BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Z48377.r
         (325 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T04492  protein kinase homolog F8F16.70 - Arabidopsis t...   163   6e-40
ref|NP_567870.1|  leucine-rich repeat transmembrane protein ...   146   7e-35
pir||T07865  receptor-like protein kinase PRK1 - tomato|gi|3...   100   8e-21
pir||T07862  receptor-like protein kinase PRK2 - tomato|gi|3...    97   5e-20
dbj|BAB01878.1|  receptor protein kinase [Arabidopsis thaliana]    94   6e-19

>pir||T04492 protein kinase homolog F8F16.70 - Arabidopsis
           thaliana|gi|2827520|emb|CAA16528.1| receptor kinase-like
           protein [Arabidopsis
           thaliana]|gi|7270027|emb|CAB79843.1| receptor
           kinase-like protein [Arabidopsis thaliana]
          Length = 951

 Score =  163 bits (412), Expect = 6e-40
 Identities = 85/107 (79%), Positives = 86/107 (79%)
 Frame = +3

Query: 3   SNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHGNIMELS 182
           SNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHGNIMELS
Sbjct: 400 SNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHGNIMELS 459

Query: 183 KCLFIFIQ*NEESDEFCWIDFAANRTPGQVVLDWPIRLKIVRGVTRG 323
           K                     +NRTPGQVVLDWPIRLKIVRGVTRG
Sbjct: 460 K---------------------SNRTPGQVVLDWPIRLKIVRGVTRG 485



>ref|NP_567870.1| leucine-rich repeat transmembrane protein kinase, putative; protein
           id: At4g31250.1 [Arabidopsis thaliana]
          Length = 676

 Score =  146 bits (368), Expect = 7e-35
 Identities = 78/107 (72%), Positives = 78/107 (72%)
 Frame = +3

Query: 3   SNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHGNIMELS 182
           SNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLH       
Sbjct: 400 SNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLH------- 452

Query: 183 KCLFIFIQ*NEESDEFCWIDFAANRTPGQVVLDWPIRLKIVRGVTRG 323
                                 ANRTPGQVVLDWPIRLKIVRGVTRG
Sbjct: 453 ----------------------ANRTPGQVVLDWPIRLKIVRGVTRG 477



>pir||T07865 receptor-like protein kinase PRK1 -
           tomato|gi|3015488|gb|AAC12254.1| receptor-like protein
           kinase [Lycopersicon esculentum]
          Length = 669

 Score = 99.8 bits (247), Expect = 8e-21
 Identities = 50/107 (46%), Positives = 68/107 (62%)
 Frame = +3

Query: 3   SNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHGNIMELS 182
           +N+G+E+F++HM++IGRLSH NLLP++A+YYRKEEKLLV+ Y++N SLA  LHG      
Sbjct: 402 NNVGKEDFHEHMRRIGRLSHKNLLPVVAYYYRKEEKLLVSEYVNNVSLAVHLHG------ 455

Query: 183 KCLFIFIQ*NEESDEFCWIDFAANRTPGQVVLDWPIRLKIVRGVTRG 323
                                  N++ GQ  LDWP RLKIV+GV +G
Sbjct: 456 -----------------------NKSRGQPSLDWPTRLKIVKGVAKG 479



>pir||T07862 receptor-like protein kinase PRK2 -
           tomato|gi|3015486|gb|AAC12253.1| receptor-like protein
           kinase [Lycopersicon esculentum]
          Length = 642

 Score = 97.1 bits (240), Expect = 5e-20
 Identities = 49/107 (45%), Positives = 67/107 (61%)
 Frame = +3

Query: 3   SNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHGNIMELS 182
           + +G+E+F++HM+++GRLSH NLLP+IAFYYRKEEKLLV  Y++N SLA  LHGN     
Sbjct: 378 NKVGKEDFHEHMRRLGRLSHKNLLPVIAFYYRKEEKLLVFEYVNNVSLAVYLHGN----- 432

Query: 183 KCLFIFIQ*NEESDEFCWIDFAANRTPGQVVLDWPIRLKIVRGVTRG 323
                                  +++ G   LDWP RLKIV+GV++G
Sbjct: 433 -----------------------SKSRGNQSLDWPTRLKIVKGVSKG 456



>dbj|BAB01878.1| receptor protein kinase [Arabidopsis thaliana]
          Length = 679

 Score = 93.6 bits (231), Expect = 6e-19
 Identities = 45/107 (42%), Positives = 65/107 (60%)
 Frame = +3

Query: 3   SNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHGNIMELS 182
           +N+GR+EF++HM+++GRL HPNLLP++A+YYR+EEKLL+  ++ N SLA+ LH       
Sbjct: 406 NNVGRDEFHEHMRRLGRLKHPNLLPIVAYYYRREEKLLIAEFMPNRSLASHLH------- 458

Query: 183 KCLFIFIQ*NEESDEFCWIDFAANRTPGQVVLDWPIRLKIVRGVTRG 323
                                 AN +  Q  LDWP RLKI++GV +G
Sbjct: 459 ----------------------ANHSVDQPGLDWPTRLKIIQGVAKG 483



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 83
effective length of database: 318,047,723
effective search space used: 7633145352
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)