BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Z48413.x
(279 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_728519.1| CG7004-PC [Drosophila melanogaster]|gi|230... 30 8.2
ref|NP_524822.1| CG7004-PA [Drosophila melanogaster]|gi|246... 30 8.2
gb|AAK27793.1|AF242375_1 phosphatidylinositol 4-kinase beta... 30 8.2
>ref|NP_728519.1| CG7004-PC [Drosophila melanogaster]|gi|23092695|gb|AAN11438.1|
CG7004-PC [Drosophila melanogaster]
Length = 1338
Score = 30.0 bits (66), Expect = 8.2
Identities = 14/49 (28%), Positives = 33/49 (66%), Gaps = 2/49 (4%)
Frame = -1
Query: 279 KDEMMFFVKPFEVECVSDTSGF*GKEVLNTICLYEIFHLCNN--RKYFV 139
++++ +V+P+++ C+S+ SG + +LNT+ L++I N ++YF+
Sbjct: 1108 EEQVDLWVRPYKIVCLSNDSGL-IEPILNTVSLHQIKKNSNKSLKEYFI 1155
>ref|NP_524822.1| CG7004-PA [Drosophila melanogaster]|gi|24654708|ref|NP_728518.1|
CG7004-PB [Drosophila
melanogaster]|gi|15292409|gb|AAK93473.1| LP07057p
[Drosophila melanogaster]|gi|23092693|gb|AAF47375.2|
CG7004-PA [Drosophila
melanogaster]|gi|23092694|gb|AAN11437.1| CG7004-PB
[Drosophila melanogaster]
Length = 1674
Score = 30.0 bits (66), Expect = 8.2
Identities = 14/49 (28%), Positives = 33/49 (66%), Gaps = 2/49 (4%)
Frame = -1
Query: 279 KDEMMFFVKPFEVECVSDTSGF*GKEVLNTICLYEIFHLCNN--RKYFV 139
++++ +V+P+++ C+S+ SG + +LNT+ L++I N ++YF+
Sbjct: 1444 EEQVDLWVRPYKIVCLSNDSGL-IEPILNTVSLHQIKKNSNKSLKEYFI 1491
>gb|AAK27793.1|AF242375_1 phosphatidylinositol 4-kinase beta isoform [Drosophila melanogaster]
Length = 1338
Score = 30.0 bits (66), Expect = 8.2
Identities = 14/49 (28%), Positives = 33/49 (66%), Gaps = 2/49 (4%)
Frame = -1
Query: 279 KDEMMFFVKPFEVECVSDTSGF*GKEVLNTICLYEIFHLCNN--RKYFV 139
++++ +V+P+++ C+S+ SG + +LNT+ L++I N ++YF+
Sbjct: 1108 EEQVDLWVRPYKIVCLSNDSGL-IEPILNTVSLHQIKKNSNKSLKEYFI 1155
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 68
effective length of database: 338,133,413
effective search space used: 8115201912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)