                                                       
Query: 121 gatcctgattcgatgcaaagaatgcgggaaagggtttctttacgagaaatgtctgtttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gatcctgattcgatgcaaagaatgcgggaaagggtttctttacgagaaatgtctgtttaa 284

                                                                       
Query: 181 tcatctccaagtgacgcattctgaagaatctacaagaagaagcctgttttgtaggtttag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tcatctccaagtgacgcattctgaagaatctacaagaagaagcctgttttgtaggtttag 344

                                                                 
Query: 241 tattgtgcagaggagaaaaagatcgaagagagtttccaggtacaagaagattct 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tattgtgcagaggagaaaaagatcgaagagagtttccaggtacaagaagattct 398
>PTA.sd.8672.C1 nseq=2
          Length = 1966

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 59  aagaaaacccagaaatc 75
           |||||||||||||||||
Sbjct: 542 aagaaaacccagaaatc 526
>PTA.sd.8587.C1 nseq=7
          Length = 1719

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 205 agaatctacaagaagaa 221
           |||||||||||||||||
Sbjct: 705 agaatctacaagaagaa 721
>PTA.sd.7924.C1 nseq=6
          Length = 971

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 20  gaagagctctcttgcaa 36
           |||||||||||||||||
Sbjct: 487 gaagagctctcttgcaa 503
>PTA.sd.13683.C1 nseq=4
          Length = 2022

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 247 gcagaggagaaaaagat 263
           |||||||||||||||||
Sbjct: 779 gcagaggagaaaaagat 763
>PTA.sd.13090.C1 nseq=4
          Length = 1110

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 174 tgtttaatcatctccaa 190
           |||||||||||||||||
Sbjct: 307 tgtttaatcatctccaa 291
>At4g13080.F
          Length = 888

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 2   gaatctatgaatcattacgaa 22
           ||||||| |||||||||||||
Sbjct: 220 gaatctaagaatcattacgaa 240
>At1g61630.F
          Length = 1254

 Score = 34.2 bits (17), Expect = 0.55
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 152 gggtttctttacgagaa 168
           |||||||||||||||||
Sbjct: 841 gggtttctttacgagaa 857
>At5g58480.F PTA.sd.17366.singlet
          Length = 1398

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 99  cgaggaggaggagaaa 114
           ||||||||||||||||
Sbjct: 31  cgaggaggaggagaaa 16
>PTA.sd.7114.C1 nseq=7
          Length = 1751

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 103 gaggaggagaaataaaaaga 122
           |||||||||||| |||||||
Sbjct: 64  gaggaggagaaacaaaaaga 83
>PTA.sd.7095.C1 nseq=3
          Length = 1393

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 100 gaggaggaggagaaat 115
           ||||||||||||||||
Sbjct: 308 gaggaggaggagaaat 293
>PTA.sd.4180.C1 nseq=21
          Length = 2652

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 196  gcattctgaagaatct 211
            ||||||||||||||||
Sbjct: 1863 gcattctgaagaatct 1848
>PTA.sd.4146.C1 nseq=5
          Length = 1614

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 213  caagaagaagcctgtt 228
            ||||||||||||||||
Sbjct: 1389 caagaagaagcctgtt 1374
>PTA.sd.4019.C1 nseq=9
          Length = 916

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 69  agaaatctttactcga 84
           ||||||||||||||||
Sbjct: 699 agaaatctttactcga 714
>PTA.sd.296.C1 nseq=11
          Length = 2142

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 199  ttctgaagaatctaca 214
            ||||||||||||||||
Sbjct: 1461 ttctgaagaatctaca 1446
>PTA.sd.16221.C1 nseq=2
          Length = 4273

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 154  gtttctttacgagaaa 169
            ||||||||||||||||
Sbjct: 2270 gtttctttacgagaaa 2255
>PTA.sd.15250.C1 nseq=2
          Length = 338

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 100 gaggaggaggagaaat 115
           ||||||||||||||||
Sbjct: 201 gaggaggaggagaaat 186
>PTA.sd.14393.C1 nseq=8
          Length = 3043

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 104  aggaggagaaataaaa 119
            ||||||||||||||||
Sbjct: 1757 aggaggagaaataaaa 1742
>PTA.sd.13247.C1 nseq=16
          Length = 1994

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 58  gaagaaaacccagaaa 73
           ||||||||||||||||
Sbjct: 141 gaagaaaacccagaaa 126
>PTA.sd.1260.C1 nseq=7
          Length = 3078

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 84   atcatcgattctgtac 99
            ||||||||||||||||
Sbjct: 2243 atcatcgattctgtac 2228
>PTA.sd.11586.C1 nseq=5
          Length = 3627

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 252  ggagaaaaagatcgaa 267
            ||||||||||||||||
Sbjct: 3299 ggagaaaaagatcgaa 3314
>At5g51520.F
          Length = 615

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 202 tgaagaatctacaaga 217
           ||||||||||||||||
Sbjct: 401 tgaagaatctacaaga 416
>At4g05140.F
          Length = 1260

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 92  ttctgtacgaggagga 107
           ||||||||||||||||
Sbjct: 390 ttctgtacgaggagga 405
>At4g01820.F
          Length = 3690

 Score = 32.2 bits (16), Expect = 2.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 243  ttgtgcagaggagaaa 258
            ||||||||||||||||
Sbjct: 2577 ttgtgcagaggagaaa 2592
>PTA.sd.9303.C1 nseq=15
          Length = 1182

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 256 aaaaagatcgaagag 270
           |||||||||||||||
Sbjct: 75  aaaaagatcgaagag 61
>PTA.sd.9232.C1 nseq=30
          Length = 2083

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 110  agaaataaaaagatc 124
            |||||||||||||||
Sbjct: 1940 agaaataaaaagatc 1926
>PTA.sd.9196.C1 nseq=6
          Length = 1751

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 58  gaagaaaacccagaa 72
           |||||||||||||||
Sbjct: 290 gaagaaaacccagaa 276
>PTA.sd.9043.C1 nseq=2
          Length = 750

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 211 tacaagaagaagcct 225
           |||||||||||||||
Sbjct: 199 tacaagaagaagcct 213
>PTA.sd.876.C1 nseq=8
          Length = 1535

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                              
Query: 23  gagctctcttgcaactacg 41
           ||||||||||||| |||||
Sbjct: 104 gagctctcttgcagctacg 86
>PTA.sd.6923.C1 nseq=18
          Length = 1797

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 100 gaggaggaggagaaa 114
           |||||||||||||||
Sbjct: 107 gaggaggaggagaaa 93
>PTA.sd.6758.C1 nseq=9
          Length = 5048

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 9    tgaatcattacgaag 23
            |||||||||||||||
Sbjct: 1248 tgaatcattacgaag 1262
>PTA.sd.5592.C1 nseq=5
          Length = 1129

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 100 gaggaggaggagaaa 114
           |||||||||||||||
Sbjct: 704 gaggaggaggagaaa 718
>PTA.sd.4725.C1 nseq=68
          Length = 1471

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 99  cgaggaggaggagaa 113
           |||||||||||||||
Sbjct: 200 cgaggaggaggagaa 186
>PTA.sd.396.C1 nseq=3
          Length = 931

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 99  cgaggaggaggagaa 113
           |||||||||||||||
Sbjct: 267 cgaggaggaggagaa 281
>PTA.sd.3893.C1 nseq=2
          Length = 2417

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 62  aaaacccagaaatct 76
           |||||||||||||||
Sbjct: 229 aaaacccagaaatct 215
>PTA.sd.3096.C1 nseq=7
          Length = 1366

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 248 cagaggagaaaaaga 262
           |||||||||||||||
Sbjct: 632 cagaggagaaaaaga 646
>PTA.sd.2876.C1 nseq=4
          Length = 1867

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                               
Query: 204  aagaatctacaagaagaag 222
            ||||| |||||||||||||
Sbjct: 1100 aagaagctacaagaagaag 1118
>PTA.sd.2686.C1 nseq=4
          Length = 1857

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 172 tctgtttaatcatct 186
           |||||||||||||||
Sbjct: 215 tctgtttaatcatct 201
>PTA.sd.2543.C1 nseq=7
          Length = 1385

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 132 gatgcaaagaatgcg 146
           |||||||||||||||
Sbjct: 275 gatgcaaagaatgcg 261
>PTA.sd.2445.C1 nseq=21
          Length = 1749

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 100 gaggaggaggagaaa 114
           |||||||||||||||
Sbjct: 238 gaggaggaggagaaa 252
>PTA.sd.2442.C1 nseq=23
          Length = 1333

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 279 ggtacaagaagattc 293
           |||||||||||||||
Sbjct: 959 ggtacaagaagattc 945
>PTA.sd.2428.C1 nseq=11
          Length = 2869

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 100  gaggaggaggagaaa 114
            |||||||||||||||
Sbjct: 2394 gaggaggaggagaaa 2408
>PTA.sd.2233.C1 nseq=37
          Length = 2561

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 232 taggtttagtattgt 246
           |||||||||||||||
Sbjct: 443 taggtttagtattgt 457
>PTA.sd.2226.C1 nseq=17
          Length = 2360

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 241 tattgtgcagaggag 255
           |||||||||||||||
Sbjct: 913 tattgtgcagaggag 927
>PTA.sd.200.C1 nseq=10
          Length = 1510

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 100 gaggaggaggagaaa 114
           |||||||||||||||
Sbjct: 203 gaggaggaggagaaa 189
>PTA.sd.1947.C1 nseq=4
          Length = 925

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                         
Query: 24 agctctcttgcaact 38
          |||||||||||||||
Sbjct: 77 agctctcttgcaact 63
>PTA.sd.1856.C1 nseq=3
          Length = 792

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 100 gaggaggaggagaaa 114
           |||||||||||||||
Sbjct: 369 gaggaggaggagaaa 355
>PTA.sd.17603.C1 nseq=44
          Length = 3553

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 242 attgtgcagaggaga 256
           |||||||||||||||
Sbjct: 40  attgtgcagaggaga 26
>PTA.sd.17070.C1 nseq=33
          Length = 1188

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 112  aaataaaaagatcct 126
            |||||||||||||||
Sbjct: 1149 aaataaaaagatcct 1163
>PTA.sd.1675.C1 nseq=6
          Length = 2149

 Score = 30.2 bits (15), Expect = 8.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 100 gaggaggaggagaaa 114
           |||||||||||||||
Sbjct: 662 gaggaggaggagaaa 676
  Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722
    Posted date:  Jul 22, 2004 10:20 PM
  Number of letters in database: 39,126,732
  Number of sequences in database:  26,637
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 294
length of database: 39,126,732
effective HSP length: 16
effective length of query: 278
effective length of database: 38,700,540
effective search space: 10758750120
effective search space used: 10758750120
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)