BLASTN 1.5.4-Paracel [2003-06-05]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ARI3_08922
         (291 letters)

Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722 
           26,637 sequences; 39,126,732 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g24030.F                                                           577   e-164
PTA.sd.9625.C1 nseq=3                                                  34   0.54 
PTA.sd.6542.C1 nseq=22                                                 34   0.54 
PTA.sd.17240.C1 nseq=12                                                34   0.54 
PTA.sd.11565.C1 nseq=7                                                 34   0.54 
At4g04240.F                                                            34   0.54 
At1g21520.F PTA.sd.1573.singlet                                        32   2.1  
PTA.sd.3011.C1 nseq=6                                                  32   2.1  
PTA.sd.17274.C1 nseq=21                                                32   2.1  
PTA.sd.13258.C1 nseq=4                                                 32   2.1  
PTA.sd.1047.C1 nseq=15                                                 32   2.1  
At2g06160.F                                                            32   2.1  
PTA.sd.7602.C1 nseq=5                                                  30   8.5  
PTA.sd.6992.C1 nseq=18                                                 30   8.5  
PTA.sd.6841.C1 nseq=13                                                 30   8.5  
>At4g24030.F
          Length = 387

 Score =  577 bits (291), Expect = e-164
 Identities = 291/291 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaggtggagagattgacgcaggcgcagcgttcgagggaggtgaagaaagcggatattac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  agaggtggagagattgacgcaggcgcagcgttcgagggaggtgaagaaagcggatattac 129

                                                                       
Query: 61  ggttgcgctgatccagctagcggcgtggtcgatcttttccatggaagtcgtcgtgctaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ggttgcgctgatccagctagcggcgtggtcgatcttttccatggaagtcgtcgtgctaac 189

                                                                       
Query: 121 gttggaggtgatgctgatgcttttgtccatggcttctggatccgattagcgtttcagaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gttggaggtgatgctgatgcttttgtccatggcttctggatccgattagcgtttcagaag 249

                                                                       
Query: 181 acgaccaagaaaagaagatcgtgggatggatcaatatattacaggaataacgattttgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acgaccaagaaaagaagatcgtgggatggatcaatatattacaggaataacgattttgaa 309

                                                              
Query: 241 ccgagaaaatgtaaatataagtatataaaacgattattgtttgtcagaaat 291
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ccgagaaaatgtaaatataagtatataaaacgattattgtttgtcagaaat 360
>PTA.sd.9625.C1 nseq=3
          Length = 2995

 Score = 34.2 bits (17), Expect = 0.54
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 42   tgaagaaagcggatatt 58
            |||||||||||||||||
Sbjct: 1796 tgaagaaagcggatatt 1812
>PTA.sd.6542.C1 nseq=22
          Length = 4278

 Score = 34.2 bits (17), Expect = 0.54
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 138 tgcttttgtccatggct 154
           |||||||||||||||||
Sbjct: 298 tgcttttgtccatggct 314
>PTA.sd.17240.C1 nseq=12
          Length = 1557

 Score = 34.2 bits (17), Expect = 0.54
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                           
Query: 1  agaggtggagagattga 17
          |||||||||||||||||
Sbjct: 56 agaggtggagagattga 40
>PTA.sd.11565.C1 nseq=7
          Length = 559

 Score = 34.2 bits (17), Expect = 0.54
 Identities = 26/29 (89%)
 Strand = Plus / Minus

                                        
Query: 129 tgatgctgatgcttttgtccatggcttct 157
           |||||||| |||| || ||||||||||||
Sbjct: 130 tgatgctgctgctgttatccatggcttct 102
>At4g04240.F
          Length = 1005

 Score = 34.2 bits (17), Expect = 0.54
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 138 tgcttttgtccatggct 154
           |||||||||||||||||
Sbjct: 691 tgcttttgtccatggct 675
>At1g21520.F PTA.sd.1573.singlet
          Length = 366

 Score = 32.2 bits (16), Expect = 2.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                          
Query: 34 gagggaggtgaagaaa 49
          ||||||||||||||||
Sbjct: 39 gagggaggtgaagaaa 54
>PTA.sd.3011.C1 nseq=6
          Length = 819

 Score = 32.2 bits (16), Expect = 2.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 175 cagaagacgaccaaga 190
           ||||||||||||||||
Sbjct: 355 cagaagacgaccaaga 340
>PTA.sd.17274.C1 nseq=21
          Length = 3226

 Score = 32.2 bits (16), Expect = 2.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 42   tgaagaaagcggatat 57
            ||||||||||||||||
Sbjct: 1837 tgaagaaagcggatat 1852
>PTA.sd.13258.C1 nseq=4
          Length = 2415

 Score = 32.2 bits (16), Expect = 2.1
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                               
Query: 34  gagggaggtgaagaaagcgg 53
           ||||||||||||||| ||||
Sbjct: 380 gagggaggtgaagaaggcgg 361
>PTA.sd.1047.C1 nseq=15
          Length = 1315

 Score = 32.2 bits (16), Expect = 2.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 184 accaagaaaagaagat 199
           ||||||||||||||||
Sbjct: 806 accaagaaaagaagat 821
>At2g06160.F
          Length = 2253

 Score = 32.2 bits (16), Expect = 2.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 132 tgctgatgcttttgtc 147
           ||||||||||||||||
Sbjct: 685 tgctgatgcttttgtc 670
>PTA.sd.7602.C1 nseq=5
          Length = 977

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 131 atgctgatgcttttg 145
           |||||||||||||||
Sbjct: 636 atgctgatgcttttg 650
>PTA.sd.6992.C1 nseq=18
          Length = 3343

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 187 aagaaaagaagatcg 201
           |||||||||||||||
Sbjct: 127 aagaaaagaagatcg 113
>PTA.sd.6841.C1 nseq=13
          Length = 932

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 145 gtccatggcttctgg 159
           |||||||||||||||
Sbjct: 189 gtccatggcttctgg 203
>PTA.sd.6833.C1 nseq=5
          Length = 1218

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 179 agacgaccaagaaaa 193
           |||||||||||||||
Sbjct: 655 agacgaccaagaaaa 641
>PTA.sd.6769.C1 nseq=13
          Length = 1612

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 148 catggcttctggatc 162
           |||||||||||||||
Sbjct: 109 catggcttctggatc 123
>PTA.sd.6345.C1 nseq=5
          Length = 1748

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 187 aagaaaagaagatcg 201
           |||||||||||||||
Sbjct: 179 aagaaaagaagatcg 193
>PTA.sd.5878.C1 nseq=55
          Length = 952

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                         
Query: 40 ggtgaagaaagcgga 54
          |||||||||||||||
Sbjct: 57 ggtgaagaaagcgga 43
>PTA.sd.5577.C1 nseq=28
          Length = 1516

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 142  tttgtccatggcttc 156
            |||||||||||||||
Sbjct: 1154 tttgtccatggcttc 1140
>PTA.sd.4880.C1 nseq=4
          Length = 1752

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 256 tataagtatataaaa 270
           |||||||||||||||
Sbjct: 345 tataagtatataaaa 359
>PTA.sd.4021.C1 nseq=18
          Length = 1844

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                               
Query: 121  gttggaggtgatgctgatg 139
            ||||||| |||||||||||
Sbjct: 1458 gttggagctgatgctgatg 1440
>PTA.sd.3982.C1 nseq=43
          Length = 1267

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 67  gctgatccagctagc 81
           |||||||||||||||
Sbjct: 356 gctgatccagctagc 342
>PTA.sd.2929.C1 nseq=42
          Length = 1797

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 176 agaagacgaccaaga 190
           |||||||||||||||
Sbjct: 438 agaagacgaccaaga 424
>PTA.sd.1751.C1 nseq=9
          Length = 3236

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 127  ggtgatgctgatgct 141
            |||||||||||||||
Sbjct: 1003 ggtgatgctgatgct 1017
>PTA.sd.16485.C2 nseq=20
          Length = 2412

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 94   cttttccatggaagt 108
            |||||||||||||||
Sbjct: 2120 cttttccatggaagt 2134
>PTA.sd.15620.C1 nseq=2
          Length = 2129

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 150  tggcttctggatccg 164
            |||||||||||||||
Sbjct: 1927 tggcttctggatccg 1941
>PTA.sd.15609.C1 nseq=5
          Length = 1001

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 228 taacgattttgaacc 242
           |||||||||||||||
Sbjct: 427 taacgattttgaacc 413
>PTA.sd.15291.C1 nseq=25
          Length = 902

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 182 cgaccaagaaaagaa 196
           |||||||||||||||
Sbjct: 71  cgaccaagaaaagaa 85
>PTA.sd.13869.C1 nseq=10
          Length = 2727

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 38  gaggtgaagaaagcg 52
           |||||||||||||||
Sbjct: 434 gaggtgaagaaagcg 448
>PTA.sd.13141.C1 nseq=3
          Length = 2857

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 127 ggtgatgctgatgct 141
           |||||||||||||||
Sbjct: 82  ggtgatgctgatgct 96
>PTA.sd.12785.C1 nseq=35
          Length = 3329

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                              
Query: 192 aagaagatcgtgggatgga 210
           ||||||||||||| |||||
Sbjct: 62  aagaagatcgtggaatgga 44
>PTA.sd.12290.C1 nseq=2
          Length = 1171

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 178  aagacgaccaagaaa 192
            |||||||||||||||
Sbjct: 1140 aagacgaccaagaaa 1154
>PTA.sd.12253.C1 nseq=5
          Length = 1483

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 171  gtttcagaagacgac 185
            |||||||||||||||
Sbjct: 1088 gtttcagaagacgac 1102
>PTA.sd.1225.C1 nseq=6
          Length = 2968

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 123  tggaggtgatgctga 137
            |||||||||||||||
Sbjct: 2499 tggaggtgatgctga 2485
>PTA.sd.10606.C1 nseq=103
          Length = 2762

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 66   cgctgatccagctag 80
            |||||||||||||||
Sbjct: 1852 cgctgatccagctag 1866
>PTA.sd.10001.C1 nseq=10
          Length = 5448

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                               
Query: 129  tgatgctgatgcttttgtc 147
            |||| ||||||||||||||
Sbjct: 2437 tgattctgatgcttttgtc 2455
>At5g42840.F
          Length = 2016

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 95   ttttccatggaagtc 109
            |||||||||||||||
Sbjct: 1448 ttttccatggaagtc 1462
>At5g16690.F
          Length = 1671

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 248  aatgtaaatataagt 262
            |||||||||||||||
Sbjct: 1654 aatgtaaatataagt 1640
>At4g28000.F
          Length = 2181

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 213  aatatattacaggaa 227
            |||||||||||||||
Sbjct: 1093 aatatattacaggaa 1107
>At4g13600.F
          Length = 771

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 239 aaccgagaaaatgta 253
           |||||||||||||||
Sbjct: 486 aaccgagaaaatgta 472
>At3g56530.F
          Length = 960

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 182 cgaccaagaaaagaa 196
           |||||||||||||||
Sbjct: 138 cgaccaagaaaagaa 124
>At1g55440.F
          Length = 1962

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 127 ggtgatgctgatgct 141
           |||||||||||||||
Sbjct: 412 ggtgatgctgatgct 426
>At1g06910.F
          Length = 1173

 Score = 30.2 bits (15), Expect = 8.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 176 agaagacgaccaaga 190
           |||||||||||||||
Sbjct: 570 agaagacgaccaaga 584
  Database: bm_kusatsu/ando/Fullchip/DGC3/DB/DGCDB_040722
    Posted date:  Jul 22, 2004 10:20 PM
  Number of letters in database: 39,126,732
  Number of sequences in database:  26,637
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 291
length of database: 39,126,732
effective HSP length: 16
effective length of query: 275
effective length of database: 38,700,540
effective search space: 10642648500
effective search space used: 10642648500
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)