BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Z48376.f
         (314 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T04492  protein kinase homolog F8F16.70 - Arabidopsis t...    42   0.003
ref|NP_567870.1|  leucine-rich repeat transmembrane protein ...    33   0.92 
ref|NP_700980.1|  hypothetical protein [Plasmodium falciparu...    31   3.5  

>pir||T04492 protein kinase homolog F8F16.70 - Arabidopsis
           thaliana|gi|2827520|emb|CAA16528.1| receptor kinase-like
           protein [Arabidopsis
           thaliana]|gi|7270027|emb|CAB79843.1| receptor
           kinase-like protein [Arabidopsis thaliana]
          Length = 951

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = -3

Query: 123 FIARVIYSHSVFFPLVLTDMIDE 55
           F   VIYSHSVFFPLVLTDMID+
Sbjct: 681 FSLMVIYSHSVFFPLVLTDMIDD 703




 Score = 33.1 bits (74), Expect = 0.92
 Identities = 14/17 (82%), Positives = 15/17 (87%)
 Frame = -2

Query: 313 EGDHRPSRAMTEEFXLM 263
           +GDHR SRAMTEEF LM
Sbjct: 668 DGDHRSSRAMTEEFSLM 684



>ref|NP_567870.1| leucine-rich repeat transmembrane protein kinase, putative; protein
           id: At4g31250.1 [Arabidopsis thaliana]
          Length = 676

 Score = 33.1 bits (74), Expect = 0.92
 Identities = 14/17 (82%), Positives = 15/17 (87%)
 Frame = -2

Query: 313 EGDHRPSRAMTEEFXLM 263
           +GDHR SRAMTEEF LM
Sbjct: 660 DGDHRSSRAMTEEFSLM 676



>ref|NP_700980.1| hypothetical protein [Plasmodium falciparum
           3D7]|gi|23496042|gb|AAN35704.1|AE014837_46 hypothetical
           protein [Plasmodium falciparum 3D7]
          Length = 594

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = +1

Query: 34  EQKLEALLINHIC*N*GEKN*MRINNPGNKK*KVILITYKQRHELDQQISRK--RELDEX 207
           E K E  LIN++  N   K  ++I N   KK K  +++YK+++++ +Q+S    RE+ + 
Sbjct: 283 EDKYEDALINYLE-NENPKEWIKIKNHLMKKEKYDILSYKRKNQIFEQVSENLLREIKQK 341

Query: 208 *D*WKDXREIQAFQ 249
              +K  RE + ++
Sbjct: 342 KRKYKSGREQKDYE 355



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 80
effective length of database: 322,064,861
effective search space used: 7729556664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)