BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= orf111d.f
         (336 letters)

Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr 
           1,347,713 sequences; 431,508,457 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_085588.1|  orf111d [Arabidopsis thaliana]|gi|1785789|...   229   5e-60
ref|NP_702608.1|  hypothetical protein [Plasmodium falciparu...    31   4.5  
gb|AAK14449.1|AF204951_23  EsV-1-23 [Ectocarpus siliculosus ...    30   5.8  
gb|AAN36985.1|AE014822_20  hypothetical protein [Plasmodium ...    30   5.8  
ref|NP_609891.1|  CG10391-PA [Drosophila melanogaster]|gi|72...    30   5.8  

>ref|NP_085588.1| orf111d [Arabidopsis thaliana]|gi|1785789|emb|CAA69786.1| orf111d
           [Arabidopsis thaliana]
          Length = 111

 Score =  229 bits (585), Expect = 5e-60
 Identities = 111/111 (100%), Positives = 111/111 (100%)
 Frame = +1

Query: 1   MKISYFIRRGKKTSRRSHFIKMKKNIITTQLFKPDNAFIFFSGIHGSVNRATYKYKISKT 180
           MKISYFIRRGKKTSRRSHFIKMKKNIITTQLFKPDNAFIFFSGIHGSVNRATYKYKISKT
Sbjct: 1   MKISYFIRRGKKTSRRSHFIKMKKNIITTQLFKPDNAFIFFSGIHGSVNRATYKYKISKT 60

Query: 181 FGRFLAHISCLICILSKRIFVLSFSVIGSFCHPSIVHFDCLLFFLDTTPCL 333
           FGRFLAHISCLICILSKRIFVLSFSVIGSFCHPSIVHFDCLLFFLDTTPCL
Sbjct: 61  FGRFLAHISCLICILSKRIFVLSFSVIGSFCHPSIVHFDCLLFFLDTTPCL 111



>ref|NP_702608.1| hypothetical protein [Plasmodium falciparum
           3D7]|gi|23497795|gb|AAN37332.1|AE014828_11 hypothetical
           protein [Plasmodium falciparum 3D7]
          Length = 1526

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 14/29 (48%), Positives = 18/29 (61%)
 Frame = +3

Query: 3   ENFIFHKKRKKNIATESLY*NEKEHYNNS 89
           ENF   KK KKNI+  S+Y N   + NN+
Sbjct: 536 ENFEIEKKGKKNISHNSMYKNNNNNNNNN 564



>gb|AAK14449.1|AF204951_23 EsV-1-23 [Ectocarpus siliculosus
           virus]|gi|13242495|ref|NP_077508.1| EsV-1-23 [Ectocarpus
           siliculosus virus]
          Length = 612

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 12/31 (38%), Positives = 16/31 (50%)
 Frame = -2

Query: 305 KRQSKWTIDGWQKDPITEKDKTKILFDKIQI 213
           KR+  WT   W K   T  +K K L DK+ +
Sbjct: 295 KREDHWTRQKWDKSTTTPSEKKKFLRDKVSM 325



>gb|AAN36985.1|AE014822_20 hypothetical protein [Plasmodium falciparum
           3D7]|gi|23509594|ref|NP_702261.1| hypothetical protein
           [Plasmodium falciparum 3D7]
          Length = 1811

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 20/83 (24%), Positives = 41/83 (49%)
 Frame = -1

Query: 318 VKKKQKTIEMDNRRMAKRSNN*ERQNKDSFR*NTNKTRYMSKKSAKGLRDFVFICRSINR 139
           +KKK+K +  DN +   + ++ +   +D F  N  +  +M  +      + ++I    N+
Sbjct: 422 IKKKKKKLVTDNTKDLNKCSSYKSSKRDKFFENIKRENHMDDQH----NENIYINIKNNK 477

Query: 138 AVYTGKKNKSVIGFEQLSCYNVL 70
           + +T KK  + I F +   YN+L
Sbjct: 478 STHTYKKKNNHI-FHKNVYYNIL 499



>ref|NP_609891.1| CG10391-PA [Drosophila melanogaster]|gi|7298462|gb|AAF53683.1|
           CG10391-PA [Drosophila
           melanogaster]|gi|11386664|sp|Q9VJ71|C310_DROME Probable
           cytochrome P450 310a1
           (CYPCCCXA1)|gi|17862670|gb|AAL39812.1| LD44491p
           [Drosophila melanogaster]
          Length = 492

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = -2

Query: 281 DGWQKDPITEKDKTKILFDKIQIRQDI*ARNLPKVFE-ILYLYVALLTEPCIPEK---KI 114
           D WQ +PI + DK   +    ++ +D+   +L  V   + +  + +L EP I EK   +I
Sbjct: 254 DKWQLEPINDADKLLSIKRLAKVAEDLLKVSLDAVASTVTFTLLEILQEPLIVEKLRAEI 313

Query: 113 KALSGLN 93
           K LS  N
Sbjct: 314 KELSNEN 320



  Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
    Posted date:  Feb 27, 2003  4:02 PM
  Number of letters in database: 431,508,457
  Number of sequences in database:  1,347,713
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 87
effective length of database: 314,257,426
effective search space used: 7542178224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)