BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BE037596.f
         (892 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188662.2|  bactericidal permeability-increasing prote...   389   e-118
dbj|BAB02808.1|  contains similarity to bactericidal permeab...   392   e-108
ref|NP_177195.1|  hypothetical protein; protein id: At1g7038...    38   0.22 
ref|NP_671951.1|  similar to F-box protein family, AtFBX8; p...    37   0.50 
ref|NP_198966.1|  putative protein; protein id: At5g41510.1 ...    37   0.50 

>ref|NP_188662.2| bactericidal permeability-increasing protein precursor, putative;
           protein id: At3g20270.1 [Arabidopsis thaliana]
          Length = 722

 Score =  389 bits (999), Expect(2) = e-118
 Identities = 194/197 (98%), Positives = 194/197 (98%)
 Frame = +3

Query: 108 MNRSKEENVAPTMKDDSPFGKLTEDLLIEIFIRIPITNWEQVSCVRKQWANLFRGECLWL 287
           MNRSKEENVAPTMKDDSPFGKLTEDLLIEIFIRIPITNWEQVSCVRKQWANLFRGECLWL
Sbjct: 1   MNRSKEENVAPTMKDDSPFGKLTEDLLIEIFIRIPITNWEQVSCVRKQWANLFRGECLWL 60

Query: 288 AALNRAYPLASKTKSWIGPIRQGLSKRCRRYVALYISRNILGVDDTDIDEMLGHIYVFLN 467
           AALNRAYPLASKTKSWIGPIRQGLSKR  RYVALYISRNILGVDDTDIDEMLGHIYVFLN
Sbjct: 61  AALNRAYPLASKTKSWIGPIRQGLSKR--RYVALYISRNILGVDDTDIDEMLGHIYVFLN 118

Query: 468 DQLQLSTMPASGILHGTLIDQLIVCGQSKEEAGELATKIWLALLDNLEDT*HTFTVLKSI 647
           DQLQLSTMPASGILHGTLIDQLIVCGQSKEEAGELATKIWLALLDNLEDT HTFTVLKSI
Sbjct: 119 DQLQLSTMPASGILHGTLIDQLIVCGQSKEEAGELATKIWLALLDNLEDTKHTFTVLKSI 178

Query: 648 AQEYDGFLPYPYSRPIK 698
           AQEYDGFLPYPYSRPIK
Sbjct: 179 AQEYDGFLPYPYSRPIK 195




 Score = 58.5 bits (140), Expect(2) = e-118
 Identities = 28/41 (68%), Positives = 32/41 (77%), Gaps = 2/41 (4%)
 Frame = +2

Query: 695 QVHWKVFQKPVVDFRDLLDHSEDCDLXGIAKNSFK--PFLS 811
           +V WKVF+K  VDFRDLLDHSE CDL GIAKN F+  P+ S
Sbjct: 195 KVQWKVFEKLFVDFRDLLDHSEYCDLIGIAKNKFQTIPYFS 235



>dbj|BAB02808.1| contains similarity to bactericidal permeability-increasing
           protein~gene_id:MQC12.2 [Arabidopsis thaliana]
          Length = 1424

 Score =  392 bits (1007), Expect = e-108
 Identities = 196/199 (98%), Positives = 196/199 (98%)
 Frame = +3

Query: 102 IVMNRSKEENVAPTMKDDSPFGKLTEDLLIEIFIRIPITNWEQVSCVRKQWANLFRGECL 281
           IVMNRSKEENVAPTMKDDSPFGKLTEDLLIEIFIRIPITNWEQVSCVRKQWANLFRGECL
Sbjct: 5   IVMNRSKEENVAPTMKDDSPFGKLTEDLLIEIFIRIPITNWEQVSCVRKQWANLFRGECL 64

Query: 282 WLAALNRAYPLASKTKSWIGPIRQGLSKRCRRYVALYISRNILGVDDTDIDEMLGHIYVF 461
           WLAALNRAYPLASKTKSWIGPIRQGLSKR  RYVALYISRNILGVDDTDIDEMLGHIYVF
Sbjct: 65  WLAALNRAYPLASKTKSWIGPIRQGLSKR--RYVALYISRNILGVDDTDIDEMLGHIYVF 122

Query: 462 LNDQLQLSTMPASGILHGTLIDQLIVCGQSKEEAGELATKIWLALLDNLEDT*HTFTVLK 641
           LNDQLQLSTMPASGILHGTLIDQLIVCGQSKEEAGELATKIWLALLDNLEDT HTFTVLK
Sbjct: 123 LNDQLQLSTMPASGILHGTLIDQLIVCGQSKEEAGELATKIWLALLDNLEDTKHTFTVLK 182

Query: 642 SIAQEYDGFLPYPYSRPIK 698
           SIAQEYDGFLPYPYSRPIK
Sbjct: 183 SIAQEYDGFLPYPYSRPIK 201



>ref|NP_177195.1| hypothetical protein; protein id: At1g70380.1 [Arabidopsis
           thaliana]|gi|7485686|pir||T01484 hypothetical protein
           F17O7.8 - Arabidopsis thaliana|gi|3176679|gb|AAC18802.1|
           F17O7.8 [Arabidopsis thaliana]
          Length = 377

 Score = 37.7 bits (86), Expect = 0.22
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = +3

Query: 153 DSPFGKLTEDLLIEIFIRIPITNWEQVSCVRKQWANLFRGECLWLAALNRA 305
           ++ F  L  D+ IEI  R+P+    +  CV K+WA+L RGE    A L R+
Sbjct: 3   NTSFETLALDMQIEILARLPLKYLMRCMCVSKKWASLIRGEDFRSAYLLRS 53



>ref|NP_671951.1| similar to F-box protein family, AtFBX8; protein id: At2g40925.1
           [Arabidopsis thaliana]
          Length = 403

 Score = 36.6 bits (83), Expect = 0.50
 Identities = 15/35 (42%), Positives = 23/35 (64%)
 Frame = +3

Query: 168 KLTEDLLIEIFIRIPITNWEQVSCVRKQWANLFRG 272
           ++  DL+IEI IR+P  ++ +  CV KQW+ L  G
Sbjct: 26  EIPPDLMIEILIRLPTKSFMRFKCVSKQWSPLISG 60



>ref|NP_198966.1| putative protein; protein id: At5g41510.1 [Arabidopsis
           thaliana]|gi|10178005|dbj|BAB11457.1|
           gb|AAC67359.1~gene_id:MBK23.3~strong similarity to
           unknown protein [Arabidopsis thaliana]
          Length = 400

 Score = 36.6 bits (83), Expect = 0.50
 Identities = 19/52 (36%), Positives = 26/52 (49%)
 Frame = +3

Query: 171 LTEDLLIEIFIRIPITNWEQVSCVRKQWANLFRGECLWLAALNRAYPLASKT 326
           L  DL+ EIF R+P+T+ + V    K W NL + E      + RA     KT
Sbjct: 8   LPRDLIEEIFSRVPLTSMKAVRLTCKSWNNLSKSESFTKVHIGRAATREEKT 59



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 122
effective length of database: 265,824,929
effective search space used: 46253537646
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)