BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At5g43510.f
         (78 letters)

Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr 
           1,347,713 sequences; 431,508,457 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97430.1|  gene_id:MWF20.23~unknown protein [Arabidops...    57   1e-07

>dbj|BAA97430.1| gene_id:MWF20.23~unknown protein [Arabidopsis
          thaliana]|gi|15239892|ref|NP_199164.1| unknown protein;
          protein id: At5g43510.1 [Arabidopsis thaliana]
          Length = 25

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +1

Query: 1  MRRGKYIRTCSFERKLCRCSISDIK 75
          MRRGKYIRTCSFERKLCRCSISDIK
Sbjct: 1  MRRGKYIRTCSFERKLCRCSISDIK 25



  Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
    Posted date:  Feb 27, 2003  4:02 PM
  Number of letters in database: 431,508,457
  Number of sequences in database:  1,347,713
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 1
effective length of database: 430,160,744
effective search space used: 10323857856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)