BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 255818.f
         (610 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567045.1|  Expressed protein; protein id: At3g57165.1...   156   2e-37
ref|NP_191275.1|  hypothetical protein [Arabidopsis thaliana...   112   4e-24
gb|AAM63525.1|  unknown [Arabidopsis thaliana]                     58   8e-08
ref|NP_181673.1|  unknown protein; protein id: At2g41420.1 [...    35   0.95 
dbj|BAB40015.1|  putative wall-associated kinase 1 [Oryza sa...    32   8.1  

>ref|NP_567045.1| Expressed protein; protein id: At3g57165.1, supported by cDNA:
           255818. [Arabidopsis thaliana]
          Length = 115

 Score =  156 bits (395), Expect = 2e-37
 Identities = 82/110 (74%), Positives = 82/110 (74%)
 Frame = +3

Query: 117 KDHPRTLIHLRDNPILSKDILLRRDXXXXXXXXXXXXRRGTLNKDILNKVTHLSNNSNRN 296
           KDHPRTLIHLRDNPILSKDILLRRD            RRGTLNKDILNKVTHLSNNSNRN
Sbjct: 6   KDHPRTLIHLRDNPILSKDILLRRDILNKVILLKVILRRGTLNKDILNKVTHLSNNSNRN 65

Query: 297 TXXXXXXXXXXXXXXXXSWTLASEWRSPLEAAKLVYTDDLISFSFVSLQT 446
           T                SWTLASEWRSPLEAAKLVYTDDLISFSFVSLQT
Sbjct: 66  TVLVCLKDVLLLCAVTVSWTLASEWRSPLEAAKLVYTDDLISFSFVSLQT 115



>ref|NP_191275.1| hypothetical protein [Arabidopsis thaliana]|gi|11281190|pir||T47776
           hypothetical protein F24I3.240 - Arabidopsis
           thaliana|gi|6911886|emb|CAB72186.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 182

 Score =  112 bits (280), Expect = 4e-24
 Identities = 58/79 (73%), Positives = 62/79 (78%)
 Frame = -3

Query: 344 SNSTEQQYILQAYQDCVSVAVVAEVGNLVEDILVQGTPAXXXXXXXXXXXDIPAEEDILA 165
           SN+ +  +  Q+Y DCVSVAVVAEVGNLVEDILVQGTPA           DIPAEEDILA
Sbjct: 96  SNTAKANHHTQSYPDCVSVAVVAEVGNLVEDILVQGTPAEDNLEEDNLVEDIPAEEDILA 155

Query: 164 EDRVVPEVDKRPWVVLPPD 108
           EDRVVPEVDKRPWVVLPPD
Sbjct: 156 EDRVVPEVDKRPWVVLPPD 174




 Score = 41.2 bits (95), Expect = 0.010
 Identities = 19/21 (90%), Positives = 20/21 (94%)
 Frame = -1

Query: 379 GDLHSEASVQDTATAQSSNTS 317
           GDLHSEASVQDT TAQSSNT+
Sbjct: 79  GDLHSEASVQDTVTAQSSNTA 99



>gb|AAM63525.1| unknown [Arabidopsis thaliana]
          Length = 101

 Score = 58.2 bits (139), Expect = 8e-08
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +2

Query: 62  MSQQPPAVGVPPSHAYPAEGPPKDA 136
           MSQQPPAVGVPPSHAYPAEGPPKDA
Sbjct: 1   MSQQPPAVGVPPSHAYPAEGPPKDA 25



>ref|NP_181673.1| unknown protein; protein id: At2g41420.1 [Arabidopsis
           thaliana]|gi|7487447|pir||T02437 hypothetical protein
           At2g41420 [imported] - Arabidopsis
           thaliana|gi|20197423|gb|AAM15069.1| unknown protein
           [Arabidopsis thaliana]|gi|27808506|gb|AAO24533.1|
           At2g41420 [Arabidopsis thaliana]
          Length = 98

 Score = 34.7 bits (78), Expect = 0.95
 Identities = 19/27 (70%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = +2

Query: 62  MSQ--QPPAVGVPPSHAYPAEGPPKDA 136
           MSQ  QPP VGVPP   YP EG PKDA
Sbjct: 1   MSQYNQPP-VGVPPPQGYPPEGYPKDA 26



>dbj|BAB40015.1| putative wall-associated kinase 1 [Oryza sativa (japonica
           cultivar-group)]|gi|20161659|dbj|BAB90577.1| putative
           wall-associated kinase 1 [Oryza sativa (japonica
           cultivar-group)]
          Length = 565

 Score = 31.6 bits (70), Expect = 8.1
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -1

Query: 601 RVQSLDEARKKKQRVKANNVQHELGHPTIYIPIWQNPNNLIVTKIKCLEESQVCRETKEN 422
           ++ SLDE  K      +  +    GH T+Y  I  +   + + K K +E+S++ +   E 
Sbjct: 214 KIFSLDELEKATNNFDSTRILGSGGHGTVYKGILSDQRVVAIKKSKIVEQSEIDQFVNEV 273

Query: 421 EMRSSV 404
            M S +
Sbjct: 274 AMLSQI 279



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 117
effective length of database: 272,520,159
effective search space used: 23164213515
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)