BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= orf101b.f
         (306 letters)

Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr 
           1,347,713 sequences; 431,508,457 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69804.1|  orf101b [Arabidopsis thaliana]|gi|13449391|...   201   2e-51
gb|ZP_00066696.1|  hypothetical protein [Microbulbifer degra...    32   2.1  

>emb|CAA69804.1| orf101b [Arabidopsis thaliana]|gi|13449391|ref|NP_085573.1| orf101b
           [Arabidopsis thaliana]
          Length = 101

 Score =  201 bits (512), Expect = 2e-51
 Identities = 101/101 (100%), Positives = 101/101 (100%)
 Frame = +1

Query: 1   MIHQINSINMEIILTDVARDALQEKIVSQLSILLRVYRDTNTSESVTLPLSGVNLQEVAA 180
           MIHQINSINMEIILTDVARDALQEKIVSQLSILLRVYRDTNTSESVTLPLSGVNLQEVAA
Sbjct: 1   MIHQINSINMEIILTDVARDALQEKIVSQLSILLRVYRDTNTSESVTLPLSGVNLQEVAA 60

Query: 181 RSFFNNESIPWFFHLFRPCQSGHEKKPLCPQALELVLSFSS 303
           RSFFNNESIPWFFHLFRPCQSGHEKKPLCPQALELVLSFSS
Sbjct: 61  RSFFNNESIPWFFHLFRPCQSGHEKKPLCPQALELVLSFSS 101



>gb|ZP_00066696.1| hypothetical protein [Microbulbifer degradans 2-40]
          Length = 379

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 24/78 (30%), Positives = 36/78 (45%)
 Frame = +1

Query: 40  LTDVARDALQEKIVSQLSILLRVYRDTNTSESVTLPLSGVNLQEVAARSFFNNESIPWFF 219
           LT  A   L + I   L++ L+ Y+D   S  + L L    L  VAA S + + +I W  
Sbjct: 108 LTYTAPIVLHDSIAGYLTVTLKKYQDATRSVLMFLSLFIAALTAVAAWSLYESRAIEW-- 165

Query: 220 HLFRPCQSGHEKKPLCPQ 273
            +  P Q  H  +P  P+
Sbjct: 166 -VSSPPQK-HANRPTKPK 181



  Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
    Posted date:  Feb 27, 2003  4:02 PM
  Number of letters in database: 431,508,457
  Number of sequences in database:  1,347,713
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 77
effective length of database: 327,734,556
effective search space used: 7865629344
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)