BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BT002525.f
(2091 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO00885.1| Unknown protein [Arabidopsis thaliana] 1192 0.0
pir||T49741 related to stress protein p66 [imported] - Neur... 702 0.0
ref|NP_593560.1| putative WD repeat stress protein [Schizos... 441 e-122
sp|P90587|WD66_PHYPO 66 kDa stress protein (p66)|gi|7446128... 420 e-116
sp|P54686|WD42_DICDI WD-repeat protein 2|gi|1384131|gb|AAB0... 390 e-107
>gb|AAO00885.1| Unknown protein [Arabidopsis thaliana]
Length = 610
Score = 1192 bits (3083), Expect = 0.0
Identities = 596/610 (97%), Positives = 596/610 (97%)
Frame = +1
Query: 139 MASPSITLDRILAAVPVTNRGQPTQISADSKGQRIAYPCGKSIFVRSIDNPSDAKEYTGH 318
MASPSITLDRILAAVPVTNRGQPTQISADSKGQRIAYPCGKSIFVRSIDNPSDAKEYTGH
Sbjct: 1 MASPSITLDRILAAVPVTNRGQPTQISADSKGQRIAYPCGKSIFVRSIDNPSDAKEYTGH 60
Query: 319 TAPTTVARFAPNGFKVASGDSSGMLKVWEPESIESTRGEYGIISGRLNDIAWDGESQRVI 498
TAPTTVARFAPNGFKVASGDSSGMLKVWEPESIESTRGEYGIISGRLNDIAWDGESQRVI
Sbjct: 61 TAPTTVARFAPNGFKVASGDSSGMLKVWEPESIESTRGEYGIISGRLNDIAWDGESQRVI 120
Query: 499 AVGDGREQFGRCITADSGNSVGEIIGHSKSVNAVAMKPQRPFRAATVGDDGNMVFYHGAP 678
AVGDGREQFGRCITADSGNSVGEIIGHSKSVNAVAMKPQRPFRAATVGDDGNMVFYHGAP
Sbjct: 121 AVGDGREQFGRCITADSGNSVGEIIGHSKSVNAVAMKPQRPFRAATVGDDGNMVFYHGAP 180
Query: 679 YKFNNKSAQHTGFVLGAAYSPDGSSLVTVGADKRIQLYDGKTGEPTKEIGQGEHSGSIFA 858
YKFNNKSAQHTGFVLGAAYSPDGSSLVTVGADKRIQLYDGKTGEPTKEIGQGEHSGSIFA
Sbjct: 181 YKFNNKSAQHTGFVLGAAYSPDGSSLVTVGADKRIQLYDGKTGEPTKEIGQGEHSGSIFA 240
Query: 859 VSWSPDGKKFVTASADQSVKLWDVDAGSVIQTWKFGEXXXXXXXXXXXXXXPGRSDGLII 1038
VSWSPDGKKFVTASADQSVKLWDVDAGSVIQTWKFGE PGRSDGLII
Sbjct: 241 VSWSPDGKKFVTASADQSVKLWDVDAGSVIQTWKFGEDVSVGDQQVGVVFVPGRSDGLII 300
Query: 1039 SLSLAGNLAYLTEGKPEPVRVVYGHGKSITALSTGSDGKGADLWSGSFDGRVCHWDVTSG 1218
SLSLAGNLAYLTEGKPEPVRVVYGHGKSITALSTGSDGKGADLWSGSFDGRVCHWDVTSG
Sbjct: 301 SLSLAGNLAYLTEGKPEPVRVVYGHGKSITALSTGSDGKGADLWSGSFDGRVCHWDVTSG 360
Query: 1219 IATVVDGQAHTNQVAQFATADGKVLSAGWDDTLRIVDEPAKTFLGTSIKLQAQPKGVSAA 1398
IATVVDGQAHTNQVAQFATADGKVLSAGWDDTLRIVDEPAKTFLGTSIKLQAQPKGVSAA
Sbjct: 361 IATVVDGQAHTNQVAQFATADGKVLSAGWDDTLRIVDEPAKTFLGTSIKLQAQPKGVSAA 420
Query: 1399 NGLVYVATYSGVSVYSGEKLVSEQSFDFTPDAIAASGSFVAIGANDNSVRIYNASSNGKL 1578
NGLVYVATYSGVSVYSGEKLVSEQSFDFTPDAIAASGSFVAIGANDNSVRIYNASSNGKL
Sbjct: 421 NGLVYVATYSGVSVYSGEKLVSEQSFDFTPDAIAASGSFVAIGANDNSVRIYNASSNGKL 480
Query: 1579 EEVKSLSNPTGTISALAFSKGGSHLAAGNSVGKIYVYSAGSWELVADRWSAHTARVTAIA 1758
EEVKSLSNPTGTISALAFSKGGSHLAAGNSVGKIYVYSAGSWELVADRWSAHTARVTAIA
Sbjct: 481 EEVKSLSNPTGTISALAFSKGGSHLAAGNSVGKIYVYSAGSWELVADRWSAHTARVTAIA 540
Query: 1759 WDDTGAYAASGSLDTNVFIWCLEKRNQGKRIKAANAHKDGVNGVAWVEGGRVASAGGDAN 1938
WDDTGAYAASGSLDTNVFIWCLEKRNQGKRIKAANAHKDGVNGVAWVEGGRVASAGGDAN
Sbjct: 541 WDDTGAYAASGSLDTNVFIWCLEKRNQGKRIKAANAHKDGVNGVAWVEGGRVASAGGDAN 600
Query: 1939 VKIWKVQDLP 1968
VKIWKVQDLP
Sbjct: 601 VKIWKVQDLP 610
>pir||T49741 related to stress protein p66 [imported] - Neurospora crassa
Length = 618
Score = 702 bits (1811), Expect = 0.0
Identities = 360/620 (58%), Positives = 449/620 (72%), Gaps = 15/620 (2%)
Frame = +1
Query: 154 ITLDRILAAVPVTNRGQPTQISADSKGQRIAYPCGKSIFVRSIDNPSDAKEYTGHTAPTT 333
I +D+ILAA P T RGQ TQ+S D KG+RI Y GKSIFVR+ID PS + +YTGHT TT
Sbjct: 3 IEIDKILAAAPATTRGQATQLSCDPKGERIVYASGKSIFVRTIDEPSKSLQYTGHTTTTT 62
Query: 334 VARFAPNGFKVASGDSSGMLKVWEPESIESTRGEYGIISGRLNDIAWDGESQRVIAVGDG 513
VARF+P+GF VASGD SG ++VW+ E+T+GEY IISGR+NDIAWDG+SQRVIAVGDG
Sbjct: 63 VARFSPSGFWVASGDVSGKVRVWDAVGAENTKGEYSIISGRINDIAWDGDSQRVIAVGDG 122
Query: 514 REQFGRCITADSGNSVGEIIGHSKSVNAVAMKPQRPFRAATVGDDGNMVFYHGAPYKFNN 693
RE+FG TADSGNSVGE+ GHSK VNAV+++ QRP RAATV DDG+M F HGAP+KF +
Sbjct: 123 RERFGHAFTADSGNSVGEVTGHSKVVNAVSIRQQRPLRAATVSDDGSMCFLHGAPFKFAD 182
Query: 694 KSAQHTGFVLGAAYSPDGSSLVTVGADKRIQLYDGKTGEPTKEIGQGEHSGSIFAVSWSP 873
K+++H GFV G A+SPDG++LVTVGAD++IQLYDGKTG PTK IG+G H+G I+ +SW+
Sbjct: 183 KASEHKGFVTGTAFSPDGATLVTVGADRKIQLYDGKTGAPTKTIGEGVHTGGIYGISWAS 242
Query: 874 DGKKFVTASADQSVKLWDVDAGSVIQTWKFG-EXXXXXXXXXXXXXXP-GRSDGLIISLS 1047
D K FVT+SADQ+V++WD ++G +TW+FG E P GR+DGLIISL+
Sbjct: 243 DSKHFVTSSADQTVRVWDAESGKNTETWRFGPEGSVSIPDQQVGVVWPHGRTDGLIISLN 302
Query: 1048 LAGNLAYLTEGKPEPVRVVYGHGKSITALSTGSDGKGADLWSGSFDGRVCHWDVTSGIAT 1227
L G+L+YL G P+P+RVV GH K+ITAL DG+ L +GSF+GRV WD+ +G T
Sbjct: 303 LNGDLSYLVPGNPKPIRVVQGHNKNITALGASPDGQA--LLTGSFEGRVLSWDLAAGTGT 360
Query: 1228 VVDGQAHTNQVAQFA--TADGKVLSAGWDDTLRIVDEPAKTFLGTSIKLQAQPKGVSAAN 1401
VVDGQ+H+NQV QFA + G V S GWDDTLR VD A TF G S KL AQPKG++ +
Sbjct: 361 VVDGQSHSNQVTQFALSPSGGTVYSVGWDDTLRSVDVSANTFTGLSTKLSAQPKGIATTS 420
Query: 1402 G--LVYVATYSGVSVYSGEKLVSEQSFDFTPDAIAAS---GSFVAIGANDNSVRIYN-AS 1563
V VA ++G+ VY G +SE FT AIAAS GS +A+G + N+VRI++ +S
Sbjct: 421 DGKFVVVAAHTGIQVYQGPDFISELPTTFTSTAIAASPTDGSVIAVGGDGNTVRIHSLSS 480
Query: 1564 SNGKL--EEVKSLSNPTGTISALAFSKGGSHLAAGNSVGKIYVY---SAGSWELVADRWS 1728
S+G L + V L+N + IS L+FS+ G LAAGNS GKI VY +GSWE+ DRWS
Sbjct: 481 SDGTLSSQPVAVLTNSSAQISTLSFSRDGKFLAAGNSTGKIVVYRTSGSGSWEVETDRWS 540
Query: 1729 AHTARVTAIAWDDTGAYAASGSLDTNVFIWCLEKRNQGKRIKAANAHKDGVNGVAWVEGG 1908
AHTARV +IAW++ G +A SG LDTNV +W L K G R A NAHKDGVNGVAW+E G
Sbjct: 541 AHTARVLSIAWNEAGTHAVSGGLDTNVCVWSLAK--PGSRTSAPNAHKDGVNGVAWMEEG 598
Query: 1909 RVASAGGDANVKIWKVQDLP 1968
V S G D VK+WKV LP
Sbjct: 599 TVVSTGVDGAVKVWKVSGLP 618
>ref|NP_593560.1| putative WD repeat stress protein [Schizosaccharomyces
pombe]|gi|3183388|sp|O14301|YE85_SCHPO Hypothetical
WD-repeat protein C9G1.05 in chromosome
I|gi|7490153|pir||T39228 beta-transducin - fission yeast
(Schizosaccharomyces pombe)|gi|2370553|emb|CAB11489.1|
putative WD repeat stress protein [Schizosaccharomyces
pombe]
Length = 595
Score = 441 bits (1135), Expect = e-122
Identities = 236/598 (39%), Positives = 341/598 (56%), Gaps = 4/598 (0%)
Frame = +1
Query: 175 AAVPVTNRGQPTQISADSKGQRIAYPCGKSIFVRSIDNPSDAKEYTGHTAPTTVARFAPN 354
A VP T QP +I D KG+RI YP K+I +R I+ + +Y HTAPTTVARF+P+
Sbjct: 10 APVPSTKPSQPCKIGTDFKGERIVYPANKAIIIREIEKQENCFQYNEHTAPTTVARFSPS 69
Query: 355 GFKVASGDSSGMLKVWEPESIEST-RGEYGIISGRLNDIAWDGESQRVIAVGDGREQFGR 531
G+ VASGD+ G +++W+ + + + ISGR+ D+ WDG+SQR+IAVG+G+E++G
Sbjct: 70 GYYVASGDNQGNVRIWDCAGEDKILKNQVTAISGRITDLDWDGDSQRIIAVGEGKERYGH 129
Query: 532 CITADSGNSVGEIIGHSKSVNAVAMKPQRPFRAATVGDDGNMVFYHGAPYKFNNKSAQHT 711
TADSGNSVGEI GHS VNAV+++ RPFRAAT DD ++ F+HG PY+FN H+
Sbjct: 130 AFTADSGNSVGEIFGHSSVVNAVSLRKSRPFRAATASDDNSINFFHGTPYRFNRSLRVHS 189
Query: 712 GFVLGAAYSPDGSSLVTVGADKRIQLYDGKTGEPTKEIGQGEHSGSIFAVSWSPDGKKFV 891
FV YSP+ + GAD ++ ++DGKTG+ EI H GSIF++SWSPD +FV
Sbjct: 190 KFVYDVRYSPNDERFASAGADGKVYVFDGKTGDQVYEI--DAHKGSIFSISWSPDSSQFV 247
Query: 892 TASADQSVKLWDVDAGSVIQTWKFGEXXXXXXXXXXXXXXPGRSDGLIISLSLAGNLAYL 1071
T+SA S K+WD + GS+I+ W + + LII ++ GNL YL
Sbjct: 248 TSSAGYSCKIWDANTGSLIREWLSSDKKQLVGTV-------WPTKDLIIVVNSKGNLTYL 300
Query: 1072 TEGKPEPVRVVYGHGKSITALSTGSDGKGADLWSGSFDGRVCHWDVTSGIATVVDGQAHT 1251
+ + +YGH +SITA + D ++ S+DG V WD+ A + G++HT
Sbjct: 301 NPSDCKVIDTIYGHQRSITAATLSPD--ATHFYTASYDGTVLSWDIGKQKAFPLVGESHT 358
Query: 1252 NQVAQFATADGKVLSAGWDDTLRIVDEPAKTFLGTSI-KLQAQPKGVSAANGLVYVATYS 1428
NQV Q AD V++ G DDTLR++D F ++ QP GV + + + T S
Sbjct: 359 NQVMQMIMADDHVITIGMDDTLRVIDIKQGCFAKDNVFPTGYQPIGVCSVEDCLILVTVS 418
Query: 1429 GVSVYSGEKLVSEQSFDFTPDAIAAS--GSFVAIGANDNSVRIYNASSNGKLEEVKSLSN 1602
+ V VS + P A+A+ S +G D V I+ G+L EV +
Sbjct: 419 DIQVLRSLTGVSTAKTIYQPSAVASHPLKSEFCVGGEDCCVYIHTL-EKGELCEVAQCKD 477
Query: 1603 PTGTISALAFSKGGSHLAAGNSVGKIYVYSAGSWELVADRWSAHTARVTAIAWDDTGAYA 1782
T I+ LA+S G +LA G++ GK+ +Y A S E++ RW+ HT R+ ++W+ +
Sbjct: 478 STAPITCLAYSPDGKYLACGDASGKVVLYDANSREVITSRWAFHTGRILGMSWNAKSTHL 537
Query: 1783 ASGSLDTNVFIWCLEKRNQGKRIKAANAHKDGVNGVAWVEGGRVASAGGDANVKIWKV 1956
A+ SLDTN+ I+ +E+ K I NAH G V WV + S G DA +K+W V
Sbjct: 538 ATASLDTNIHIYSVER--PMKYIAMKNAHSLGATQVEWVSENELLSTGSDAAIKVWSV 593
>sp|P90587|WD66_PHYPO 66 kDa stress protein (p66)|gi|7446128|pir||JE0238 stress protein p66
- slime mold (Physarum
polycephalum)|gi|1835727|gb|AAC26321.1| 66-kDa stress
protein p66 [Physarum polycephalum]
Length = 601
Score = 420 bits (1080), Expect = e-116
Identities = 228/612 (37%), Positives = 344/612 (55%), Gaps = 8/612 (1%)
Frame = +1
Query: 151 SITLDRILAAVPVTNRGQPTQISADSKGQRIAYPCGKSIFVRSIDNPSDAKEYTGHTAPT 330
S L I + P T RG+P + D KG Y CG ++ +R+I NP+ A Y H P
Sbjct: 2 SFALKTIYSPSPATTRGKPVVLGGDPKGNNFLYTCGNAVIIRNIKNPNQADIYYEHAQPA 61
Query: 331 TVARFAPNGFKVASGDSSGMLKVWEPESIEST-RGEYGIISGRLNDIAWDGESQRVIAVG 507
TVA++AP+GF +ASGD SG L++W+ +E + E ++SG + DIAW +SQR++ VG
Sbjct: 62 TVAKYAPSGFYIASGDLSGTLRIWDTTQLEHPLKIELKVLSGPIADIAWSADSQRLVVVG 121
Query: 508 DGREQFGRCITADSGNSVGEIIGHSKSVNAVAMKPQRPFRAATVGDDGNMVFYHGAPYKF 687
DG+E+FG I DSG SVGEI GHSK++ + K RPFR T +D ++ G P+KF
Sbjct: 122 DGKERFGAAILWDSGASVGEITGHSKAIASCDFKATRPFRVITGAEDFQANWFEGPPFKF 181
Query: 688 NNKSAQHTGFVLGAAYSPDGSSLVTVGADKRIQLYDGKTGEPTKEI--GQGEHSGSIFAV 861
+ +HT F+ +SPDG ++TVG DK+ + DGKTGE + G H+ I++
Sbjct: 182 KHAFKEHTRFLTCVRFSPDGEKVLTVGLDKKGFILDGKTGEKVGALAGGADAHALGIYSC 241
Query: 862 SWSPDGKKFVTASADQSVKLWDVDAGSVIQTWKFGEXXXXXXXXXXXXXXPGRSDGLIIS 1041
SWSPD KK +T SAD+S K+WD D G+++ T+ F +++
Sbjct: 242 SWSPDSKKVLTVSADKSAKIWD-DKGTLLTTFAFEGGVESQLLGSLW------QGDTLLA 294
Query: 1042 LSLAGNLAYLTEGKPE-PVRVVYGHGKSITALSTGSDGKGADLWSGSFDGRVCHWDVTSG 1218
++L G++ L + P+ P R + GH K +T+L+ + K L+SGS+DG + W++ +G
Sbjct: 295 VNLNGDIFSLDQNNPKTPARTLKGHNKLVTSLAFDTASKA--LYSGSYDGVILQWNLETG 352
Query: 1219 IATVVDGQAHTNQVAQFATADGKVLSAGWDDTLRIVDEPAKTFLGTSIKLQAQPKGVSAA 1398
IA + G HT+ V Q K++S DDT R + KL +QP+ V+ A
Sbjct: 353 IAVPIAGTGHTSSVTQAVVQGNKLVSVSVDDTTRFTPLNPPQYAAQGAKLDSQPQSVAVA 412
Query: 1399 NG--LVYVATYSGVSVYSGEKLVSEQSFDFTPDAIAAS--GSFVAIGANDNSVRIYNASS 1566
G + V T + V V GEK+ S + + P + S GS VA+GA DNS+ IY+ S
Sbjct: 413 QGKDIAVVVTLNSVVVLQGEKVASTTAVKYQPTVVRVSVDGSEVAVGAKDNSIHIYSLSG 472
Query: 1567 NGKLEEVKSLSNPTGTISALAFSKGGSHLAAGNSVGKIYVYSAGSWELVADRWSAHTARV 1746
L E LS G ++A+A+S G H A+ + I+V+ S ++ + W H ARV
Sbjct: 473 T-TLSEQAVLSGHRGFLTAIAYSPDGKHFASADQNRDIFVWDKASRKIKVEGWVYHNARV 531
Query: 1747 TAIAWDDTGAYAASGSLDTNVFIWCLEKRNQGKRIKAANAHKDGVNGVAWVEGGRVASAG 1926
T++AW+ +GSLD++V++W + + K I NAH+ GVN V WV+ VASAG
Sbjct: 532 TSLAWNSNSNNIVTGSLDSHVYVWSVSE--PSKHIAIKNAHRGGVNAVLWVDEHTVASAG 589
Query: 1927 GDANVKIWKVQD 1962
D ++K W +++
Sbjct: 590 LDCSIKTWTIKN 601
>sp|P54686|WD42_DICDI WD-repeat protein 2|gi|1384131|gb|AAB05588.1| WD40 repeat protein 2
Length = 597
Score = 390 bits (1003), Expect = e-107
Identities = 216/609 (35%), Positives = 341/609 (55%), Gaps = 5/609 (0%)
Frame = +1
Query: 151 SITLDRILAAVPVTNRGQPTQISADSKGQRIAYPCGKSIFVRSIDNPSDAKEYTGHTAPT 330
S+TL I+A P T RG+ I+ D KG+ I Y G SI +R++ NP A Y H T
Sbjct: 2 SVTLKNIIAPTPATTRGKSVAINGDPKGENIVYASGSSIIIRNVKNPMVADIYYEHPCQT 61
Query: 331 TVARFAPNGFKVASGDSSGMLKVWEPESIEST-RGEYGIISGRLNDIAWDGESQRVIAVG 507
TVA++AP+G +ASGD G L++W+ E + Y +++G + DIAW ++QR++ VG
Sbjct: 62 TVAKYAPSGNYIASGDVQGNLRIWDTLQKEHILKATYKVLNGAILDIAWTSDNQRLVVVG 121
Query: 508 DGREQFGRCITADSGNSVGEIIGHSKSVNAVAMKPQRPFRAATVGDDGNMVFYHGAPYKF 687
DG+E+FG I DSG+S GEI GHSK + + +K RPFRAAT +D + ++ G P+KF
Sbjct: 122 DGKERFGAAILWDSGSSCGEITGHSKMILSCDIKSTRPFRAATGSEDFAVNWFEGPPFKF 181
Query: 688 --NNKSAQHTGFVLGAAYSPDGSSLVTVGADKRIQLYDGKTGEPTKEIGQG-EHSGSIFA 858
N + T FV +SPDG+ LVTVGADK+ +YDGKTGE E+ +H+G I+
Sbjct: 182 QKNIAAGDFTRFVNCVRFSPDGNKLVTVGADKKAFVYDGKTGEKLIELNPAQQHTGGIYG 241
Query: 859 VSWSPDGKKFVTASADQSVKLWDVDAGSVIQTWKFGEXXXXXXXXXXXXXXPGRSDGLII 1038
SWS D + +TASAD+S K+WD G I ++ FG ++
Sbjct: 242 CSWSADNNRVLTASADKSCKIWDTTTGQCINSFTFGSDVNDQQLGCLWFGDS------LL 295
Query: 1039 SLSLAGNLAYLT-EGKPEPVRVVYGHGKSITALSTGSDGKGADLWSGSFDGRVCHWDVTS 1215
S++LAG ++ L + +P RV+ GH K + ++ D L+S S+D + WD+++
Sbjct: 296 SVNLAGEISTLNLDDVAKPSRVIKGHNKLVGTIA--FDKNAGSLYSASYDASLLQWDLST 353
Query: 1216 GIATVVDGQAHTNQVAQFATADGKVLSAGWDDTLRIVDEPAKTFLGTSIKLQAQPKGVSA 1395
G+AT G AH NQ+ ++++ DD+++I KT+ G SI + + + V+
Sbjct: 354 GLATNFTGPAHKNQITSIKINGDQLITCAMDDSVKISSISKKTY-GESIGVDSPAQAVAF 412
Query: 1396 ANGLVYVATYSGVSVYSGEKLVSEQSFDFTPDAIAASGSFVAIGANDNSVRIYNASSNGK 1575
+ +V + + V G K+VS+ + + P ++A + + V++G DN + ++ S N
Sbjct: 413 SGDVVVAVSMKTIYVIKGGKIVSQTAATWEPTSVAINDTEVSVGGKDNKIHVFTLSGN-N 471
Query: 1576 LEEVKSLSNPTGTISALAFSKGGSHLAAGNSVGKIYVYSAGSWELVADRWSAHTARVTAI 1755
L +L N G I+ L++S G +LA+G S ++ V+S E + W HTAR+ A+
Sbjct: 472 LTASHTLDNHRGAITDLSYSPCGKYLASGCSNREVIVWSGK--EAKSKGWVNHTARINAV 529
Query: 1756 AWDDTGAYAASGSLDTNVFIWCLEKRNQGKRIKAANAHKDGVNGVAWVEGGRVASAGGDA 1935
AW + + AS SLD+ ++IW +E ++ N+H GVN V + + SAG +
Sbjct: 530 AWSNDSKFVASASLDSQIYIWNVENPT-ASPVQVKNSHLGGVNDVIYGSNNEIFSAGNEG 588
Query: 1936 NVKIWKVQD 1962
+KIW V +
Sbjct: 589 AIKIWYVSN 597
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 130
effective length of database: 255,112,561
effective search space used: 144393709526
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)