BLAST Search Results

BLASTX 1.4.13-Paracel [2002-12-12] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= AV519605.r (606 letters) Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 1,339,046 sequences; 429,188,541 total letters Searching...................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB92960.1|  putative serine threonine kinase [Arabidops...   422   e-117
gb|AAK59558.1|  putative receptor-protein kinase [Arabidopsi...   422   e-117
ref|NP_190723.1|  receptor-protein kinase-like protein; prot...   422   e-117
gb|AAL40864.1|  receptor protein kinase-like protein [Capsic...   400   e-111
dbj|BAB56062.1|  putative receptor-protein kinase [Oryza sat...   384   e-106

>emb|CAB92960.1| putative serine threonine kinase [Arabidopsis thaliana]
          Length = 322

 Score =  422 bits (1084), Expect = e-117
 Identities = 202/202 (100%), Positives = 202/202 (100%)
 Frame = +1

Query: 1   PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP 180
           PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP
Sbjct: 85  PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP 144

Query: 181 SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT 360
           SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT
Sbjct: 145 SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT 204

Query: 361 LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS 540
           LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS
Sbjct: 205 LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS 264

Query: 541 LAEWAPYCYKKGMLDQIVDPYL 606
           LAEWAPYCYKKGMLDQIVDPYL
Sbjct: 265 LAEWAPYCYKKGMLDQIVDPYL 286

>gb|AAK59558.1| putative receptor-protein kinase [Arabidopsis thaliana]
          Length = 895

 Score =  422 bits (1084), Expect = e-117
 Identities = 202/202 (100%), Positives = 202/202 (100%)
 Frame = +1

Query: 1    PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP 180
            PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP
Sbjct: 569  PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP 628

Query: 181  SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT 360
            SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT
Sbjct: 629  SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT 688

Query: 361  LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS 540
            LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS
Sbjct: 689  LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS 748

Query: 541  LAEWAPYCYKKGMLDQIVDPYL 606
            LAEWAPYCYKKGMLDQIVDPYL
Sbjct: 749  LAEWAPYCYKKGMLDQIVDPYL 770

>ref|NP_190723.1| receptor-protein kinase-like protein; protein id: At3g51550.1,
            supported by cDNA: gi_14334759 [Arabidopsis
            thaliana]|gi|11346402|pir||T45786 receptor-protein
            kinase-like protein - Arabidopsis
            thaliana|gi|6572076|emb|CAB63019.1| receptor-protein
            kinase-like protein [Arabidopsis thaliana]
          Length = 895

 Score =  422 bits (1084), Expect = e-117
 Identities = 202/202 (100%), Positives = 202/202 (100%)
 Frame = +1

Query: 1    PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP 180
            PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP
Sbjct: 569  PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP 628

Query: 181  SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT 360
            SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT
Sbjct: 629  SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT 688

Query: 361  LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS 540
            LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS
Sbjct: 689  LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS 748

Query: 541  LAEWAPYCYKKGMLDQIVDPYL 606
            LAEWAPYCYKKGMLDQIVDPYL
Sbjct: 749  LAEWAPYCYKKGMLDQIVDPYL 770

>gb|AAL40864.1| receptor protein kinase-like protein [Capsicum annuum]
          Length = 648

 Score =  400 bits (1027), Expect = e-111
 Identities = 190/202 (94%), Positives = 195/202 (96%)
 Frame = +1

Query: 1   PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP 180
           P+SEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGT+REHLYKTQ P
Sbjct: 324 PLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTQKP 383

Query: 181 SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT 360
            LPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT
Sbjct: 384 PLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT 443

Query: 361 LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS 540
           LDHTHVSTVVKGSFGYLDPEYFRRQQLT+KSDVYSFGVVLFE LCARPALNPTL KEQVS
Sbjct: 444 LDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLPKEQVS 503

Query: 541 LAEWAPYCYKKGMLDQIVDPYL 606
           LAEWA +CYKKG  DQI+DPYL
Sbjct: 504 LAEWAFHCYKKGTFDQIIDPYL 525

>dbj|BAB56062.1| putative receptor-protein kinase [Oryza sativa (japonica
            cultivar-group)]|gi|21743317|dbj|BAC03312.1| putative
            receptor-protein kinase [Oryza sativa (japonica
            cultivar-group)]
          Length = 896

 Score =  384 bits (987), Expect = e-106
 Identities = 184/202 (91%), Positives = 194/202 (95%)
 Frame = +1

Query: 1    PMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNP 180
            P+SEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEE  EMILVYDYMAHGT+REHLYKT+N 
Sbjct: 576  PLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEEKNEMILVYDYMAHGTLREHLYKTKNA 635

Query: 181  SLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT 360
             L W+QRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGP+
Sbjct: 636  PLTWRQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPS 695

Query: 361  LDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVS 540
            +DHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFE LCARPALNPTLAKE+VS
Sbjct: 696  MDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPTLAKEEVS 755

Query: 541  LAEWAPYCYKKGMLDQIVDPYL 606
            LAEWA +C KKG+LDQIVDP+L
Sbjct: 756  LAEWALHCQKKGILDQIVDPHL 777

  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 117
effective length of database: 272,520,159
effective search space used: 22891693356
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

BLAST Search Results