BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Z48387.x
         (267 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM19840.1|  AT5g60600/mup24_10 [Arabidopsis thaliana]          39   0.023
gb|AAO15446.1|AF434673_1  GcpE [Arabidopsis thaliana]              39   0.023
ref|NP_200868.1|  putative protein; protein id: At5g60600.1,...    39   0.023
dbj|BAB09833.1|  GcpE protein [Arabidopsis thaliana]               39   0.023
gb|AAL91150.1|  GcpE protein [Arabidopsis thaliana]                39   0.023

>gb|AAM19840.1| AT5g60600/mup24_10 [Arabidopsis thaliana]
          Length = 741

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -2

Query: 245 GLIKEHVRWVDPPVADE 195
           GLIKEH RWVDPPVADE
Sbjct: 725 GLIKEHGRWVDPPVADE 741



>gb|AAO15446.1|AF434673_1 GcpE [Arabidopsis thaliana]
          Length = 740

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -2

Query: 245 GLIKEHVRWVDPPVADE 195
           GLIKEH RWVDPPVADE
Sbjct: 724 GLIKEHGRWVDPPVADE 740



>ref|NP_200868.1| putative protein; protein id: At5g60600.1, supported by cDNA:
           gi_19698828, supported by cDNA: gi_20453200 [Arabidopsis
           thaliana]
          Length = 741

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -2

Query: 245 GLIKEHVRWVDPPVADE 195
           GLIKEH RWVDPPVADE
Sbjct: 725 GLIKEHGRWVDPPVADE 741



>dbj|BAB09833.1| GcpE protein [Arabidopsis thaliana]
          Length = 716

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -2

Query: 245 GLIKEHVRWVDPPVADE 195
           GLIKEH RWVDPPVADE
Sbjct: 700 GLIKEHGRWVDPPVADE 716



>gb|AAL91150.1| GcpE protein [Arabidopsis thaliana]
          Length = 741

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -2

Query: 245 GLIKEHVRWVDPPVADE 195
           GLIKEH RWVDPPVADE
Sbjct: 725 GLIKEHGRWVDPPVADE 741



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 64
effective length of database: 343,489,597
effective search space used: 8243750328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)