BLAST Search Results

BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV563541.r
         (631 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173104.1|  unknown protein; protein id: At1g16560.1 [...   441   e-123
gb|AAM12953.1|  unknown protein [Arabidopsis thaliana]|gi|21...   327   6e-89
ref|NP_568951.1|  putative protein; protein id: At5g62130.1,...   271   6e-72
gb|AAO00714.1|  unknown protein [Oryza sativa (japonica cult...   231   4e-60
dbj|BAB10175.1|  gene_id:MTG10.16~unknown protein [Arabidops...   209   2e-53

>ref|NP_173104.1| unknown protein; protein id: At1g16560.1 [Arabidopsis
           thaliana]|gi|25372701|pir||H86300 F19K19.12 protein -
           Arabidopsis
           thaliana|gi|9989062|gb|AAG10825.1|AC011808_13 Unknown
           protein [Arabidopsis thaliana]
          Length = 342

 Score =  441 bits (1133), Expect = e-123
 Identities = 202/203 (99%), Positives = 202/203 (99%)
 Frame = +3

Query: 21  MAVHYWTVLFLLLPCLFCISNASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDGGP 200
           MAVHYWT LFLLLPCLFCISNASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDGGP
Sbjct: 1   MAVHYWTALFLLLPCLFCISNASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDGGP 60

Query: 201 WYIQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASV 380
           WYIQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASV
Sbjct: 61  WYIQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASV 120

Query: 381 AFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHS 560
           AFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHS
Sbjct: 121 AFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHS 180

Query: 561 RDVDLTERLDYSSAVAILGFSLI 629
           RDVDLTERLDYSSAVAILGFSLI
Sbjct: 181 RDVDLTERLDYSSAVAILGFSLI 203



>gb|AAM12953.1| unknown protein [Arabidopsis thaliana]|gi|21386931|gb|AAM47869.1|
           unknown protein [Arabidopsis thaliana]
          Length = 156

 Score =  327 bits (837), Expect(2) = 6e-89
 Identities = 145/147 (98%), Positives = 147/147 (99%)
 Frame = +3

Query: 123 VSECEISGCVGQLCFPQCNSSSDGGPWYIQEPLYLQWKKWGCQGDCRYQCMVNRETERET 302
           ++ECEISGCVGQLCFPQCNSSSDGGPWYIQEPLYLQWKKWGCQGDCRYQCMVNRETERET
Sbjct: 10  ITECEISGCVGQLCFPQCNSSSDGGPWYIQEPLYLQWKKWGCQGDCRYQCMVNRETERET 69

Query: 303 LGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAY 482
           LGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAY
Sbjct: 70  LGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAY 129

Query: 483 YEYVGLWHIYGLLSMNSWFWSAVFHSR 563
           YEYVGLWHIYGLLSMNSWFWSAVFHSR
Sbjct: 130 YEYVGLWHIYGLLSMNSWFWSAVFHSR 156




 Score = 23.1 bits (48), Expect(2) = 6e-89
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 82  MLVLAMLIQIT 114
           MLVLAMLIQIT
Sbjct: 1   MLVLAMLIQIT 11



>ref|NP_568951.1| putative protein; protein id: At5g62130.1, supported by cDNA:
           gi_15294203, supported by cDNA: gi_20147282 [Arabidopsis
           thaliana]|gi|15294204|gb|AAK95279.1|AF410293_1
           AT5g62130/mtg10_150 [Arabidopsis
           thaliana]|gi|20147283|gb|AAM10355.1| AT5g62130/mtg10_150
           [Arabidopsis thaliana]
          Length = 343

 Score =  271 bits (692), Expect = 6e-72
 Identities = 118/202 (58%), Positives = 151/202 (74%), Gaps = 4/202 (1%)
 Frame = +3

Query: 36  WTVLFLLLPCLFCISNASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDG----GPW 203
           W +L +++ CL     AS GD+D  Y++CV +C+ +GCVG  CF  C  S+DG    GPW
Sbjct: 7   WVLLIIVVSCLVSTLEASEGDSDSLYKSCVDQCQKTGCVGDTCFQHCKFSADGKAIDGPW 66

Query: 204 YIQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVA 383
           Y+QEPLYL+WK+W CQ DC+Y+CM+ RE ER+  G+ P KY GKWP K V GIQEP SVA
Sbjct: 67  YMQEPLYLRWKQWDCQSDCQYECMMTREEERKRNGERPTKYFGKWPLKHVYGIQEPVSVA 126

Query: 384 FSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSR 563
           FS L+LAM F GW+S+FI++YYKLPL+ +R  YYEY G+ HIY ++ MNS FWS++ HSR
Sbjct: 127 FSALDLAMQFQGWVSYFILVYYKLPLQPNRKTYYEYNGIVHIYAIIVMNSLFWSSICHSR 186

Query: 564 DVDLTERLDYSSAVAILGFSLI 629
           DV+LTERLDYSSA  + GFSLI
Sbjct: 187 DVELTERLDYSSATVLAGFSLI 208



>gb|AAO00714.1| unknown protein [Oryza sativa (japonica cultivar-group)]
          Length = 347

 Score =  231 bits (590), Expect = 4e-60
 Identities = 108/205 (52%), Positives = 136/205 (65%), Gaps = 7/205 (3%)
 Frame = +3

Query: 36  WTVLFLLLPCLFCISN--ASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDGGP--- 200
           W  L + L     ++   AS GDADP YR CV ECE +G + +     C   +D  P   
Sbjct: 8   WVALLVGLAAAAVVATLGASEGDADPLYRACVDECEKTGSLRETSVRHCQVPTDDHPADK 67

Query: 201 -WYIQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPAS 377
            WY  EPLYLQWK+W C+ +CRY CM+ RE+ERE LG   VKYHGKWP KR    QEP S
Sbjct: 68  SWYAHEPLYLQWKEWNCKSECRYHCMMERESEREQLGLGSVKYHGKWPMKRASVFQEPIS 127

Query: 378 VAFSVLNLAMHFHGWLSFFIMIYYKLPLK-QDRTAYYEYVGLWHIYGLLSMNSWFWSAVF 554
            A S L+L + F+GWLSFF+++ YKLPL+ + +  YYEY GLWHIYGLL+MN+WFW A++
Sbjct: 128 AALSALSLLVQFNGWLSFFLLLSYKLPLRPETQMTYYEYTGLWHIYGLLAMNAWFWRAIY 187

Query: 555 HSRDVDLTERLDYSSAVAILGFSLI 629
           HS D   TE+L YSS  A +G+SLI
Sbjct: 188 HSCDTVWTEKLYYSSFAAFIGYSLI 212



>dbj|BAB10175.1| gene_id:MTG10.16~unknown protein [Arabidopsis thaliana]
          Length = 276

 Score =  209 bits (532), Expect = 2e-53
 Identities = 91/141 (64%), Positives = 113/141 (79%)
 Frame = +3

Query: 207 IQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAF 386
           +QEPLYL+WK+W CQ DC+Y+CM+ RE ER+  G+ P KY GKWP K V GIQEP SVAF
Sbjct: 1   MQEPLYLRWKQWDCQSDCQYECMMTREEERKRNGERPTKYFGKWPLKHVYGIQEPVSVAF 60

Query: 387 SVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRD 566
           S L+LAM F GW+S+FI++YYKLPL+ +R  YYEY G+ HIY ++ MNS FWS++ HSRD
Sbjct: 61  SALDLAMQFQGWVSYFILVYYKLPLQPNRKTYYEYNGIVHIYAIIVMNSLFWSSICHSRD 120

Query: 567 VDLTERLDYSSAVAILGFSLI 629
           V+LTERLDYSSA  + GFSLI
Sbjct: 121 VELTERLDYSSATVLAGFSLI 141



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 118
effective length of database: 271,181,113
effective search space used: 24677481283
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)







BLAST Search Results