BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= orf111c.f
         (336 letters)

Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr 
           1,347,713 sequences; 431,508,457 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_085581.1|  orf111c [Arabidopsis thaliana]|gi|1785783|...   187   3e-47
ref|XP_220855.1|  similar to WFIKKN protein precursor [Homo ...    30   10.0 

>ref|NP_085581.1| orf111c [Arabidopsis thaliana]|gi|1785783|emb|CAA69813.1| orf111c
           [Arabidopsis thaliana]
          Length = 111

 Score =  187 bits (475), Expect = 3e-47
 Identities = 91/111 (81%), Positives = 91/111 (81%)
 Frame = +1

Query: 1   MTFVPTDFLIRTPDDPAYFKDRLASPFSFRGCXXXXXXXXXXXXXXXXXXXXYFRVDPVP 180
           MTFVPTDFLIRTPDDPAYFKDRLASPFSFRGC                    YFRVDPVP
Sbjct: 1   MTFVPTDFLIRTPDDPAYFKDRLASPFSFRGCSKTTSTSSSIYSKKKASTATYFRVDPVP 60

Query: 181 RGSQSSRVCEPKTKLIVYQPGNYQKKVKRQVTDPLSLMDKVKKRIDKTEIL 333
           RGSQSSRVCEPKTKLIVYQPGNYQKKVKRQVTDPLSLMDKVKKRIDKTEIL
Sbjct: 61  RGSQSSRVCEPKTKLIVYQPGNYQKKVKRQVTDPLSLMDKVKKRIDKTEIL 111



>ref|XP_220855.1| similar to WFIKKN protein precursor [Homo sapiens] [Rattus
           norvegicus]
          Length = 571

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 172 PVPRGSQSSRVCEPKTKLI 228
           P PRG+Q+ R C+P+ KL+
Sbjct: 432 PFPRGNQNCRACKPRQKLV 450



  Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
    Posted date:  Feb 27, 2003  4:02 PM
  Number of letters in database: 431,508,457
  Number of sequences in database:  1,347,713
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 87
effective length of database: 314,257,426
effective search space used: 7542178224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)