BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BE037796.f
(1318 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_181418.1| RIKEN cDNA 4933433J03 [Mus musculus]|gi|25... 55 2e-06
emb|CAA49544.1| HRPII [Plasmodium falciparum] 53 9e-06
sp|P05227|HRP1_PLAFA HISTIDINE-RICH PROTEIN PRECURSOR (CLON... 52 2e-05
pir||A25942 histidine/alanine-rich protein II - malaria par... 52 2e-05
ref|XP_221192.1| similar to gamete-specific homeodomain pro... 51 3e-05
>ref|XP_181418.1| RIKEN cDNA 4933433J03 [Mus musculus]|gi|25055945|ref|XP_204186.1|
RIKEN cDNA 4933433J03 [Mus musculus]
Length = 270
Score = 55.1 bits (131), Expect = 2e-06
Identities = 59/217 (27%), Positives = 79/217 (36%), Gaps = 3/217 (1%)
Frame = +2
Query: 581 AAPTRHPHHDRHSDDAEHLRNTEHTTGSPHSTRHCTXRAHRRSTQTSTHSHESYDHTPPA 760
AA TR P RHS A + G+ R +H ST TS S + TP
Sbjct: 38 AAMTRQPFQARHSSSATAGQAHYRRRGTAAKPRQAQHGSHSLST-TSRQSQHTRHITPST 96
Query: 761 DRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQTRSRDTRVMRHTDHSTCK 940
+ AQHT H + Q TR R R QT R H HST
Sbjct: 97 THQ-----AQHTGHTKPGKPYQAQHTRQSKPGEARQRHHTRQTTPATPRQSHHARHSTSG 151
Query: 941 XXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRLSTP--RHHSVHERDRRK- 1111
H AH A R + + P+ A+ T+ +TP H H R R
Sbjct: 152 TANQRHHSRPSTSSTAHQAHQA---RHSMPSLPH-KAQDTKHNTPGTTHKPQHARHRMPG 207
Query: 1112 LHHQ*RXTRTSTDTLPTRQRESDAATHATPPAEYGQR 1222
L H+ + T+ +T T + H+T A+ +R
Sbjct: 208 LPHKAQDTKHNTP--GTTHKPQHTRHHSTGTAQLARR 242
Score = 37.4 bits (85), Expect = 0.52
Identities = 39/151 (25%), Positives = 53/151 (34%), Gaps = 2/151 (1%)
Frame = +2
Query: 485 TRP-RPPSAPHXXXXXXXXXXXAHNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHTTG 661
T+P +P A H H+ + Q +P A R HH RHS H+
Sbjct: 106 TKPGKPYQAQHTRQSKPGEARQRHH-TRQTTP--ATPRQSHHARHSTSGT-ANQRHHSRP 161
Query: 662 SPHSTRHCTXRAHRRSTQTSTHSHESYDHTPPADRRHGRAH-AQHTHHIETDDGAATQDT 838
S ST H +A R S + H + H P G H QH H QDT
Sbjct: 162 STSSTAHQAHQA-RHSMPSLPHKAQDTKHNTP-----GTTHKPQHARHRMPGLPHKAQDT 215
Query: 839 RHRDERAQRDRQPRTQTRSRDTRVMRHTDHS 931
+H Q + ++ R T H+
Sbjct: 216 KHNTPGTTHKPQHTRHHSTGTAQLARRTRHN 246
>emb|CAA49544.1| HRPII [Plasmodium falciparum]
Length = 430
Score = 53.1 bits (126), Expect = 9e-06
Identities = 42/198 (21%), Positives = 53/198 (26%), Gaps = 7/198 (3%)
Frame = +2
Query: 548 AHNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHT--TGSPHSTRHCTXRAHRRSTQTS 721
AH A + A H HH + A H+ + H H H H +
Sbjct: 29 AHVDDAHHAHHVADAHHAHHVADAHHAHHVADAHHAHHVADAHHAHHAADAHHAHHAADA 88
Query: 722 THSHES-----YDHTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQ 886
H+H + H A H A+A H HH TD A D D
Sbjct: 89 HHAHHAAYAHHAHHAAYAHHAHHAAYAHHAHH-ATDAHHAADAHHAADAHHAADAHHAAD 147
Query: 887 TRSRDTRVMRHTDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRL 1066
H H DAH A A +A
Sbjct: 148 AHHAHHAAYAHHAHHAADAHHATDAHHAADAHHATDAHHAADAHHAADAHHAADAHHAHH 207
Query: 1067 STPRHHSVHERDRRKLHH 1120
+ HH+ H D HH
Sbjct: 208 AADAHHAHHAADAHHAHH 225
Score = 52.0 bits (123), Expect = 2e-05
Identities = 41/187 (21%), Positives = 55/187 (28%), Gaps = 7/187 (3%)
Frame = +2
Query: 581 AAPTRHPHHDRHSDDAEHLRNTEHTTGSPHS--TRHCTXRAHRRSTQTSTHSHESYD--- 745
AA H HH ++ A H + H T + H+ H T H + +H + D
Sbjct: 145 AADAHHAHHAAYAHHAHHAADAHHATDAHHAADAHHATDAHHAADAHHAADAHHAADAHH 204
Query: 746 --HTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQTRSRDTRVMRH 919
H A H A A H HH AA H A + D +
Sbjct: 205 AHHAADAHHAHHAADAHHAHH------AADAHHAHHAAYAHHAHHASDAHHAADAHHAAY 258
Query: 920 TDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRLSTPRHHSVHER 1099
H+ DAH A A +A + HH+ H
Sbjct: 259 AHHA----HHAADAHHAADAHHATDAHHAADAHHAADAHHAADAHHAHHAADAHHAHHAA 314
Query: 1100 DRRKLHH 1120
D HH
Sbjct: 315 DAHHAHH 321
Score = 47.8 bits (112), Expect = 4e-04
Identities = 41/205 (20%), Positives = 52/205 (25%), Gaps = 2/205 (0%)
Frame = +2
Query: 512 HXXXXXXXXXXXAHNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHTTGSPHSTRHCTX 691
H H A + A HH H+ DA H H H H
Sbjct: 173 HHAADAHHATDAHHAADAHHAADAHHAADAHHAHHAADAHH----AHHAADAHHAHHAAD 228
Query: 692 RAHRRSTQTSTHSHESYDHTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDR 871
H + H+H + D AD H A+A H HH AA A
Sbjct: 229 AHHAHHAAYAHHAHHASDAHHAADAHHA-AYAHHAHHAADAHHAADAHHATDAHHAADAH 287
Query: 872 QPRTQTRSRDTRVMRHT--DHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNT 1045
+ D H H H A AH A+
Sbjct: 288 HAADAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHASDAHHAA 347
Query: 1046 NARRTRLSTPRHHSVHERDRRKLHH 1120
+A + HH+ HH
Sbjct: 348 DAHHAAYAHHAHHAADAHHAADAHH 372
Score = 47.0 bits (110), Expect = 7e-04
Identities = 41/202 (20%), Positives = 54/202 (26%), Gaps = 12/202 (5%)
Frame = +2
Query: 551 HNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHT--TGSPHSTRHCTXRAHRRSTQTST 724
H A + AA H HH ++ A H H H H T H +
Sbjct: 75 HAADAHHAHHAADAHHAHHAAYAHHAHHAAYAHHAHHAAYAHHAHHATDAHHAADAHHAA 134
Query: 725 HSHESYD--HTPPADRRHGRAHAQHTHHI----ETDDGAATQDTRHRDE--RAQRDRQPR 880
+H + D H A H A+A H HH D D H + A
Sbjct: 135 DAHHAADAHHAADAHHAHHAAYAHHAHHAADAHHATDAHHAADAHHATDAHHAADAHHAA 194
Query: 881 TQTRSRDTRVMRHT--DHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNAR 1054
+ D H H H A AH A+ +A
Sbjct: 195 DAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAH 254
Query: 1055 RTRLSTPRHHSVHERDRRKLHH 1120
+ HH+ HH
Sbjct: 255 HAAYAHHAHHAADAHHAADAHH 276
Score = 45.4 bits (106), Expect = 0.002
Identities = 38/200 (19%), Positives = 54/200 (27%), Gaps = 10/200 (5%)
Frame = +2
Query: 551 HNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHTTGSPHS--TRHCTXRAHRRSTQTST 724
H A + A + HH H+ DA H + H + H+ H H +
Sbjct: 99 HAHHAAYAHHAHHAAYAHHAHHATDAHHAADAHHAADAHHAADAHHAADAHHAHHAAYAH 158
Query: 725 HSHESYDHTPPADRRHG--------RAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPR 880
H+H + D D H HA HH AA H A
Sbjct: 159 HAHHAADAHHATDAHHAADAHHATDAHHAADAHHAADAHHAADAHHAHHAADAHHAHHAA 218
Query: 881 TQTRSRDTRVMRHTDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRT 1060
+ H H+ H A+ H + A +A
Sbjct: 219 DAHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAHHAAYAHHAHHAADA----HHAADA 274
Query: 1061 RLSTPRHHSVHERDRRKLHH 1120
+T HH+ HH
Sbjct: 275 HHATDAHHAADAHHAADAHH 294
Score = 43.5 bits (101), Expect = 0.007
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Frame = +2
Query: 551 HNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHTTGSPHST-RHCTXRAHRRSTQTSTH 727
H A + A + HH H+ DA H + H T + H+ H AH + + H
Sbjct: 339 HASDAHHAADAHHAAYAHHAHHAADAHHAADAHHATDAHHAADAHHAADAHHAT--DAHH 396
Query: 728 SHESYDHTPPADRRHGRA-HAQHTHHIETDDGAATQDTRH 844
+H + AD H A HA HH AAT RH
Sbjct: 397 AHHA------ADAHHAAAHHATDAHHAAAHHEAATHCLRH 430
Score = 43.1 bits (100), Expect = 0.009
Identities = 40/210 (19%), Positives = 54/210 (25%), Gaps = 7/210 (3%)
Frame = +2
Query: 512 HXXXXXXXXXXXAHNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHT--TGSPHSTRHC 685
H H A + AA H HH + A H + H H H
Sbjct: 185 HHAADAHHAADAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHA 244
Query: 686 TXRAHRRSTQTST---HSHESYDHTPPADRRHGRA--HAQHTHHIETDDGAATQDTRHRD 850
+ H + H+H + D AD H HA HH AA H
Sbjct: 245 SDAHHAADAHHAAYAHHAHHAADAHHAADAHHATDAHHAADAHHAADAHHAADAHHAHHA 304
Query: 851 ERAQRDRQPRTQTRSRDTRVMRHTDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATK 1030
A + H H+ H A+ H + A
Sbjct: 305 ADAHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAHHAAYAHHAHHAADA 364
Query: 1031 TEPNTNARRTRLSTPRHHSVHERDRRKLHH 1120
+A +T HH+ HH
Sbjct: 365 ----HHAADAHHATDAHHAADAHHAADAHH 390
Score = 42.7 bits (99), Expect = 0.012
Identities = 43/199 (21%), Positives = 56/199 (27%), Gaps = 8/199 (4%)
Frame = +2
Query: 548 AHNRSAQVSPTAAPTRHPHHD-RHSDDAEHLRNTEHTTGSPHS-----TRHCTXRAHRRS 709
AH+ A H D H+ DA H + H + H+ H H
Sbjct: 157 AHHAHHAADAHHATDAHHAADAHHATDAHHAADAHHAADAHHAADAHHAHHAADAHHAHH 216
Query: 710 TQTSTHSHESYDHTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQT 889
+ H+H H A H A+A H HH AA H A
Sbjct: 217 AADAHHAH----HAADAHHAHHAAYAHHAHHASDAHHAA---DAHHAAYAHHAHHAADAH 269
Query: 890 RSRDTRVMRHTDHSTCKXXXXXXXXXXXXXXXXH--DAHVAHRNRRATKTEPNTNARRTR 1063
+ D H+ H DAH AH A +A
Sbjct: 270 HAADAHHATDAHHAADAHHAADAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAH 329
Query: 1064 LSTPRHHSVHERDRRKLHH 1120
+ HH+ H D HH
Sbjct: 330 HAAYAHHAHHASD---AHH 345
Score = 40.8 bits (94), Expect = 0.047
Identities = 31/129 (24%), Positives = 39/129 (30%), Gaps = 6/129 (4%)
Frame = +2
Query: 551 HNRSAQVSPTAAPTRH------PHHDRHSDDAEHLRNTEHTTGSPHSTRHCTXRAHRRST 712
H A + AA H HH H+ DA H + H + H H H
Sbjct: 312 HAADAHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAHHAAYA-HHAHHAADAHHAADA 370
Query: 713 QTSTHSHESYDHTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQTR 892
+T +H + D AD H A H HH D H D
Sbjct: 371 HHATDAHHAADAHHAADAHHA-TDAHHAHH--------AADAHHAAAHHATDAHHAAAHH 421
Query: 893 SRDTRVMRH 919
T +RH
Sbjct: 422 EAATHCLRH 430
Score = 33.9 bits (76), Expect = 5.7
Identities = 20/82 (24%), Positives = 29/82 (34%)
Frame = +2
Query: 503 SAPHXXXXXXXXXXXAHNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHTTGSPHSTRH 682
S H H A + AA H H+ DA H + H T + H+ H
Sbjct: 341 SDAHHAADAHHAAYAHHAHHAADAHHAADAHHATDAHHAADAHHAADAHHATDAHHA--H 398
Query: 683 CTXRAHRRSTQTSTHSHESYDH 748
AH + +T +H + H
Sbjct: 399 HAADAHHAAAHHATDAHHAAAH 420
>sp|P05227|HRP1_PLAFA HISTIDINE-RICH PROTEIN PRECURSOR (CLONE
PFHRP-II)|gi|160336|gb|AAA51639.1| histidine-rich protein
[Plasmodium falciparum]
Length = 332
Score = 52.4 bits (124), Expect = 2e-05
Identities = 43/201 (21%), Positives = 55/201 (26%), Gaps = 10/201 (4%)
Frame = +2
Query: 548 AHNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNT-----EHTTGSPHSTRHCTXRAHRRST 712
AH A + A H HH H+ DA H + H H H H
Sbjct: 52 AHVDDAHHAHHVADAHHAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHA 111
Query: 713 QTSTHSHESYD-----HTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQP 877
+ H+H + D H A H A A H HH AA H A
Sbjct: 112 ADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHH------AADAHHAHHAAYAHHAHHA 165
Query: 878 RTQTRSRDTRVMRHTDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARR 1057
+ D + H+ H AH A A T+A
Sbjct: 166 SDAHHAADAHHAAYAHHAH-HAADAHHAADAHHAAYAHHAHHAADAHHAADAHHATDAHH 224
Query: 1058 TRLSTPRHHSVHERDRRKLHH 1120
+ HH+ HH
Sbjct: 225 AHHAADAHHATDAHHAADAHH 245
Score = 48.5 bits (114), Expect = 2e-04
Identities = 47/225 (20%), Positives = 59/225 (25%), Gaps = 8/225 (3%)
Frame = +2
Query: 578 TAAPTRHPHHDRHSDDAEHLRNTEHTTGSPHSTRHCTXRAHRRSTQTSTHSHESYD---- 745
T A HH H DA H + H + H H H + H+H + D
Sbjct: 50 TQAHVDDAHHAHHVADAHHAHHAHHAADA-HHAHHAADAHHAHHAADAHHAHHAADAHHA 108
Query: 746 -HTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQTRSRDTRVMRHT 922
H A H A A H HH AA H A + H
Sbjct: 109 HHAADAHHAHHAADAHHAHH------AADAHHAHHAADAHHAHHAADAHHAHHAAYAHHA 162
Query: 923 DHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRLSTPRHHSV---H 1093
H++ H AH A A A + HH+ H
Sbjct: 163 HHAS----DAHHAADAHHAAYAHHAHHAADAHHAADAHHAAYAHHAHHAADAHHAADAHH 218
Query: 1094 ERDRRKLHHQ*RXTRTSTDTLPTRQRESDAATHATPPAEYGQRPH 1228
D HH +TD A H A + H
Sbjct: 219 ATDAHHAHHA-ADAHHATDAHHAADAHHAADAHHATDAHHAADAH 262
Score = 41.6 bits (96), Expect = 0.027
Identities = 28/110 (25%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Frame = +2
Query: 551 HNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHTTGSPHS-----TRHCTXRAHRRSTQ 715
H A + A + HH H+ DA H + H T + H+ H T H
Sbjct: 185 HAADAHHAADAHHAAYAHHAHHAADAHHAADAHHATDAHHAHHAADAHHATDAHHAADAH 244
Query: 716 TSTHSHESYDHTPPADRRHG--RAHAQHTHHIETDDGAATQDTRHRDERA 859
+ +H + D AD H HA HH D D+ H A
Sbjct: 245 HAADAHHATDAHHAADAHHATDAHHAADAHH--AADAHHATDSHHAHHAA 292
Score = 40.4 bits (93), Expect = 0.061
Identities = 38/198 (19%), Positives = 54/198 (27%), Gaps = 8/198 (4%)
Frame = +2
Query: 551 HNRSAQVSPTAAPTRH------PHHDRHSDDAEHLRNTEHTTGSPHSTRHCTXRAHRRST 712
H A + AA H HH H+ DA H + H + H H H
Sbjct: 137 HAADAHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAHHAAYA-HHAHHAADAHHAADA 195
Query: 713 QTSTHSHESYDHTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQTR 892
+ ++H ++ H A HA HH A H A T
Sbjct: 196 HHAAYAHHAH-HAADAHHAADAHHATDAHHAHHAADAHHATDAHHAADAHHAADAHHATD 254
Query: 893 SRDTRVMRHTDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRLST 1072
+ H + H H A + A + + +T
Sbjct: 255 AHHAADAHHATDAHHAADAHHAADAHHATDSHHAHHAADAHHAAAHHATDAHHAAAHHAT 314
Query: 1073 PRHHSV--HERDRRKLHH 1120
HH+ HE L H
Sbjct: 315 DAHHAAAHHEAATHCLRH 332
Score = 34.3 bits (77), Expect = 4.4
Identities = 28/130 (21%), Positives = 32/130 (24%)
Frame = +2
Query: 731 HESYDHTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQTRSRDTRV 910
HE+ H A H A A H HH D H A
Sbjct: 48 HETQAHVDDAHHAHHVADAHHAHHAHH-----AADAHHAHHAADA--------------- 87
Query: 911 MRHTDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRLSTPRHHSV 1090
H H DAH AH A +A + HH+
Sbjct: 88 --HHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAH 145
Query: 1091 HERDRRKLHH 1120
H D HH
Sbjct: 146 HAADAHHAHH 155
>pir||A25942 histidine/alanine-rich protein II - malaria parasite (Plasmodium
falciparum) (fragments)
Length = 309
Score = 52.4 bits (124), Expect = 2e-05
Identities = 43/201 (21%), Positives = 55/201 (26%), Gaps = 10/201 (4%)
Frame = +2
Query: 548 AHNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNT-----EHTTGSPHSTRHCTXRAHRRST 712
AH A + A H HH H+ DA H + H H H H
Sbjct: 29 AHVDDAHHAHHVADAHHAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHA 88
Query: 713 QTSTHSHESYD-----HTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQP 877
+ H+H + D H A H A A H HH AA H A
Sbjct: 89 ADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHH------AADAHHAHHAAYAHHAHHA 142
Query: 878 RTQTRSRDTRVMRHTDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARR 1057
+ D + H+ H AH A A T+A
Sbjct: 143 SDAHHAADAHHAAYAHHAH-HAADAHHAADAHHAAYAHHAHHAADAHHAADAHHATDAHH 201
Query: 1058 TRLSTPRHHSVHERDRRKLHH 1120
+ HH+ HH
Sbjct: 202 AHHAADAHHATDAHHAADAHH 222
Score = 48.5 bits (114), Expect = 2e-04
Identities = 47/225 (20%), Positives = 59/225 (25%), Gaps = 8/225 (3%)
Frame = +2
Query: 578 TAAPTRHPHHDRHSDDAEHLRNTEHTTGSPHSTRHCTXRAHRRSTQTSTHSHESYD---- 745
T A HH H DA H + H + H H H + H+H + D
Sbjct: 27 TQAHVDDAHHAHHVADAHHAHHAHHAADA-HHAHHAADAHHAHHAADAHHAHHAADAHHA 85
Query: 746 -HTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQTRSRDTRVMRHT 922
H A H A A H HH AA H A + H
Sbjct: 86 HHAADAHHAHHAADAHHAHH------AADAHHAHHAADAHHAHHAADAHHAHHAAYAHHA 139
Query: 923 DHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRLSTPRHHSV---H 1093
H++ H AH A A A + HH+ H
Sbjct: 140 HHAS----DAHHAADAHHAAYAHHAHHAADAHHAADAHHAAYAHHAHHAADAHHAADAHH 195
Query: 1094 ERDRRKLHHQ*RXTRTSTDTLPTRQRESDAATHATPPAEYGQRPH 1228
D HH +TD A H A + H
Sbjct: 196 ATDAHHAHHA-ADAHHATDAHHAADAHHAADAHHATDAHHAADAH 239
Score = 41.6 bits (96), Expect = 0.027
Identities = 28/110 (25%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Frame = +2
Query: 551 HNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHTTGSPHS-----TRHCTXRAHRRSTQ 715
H A + A + HH H+ DA H + H T + H+ H T H
Sbjct: 162 HAADAHHAADAHHAAYAHHAHHAADAHHAADAHHATDAHHAHHAADAHHATDAHHAADAH 221
Query: 716 TSTHSHESYDHTPPADRRHG--RAHAQHTHHIETDDGAATQDTRHRDERA 859
+ +H + D AD H HA HH D D+ H A
Sbjct: 222 HAADAHHATDAHHAADAHHATDAHHAADAHH--AADAHHATDSHHAHHAA 269
Score = 40.4 bits (93), Expect = 0.061
Identities = 38/198 (19%), Positives = 54/198 (27%), Gaps = 8/198 (4%)
Frame = +2
Query: 551 HNRSAQVSPTAAPTRH------PHHDRHSDDAEHLRNTEHTTGSPHSTRHCTXRAHRRST 712
H A + AA H HH H+ DA H + H + H H H
Sbjct: 114 HAADAHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAHHAAYA-HHAHHAADAHHAADA 172
Query: 713 QTSTHSHESYDHTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQTR 892
+ ++H ++ H A HA HH A H A T
Sbjct: 173 HHAAYAHHAH-HAADAHHAADAHHATDAHHAHHAADAHHATDAHHAADAHHAADAHHATD 231
Query: 893 SRDTRVMRHTDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRLST 1072
+ H + H H A + A + + +T
Sbjct: 232 AHHAADAHHATDAHHAADAHHAADAHHATDSHHAHHAADAHHAAAHHATDAHHAAAHHAT 291
Query: 1073 PRHHSV--HERDRRKLHH 1120
HH+ HE L H
Sbjct: 292 DAHHAAAHHEAATHCLRH 309
Score = 34.3 bits (77), Expect = 4.4
Identities = 28/130 (21%), Positives = 32/130 (24%)
Frame = +2
Query: 731 HESYDHTPPADRRHGRAHAQHTHHIETDDGAATQDTRHRDERAQRDRQPRTQTRSRDTRV 910
HE+ H A H A A H HH D H A
Sbjct: 25 HETQAHVDDAHHAHHVADAHHAHHAHH-----AADAHHAHHAADA--------------- 64
Query: 911 MRHTDHSTCKXXXXXXXXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRLSTPRHHSV 1090
H H DAH AH A +A + HH+
Sbjct: 65 --HHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAH 122
Query: 1091 HERDRRKLHH 1120
H D HH
Sbjct: 123 HAADAHHAHH 132
>ref|XP_221192.1| similar to gamete-specific homeodomain protein GSP1 [Chlamydomonas
reinhardtii] [Rattus norvegicus]
Length = 373
Score = 51.2 bits (121), Expect = 3e-05
Identities = 59/260 (22%), Positives = 78/260 (29%), Gaps = 22/260 (8%)
Frame = +2
Query: 485 TRPR--PPSAPHXXXXXXXXXXXAHNRSAQVSPTAAPTRHPHHDRHSDDAEHLRNTEHTT 658
T PR P APH +H S SP P PH + H + +T +T
Sbjct: 61 TSPRVTPAGAPHRESHQQEHLTESHT-SRSTSPRVTPAGAPHRESHQQEHITESHTSRST 119
Query: 659 GSPHSTRHCTXRAHRRSTQTS--THSHESYDHTP---PADRRHGRAHAQHTHHIETDDGA 823
+ HR S Q T SH S +P PA H +H Q H E+
Sbjct: 120 SPRVTPAGAAGAPHRESHQQEHLTESHTSRSTSPRVTPAGAPHRESH-QQEHITESHTSR 178
Query: 824 ATQ------DTRHRDERAQ---------RDRQPRTQTRSRDTRVMRHTDHSTCKXXXXXX 958
+T HR+ Q R PR R +H T
Sbjct: 179 STSPRVTPAGAPHRESHQQEHLTESHTSRSTSPRVTPAGAHHRESHQQEHLTESHTSRST 238
Query: 959 XXXXXXXXXXHDAHVAHRNRRATKTEPNTNARRTRLSTPRHHSVHERDRRKLHHQ*RXTR 1138
H + + T +T+ R T P H H+++ H R T
Sbjct: 239 SPRVTPAGAHHRESHQQEHITESHTSRSTSPRVTPAGAP-HRESHQQEHLTESHTSRSTS 297
Query: 1139 TSTDTLPTRQRESDAATHAT 1198
RES H T
Sbjct: 298 PRVTPAGAHHRESHQQEHLT 317
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 126
effective length of database: 260,468,745
effective search space used: 81266248440
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)