BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BT000118.f
(1275 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN15437.1| Unknown protein [Arabidopsis thaliana] 652 0.0
ref|NP_683434.1| integral membrane protein, putative; prote... 603 e-171
ref|NP_683433.1| integral membrane protein, putative; prote... 564 e-160
pir||D96589 hypothetical protein T22H22.15 [imported] - Ara... 401 e-110
emb|CAC00697.2| putative sugar transporter [Lycopersicon es... 347 2e-94
>gb|AAN15437.1| Unknown protein [Arabidopsis thaliana]
Length = 330
Score = 652 bits (1683), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Frame = -1
Query: 1272 MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV 1093
MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV
Sbjct: 1 MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV 60
Query: 1092 VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF 913
VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF
Sbjct: 61 VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF 120
Query: 912 VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP 733
VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP
Sbjct: 121 VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP 180
Query: 732 QYAKSLIVGVGLMVLHNLEGLMECFYASSISNLWGFFKFGMIAMVVVQIPMTTLGVLLMD 553
QYAKSLIVGVGLMVLHNLEGLMECFYASSISNLWGFFKFGMIAMVVVQIPMTTLGVLLMD
Sbjct: 181 QYAKSLIVGVGLMVLHNLEGLMECFYASSISNLWGFFKFGMIAMVVVQIPMTTLGVLLMD 240
Query: 552 KSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMGGI 373
KSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMGGI
Sbjct: 241 KSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMGGI 300
Query: 372 PWVIMSEVSNIHKNSLVLNILLYLIIRSMS 283
PWVIMSEVSNIHKNSLVLNILLYLIIRSMS
Sbjct: 301 PWVIMSEVSNIHKNSLVLNILLYLIIRSMS 330
>ref|NP_683434.1| integral membrane protein, putative; protein id: At1g54730.3,
supported by cDNA: gi_15450847 [Arabidopsis
thaliana]|gi|15450848|gb|AAK96695.1| Unknown protein
[Arabidopsis thaliana]
Length = 332
Score = 603 bits (1554), Expect = e-171
Identities = 314/332 (94%), Positives = 316/332 (94%), Gaps = 2/332 (0%)
Frame = -1
Query: 1272 MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV 1093
MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV
Sbjct: 1 MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV 60
Query: 1092 VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF 913
VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF
Sbjct: 61 VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF 120
Query: 912 VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP 733
VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP
Sbjct: 121 VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP 180
Query: 732 QYAKSLIVGVGLMVLHNLEGLME-CFYASSISNLWGF-FKFGMIAMVVVQIPMTTLGVLL 559
QYAKSL+VGVGLMVL G+ FYASSI G K GMIAMVVVQIPMTTLGVLL
Sbjct: 181 QYAKSLVVGVGLMVLQQFGGVNGIAFYASSIFESAGVSSKIGMIAMVVVQIPMTTLGVLL 240
Query: 558 MDKSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMG 379
MDKSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMG
Sbjct: 241 MDKSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMG 300
Query: 378 GIPWVIMSEVSNIHKNSLVLNILLYLIIRSMS 283
GIPWVIMSEVSNIHKNSLVLNILLYLIIRSMS
Sbjct: 301 GIPWVIMSEVSNIHKNSLVLNILLYLIIRSMS 332
>ref|NP_683433.1| integral membrane protein, putative; protein id: At1g54730.2
[Arabidopsis thaliana]
Length = 470
Score = 564 bits (1454), Expect = e-160
Identities = 307/373 (82%), Positives = 317/373 (84%), Gaps = 4/373 (1%)
Frame = -1
Query: 1272 MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV 1093
MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV
Sbjct: 83 MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV 142
Query: 1092 VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF 913
VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF
Sbjct: 143 VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF 202
Query: 912 VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP 733
VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP
Sbjct: 203 VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP 262
Query: 732 QYAKSLIVGVGLMVLHNLEGLME-CFYASSISNLWGF-FKFGMIAMVVVQIPMTTLGVLL 559
QYAKSL+VGVGLMVL G+ FYASSI G K GMIAMVVVQIPMTTLGVLL
Sbjct: 263 QYAKSLVVGVGLMVLQQFGGVNGIAFYASSIFESAGVSSKIGMIAMVVVQIPMTTLGVLL 322
Query: 558 MDKSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMG 379
MDKSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMG
Sbjct: 323 MDKSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMG 382
Query: 378 GIPWVIMSEVSNIH-KNSLVLNILLYLIIRSMS*EILNFIS*TYGLVLKLNNK-LFNSHM 205
GIPWVIMSE+ I K S + + + S IS T+ ++ N F
Sbjct: 383 GIPWVIMSEIFPIDIKGSAGSLVTVVSWVGSW------IISFTFNFLMNWNPAGTFYVFA 436
Query: 204 VVCGMILISVYKL 166
VCG +I V KL
Sbjct: 437 TVCGATVIFVAKL 449
Score = 38.9 bits (89), Expect = 0.17
Identities = 19/21 (90%), Positives = 20/21 (94%)
Frame = -1
Query: 75 MIKIFPIDIKGSAGSLVTVVS 13
M +IFPIDIKGSAGSLVTVVS
Sbjct: 389 MSEIFPIDIKGSAGSLVTVVS 409
>pir||D96589 hypothetical protein T22H22.15 [imported] - Arabidopsis
thaliana|gi|3776581|gb|AAC64898.1| Similar to Beta
integral membrane protein homolog gb|U43629 from A.
thaliana. [Arabidopsis thaliana]
Length = 483
Score = 401 bits (1030), Expect = e-110
Identities = 212/240 (88%), Positives = 215/240 (89%), Gaps = 11/240 (4%)
Frame = -1
Query: 1272 MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV 1093
MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV
Sbjct: 146 MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV 205
Query: 1092 VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF 913
VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF
Sbjct: 206 VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF 265
Query: 912 VIPESPRWL---------AKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSE 760
VIPESPRWL AKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSE
Sbjct: 266 VIPESPRWLKIIVRKNSQAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSE 325
Query: 759 GSIVDLFQPQYAKSLIVGVGLMVLHNLEGLME-CFYASSISNLWGF-FKFGMIAMVVVQI 586
GSIVDLFQPQYAKSL+VGVGLMVL G+ FYASSI G K GMIAMVVVQ+
Sbjct: 326 GSIVDLFQPQYAKSLVVGVGLMVLQQFGGVNGIAFYASSIFESAGVSSKIGMIAMVVVQV 385
Score = 38.9 bits (89), Expect = 0.17
Identities = 19/21 (90%), Positives = 20/21 (94%)
Frame = -1
Query: 75 MIKIFPIDIKGSAGSLVTVVS 13
M +IFPIDIKGSAGSLVTVVS
Sbjct: 402 MSEIFPIDIKGSAGSLVTVVS 422
>emb|CAC00697.2| putative sugar transporter [Lycopersicon esculentum]
Length = 480
Score = 347 bits (890), Expect = 2e-94
Identities = 171/314 (54%), Positives = 226/314 (71%), Gaps = 2/314 (0%)
Frame = -1
Query: 1272 MIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFV 1093
MIGA SG IAD IGR+ M S FC+ GWLAI+ ++ A+ LD+GR GYGMGVFS+V
Sbjct: 95 MIGAITSGPIADYIGRKGAMRMSSGFCVAGWLAIFFAQGALALDIGRLATGYGMGVFSYV 154
Query: 1092 VPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLF 913
VPV+IAEI PK LRG TT++QL+IC GVSV++++G+ + WR LAL G+IPC + + GLF
Sbjct: 155 VPVFIAEIAPKDLRGALTTINQLMICCGVSVSFIIGTMMTWRTLALTGLIPCAILLFGLF 214
Query: 912 VIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQP 733
+IPESPRWLAK+G +EFE+AL++LRG+ ADIS E+ EIKDY L L + ++ DLFQ
Sbjct: 215 IIPESPRWLAKIGHQKEFELALRKLRGKDADISEEAAEIKDYIETLEKLPKVNLFDLFQR 274
Query: 732 QYAKSLIVGVGLMVLHNLEGLME-CFYASSISNLWGFFK-FGMIAMVVVQIPMTTLGVLL 559
+Y+ SLIVGVGLMV G+ CFY SI GF G I ++Q+P+T LG L
Sbjct: 275 RYSSSLIVGVGLMVFQQFGGINGICFYTGSIFESSGFSSDIGTIIYAIIQVPITALGAAL 334
Query: 558 MDKSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMG 379
+D++GR+PLLL+S TG IGC L G+SF ++ + A LA+TG+LVY GSFS+GMG
Sbjct: 335 IDRTGRKPLLLVSGTGLVIGCILTGISFYMKGHEMAIKAAPILAVTGILVYIGSFSVGMG 394
Query: 378 GIPWVIMSEVSNIH 337
+PWV+MSE+ I+
Sbjct: 395 AVPWVVMSEIYPIN 408
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 126
effective length of database: 260,468,745
effective search space used: 77619686010
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)