BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At3g54280.f
         (6150 letters)

Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr 
           1,347,713 sequences; 431,508,457 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T47587  TATA box binding protein (TBP) associated facto...  3762   0.0  
gb|AAC04573.1|  TBP-associated factor 172 [Homo sapiens]|gi|...   972   0.0  
gb|EAA01172.1|  ebiP8413 [Anopheles gambiae str. PEST]            867   0.0  
pir||T40642  probable helicase - fission yeast (Schizosaccha...   796   0.0  
pir||S22775  MOT1 protein - yeast (Saccharomyces cerevisiae)...   772   0.0  
>pir||T47587 TATA box binding protein (TBP) associated factor (TAF)-like protein -
            Arabidopsis thaliana|gi|6822074|emb|CAB71002.1| TATA box
            binding protein (TBP) associated factor (TAF)-like
            protein [Arabidopsis
            thaliana]|gi|15232471|ref|NP_190996.1| TATA box binding
            protein (TBP) associated factor (TAF) -like protein;
            protein id: At3g54280.1 [Arabidopsis thaliana]
          Length = 2049

 Score = 3762 bits (9756), Expect = 0.0
 Identities = 1935/2049 (94%), Positives = 1935/2049 (94%)
 Frame = +1

Query: 1    MAQQQSSRLNRLLTLLDTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWD 180
            MAQQQSSRLNRLLTLLDTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWD
Sbjct: 1    MAQQQSSRLNRLLTLLDTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWD 60

Query: 181  TRVAAAHAIGAIVLNVKHPSLSELLNSLATKLGEAGISDNVDEVVAFRNLQSKILANAPF 360
            TRVAAAHAIGAIVLNVKHPSLSELLNSLATKLGEAGISDNVDEVVAFRNLQSKILANAPF
Sbjct: 61   TRVAAAHAIGAIVLNVKHPSLSELLNSLATKLGEAGISDNVDEVVAFRNLQSKILANAPF 120

Query: 361  RSFEMNKVLEFGALLASGGQEYDILNDNSKNPRDRVARQKKNLRRRLGLDMCEQFMDVNE 540
            RSFEMNKVLEFGALLASGGQEYDILNDNSKNPRDRVARQKKNLRRRLGLDMCEQFMDVNE
Sbjct: 121  RSFEMNKVLEFGALLASGGQEYDILNDNSKNPRDRVARQKKNLRRRLGLDMCEQFMDVNE 180

Query: 541  MIRDEDLIEQKSNVPANGVGNRLYANCSPHHIQQFVSRMVPRVNSRRPSARELNLLKRKA 720
            MIRDEDLIEQKSNVPANGVGNRLYANCSPHHIQQFVSRMVPRVNSRRPSARELNLLKRKA
Sbjct: 181  MIRDEDLIEQKSNVPANGVGNRLYANCSPHHIQQFVSRMVPRVNSRRPSARELNLLKRKA 240

Query: 721  KISSKDQAKGSCEVADVEMSSSHVASTSKRILSDSLDSSKADIGNEDDIEPDGDGKWPFH 900
            KISSKDQAKGSCEVADVEMSSSHVASTSKRILSDSLDSSKADIGNEDDIEPDGDGKWPFH
Sbjct: 241  KISSKDQAKGSCEVADVEMSSSHVASTSKRILSDSLDSSKADIGNEDDIEPDGDGKWPFH 300

Query: 901  SFVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAGVSTEEFSSDNGFELKDVLNKVTR 1080
            SFVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAGVSTEEFSSDNGFELKDVLNKVTR
Sbjct: 301  SFVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAGVSTEEFSSDNGFELKDVLNKVTR 360

Query: 1081 EREIDLNMQVSENELEPLRKRPKIEDPSKSFIDNTVLEVIGGDYDINVKDEDAEFLLPPV 1260
            EREIDLNMQVSENELEPLRKRPKIEDPSKSFIDNTVLEVIGGDYDINVKDEDAEFLLPPV
Sbjct: 361  EREIDLNMQVSENELEPLRKRPKIEDPSKSFIDNTVLEVIGGDYDINVKDEDAEFLLPPV 420

Query: 1261 KVNGQTDCSSTKLEPQSSMDDSTSHSEINHVAEVNNHFEDKSFIEEPVIPKQQEENLEVL 1440
            KVNGQTDCSSTKLEPQSSMDDSTSHSEINHVAEVNNHFEDKSFIEEPVIPKQQEENLEVL
Sbjct: 421  KVNGQTDCSSTKLEPQSSMDDSTSHSEINHVAEVNNHFEDKSFIEEPVIPKQQEENLEVL 480

Query: 1441 DLVKQARHSWIKNFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYM 1620
            DLVKQARHSWIKNFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYM
Sbjct: 481  DLVKQARHSWIKNFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYM 540

Query: 1621 NPSLIYETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGYILPACKAGLEDS 1800
            NPSLIYETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGYILPACKAGLEDS
Sbjct: 541  NPSLIYETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGYILPACKAGLEDS 600

Query: 1801 XXXXXXXXXXXXXXXXXXIVSLRGQTLLSIVMXXXXXXXXXXXXSPSTSSIMNLLAEIYS 1980
                              IVSLRGQTLLSIVM            SPSTSSIMNLLAEIYS
Sbjct: 601  DDDVRAVAADALIPAAAAIVSLRGQTLLSIVMLLWDILLELDDLSPSTSSIMNLLAEIYS 660

Query: 1981 QDDMTLVMHEELSLGEEQNIELNEMGHIESIGERRDVKESPYALSGLAPRLWPFTRHDIT 2160
            QDDMTLVMHEELSLGEEQNIELNEMGHIESIGERRDVKESPYALSGLAPRLWPFTRHDIT
Sbjct: 661  QDDMTLVMHEELSLGEEQNIELNEMGHIESIGERRDVKESPYALSGLAPRLWPFTRHDIT 720

Query: 2161 SVRFSAIRTLERLLEAGCRKNISGQSKSSFWPSSILGDTLRIVFQNLLLESTEEILECSE 2340
            SVRFSAIRTLERLLEAGCRKNISGQSKSSFWPSSILGDTLRIVFQNLLLESTEEILECSE
Sbjct: 721  SVRFSAIRTLERLLEAGCRKNISGQSKSSFWPSSILGDTLRIVFQNLLLESTEEILECSE 780

Query: 2341 RVWRLLVQCPVDDLEDTAKFYMASWIELAATPYGSTLDATKMFWPVAPPRKSHFKAAAKM 2520
            RVWRLLVQCPVDDLEDTAKFYMASWIELAATPYGSTLDATKMFWPVAPPRKSHFKAAAKM
Sbjct: 781  RVWRLLVQCPVDDLEDTAKFYMASWIELAATPYGSTLDATKMFWPVAPPRKSHFKAAAKM 840

Query: 2521 KAVKLENEASSILGFDYARSSASLEKQEDASARSTKIIVGSDMEMSVTRTRVVTASALGI 2700
            KAVKLENEASSILGFDYARSSASLEKQEDASARSTKIIVGSDMEMSVTRTRVVTASALGI
Sbjct: 841  KAVKLENEASSILGFDYARSSASLEKQEDASARSTKIIVGSDMEMSVTRTRVVTASALGI 900

Query: 2701 FASRLREGSMQFVVDPLSSTLTSMSGVQRQVGSIVLISWFRETKCKAPSDGSGSLPGFPS 2880
            FASRLREGSMQFVVDPLSSTLTSMSGVQRQVGSIVLISWFRETKCKAPSDGSGSLPGFPS
Sbjct: 901  FASRLREGSMQFVVDPLSSTLTSMSGVQRQVGSIVLISWFRETKCKAPSDGSGSLPGFPS 960

Query: 2881 PLKKWLLDLLACADPAFPTKDIFLPYAELSRTYTKMRNEASQLLHTVETCHCFDKLLSTN 3060
            PLKKWLLDLLACADPAFPTKDIFLPYAELSRTYTKMRNEASQLLHTVETCHCFDKLLSTN
Sbjct: 961  PLKKWLLDLLACADPAFPTKDIFLPYAELSRTYTKMRNEASQLLHTVETCHCFDKLLSTN 1020

Query: 3061 KLNVESVTADETIDFASTLDLWNKESAGNESLEKQVFEDVESSRQQLLSTAGYLKCVQSN 3240
            KLNVESVTADETIDFASTLDLWNKESAGNESLEKQVFEDVESSRQQLLSTAGYLKCVQSN
Sbjct: 1021 KLNVESVTADETIDFASTLDLWNKESAGNESLEKQVFEDVESSRQQLLSTAGYLKCVQSN 1080

Query: 3241 LHITVTSLVAAAVVWMSEFPARLNPIILPLMASIKRXXXXXXXXXXXXXXXXXXXYCVDR 3420
            LHITVTSLVAAAVVWMSEFPARLNPIILPLMASIKR                   YCVDR
Sbjct: 1081 LHITVTSLVAAAVVWMSEFPARLNPIILPLMASIKREQEQILQQIAAEALAELIAYCVDR 1140

Query: 3421 KPSPNDKLIKNICSLTCMDPSETPQAXXXXXXXXXXXXXFLSSRSNTGKQKAKVVLASGE 3600
            KPSPNDKLIKNICSLTCMDPSETPQA             FLSSRSNTGKQKAKVVLASGE
Sbjct: 1141 KPSPNDKLIKNICSLTCMDPSETPQASIISSMDIVDDMDFLSSRSNTGKQKAKVVLASGE 1200

Query: 3601 DRSKVEGFITRRGSELALKHLSLKFGGSLFDKLPKLWECLTEVLVPEIPSDQQKIDLKIE 3780
            DRSKVEGFITRRGSELALKHLSLKFGGSLFDKLPKLWECLTEVLVPEIPSDQQKIDLKIE
Sbjct: 1201 DRSKVEGFITRRGSELALKHLSLKFGGSLFDKLPKLWECLTEVLVPEIPSDQQKIDLKIE 1260

Query: 3781 SISDPQVVRSIAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVMTMAKSMTTDV 3960
            SISDPQVVRSIAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVMTMAKSMTTDV
Sbjct: 1261 SISDPQVVRSIAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVMTMAKSMTTDV 1320

Query: 3961 MAAVVESAIPMLGDLTCISGRQGAGMXXXXXXXXXXXXXXXXXXXXXXXXXRCMSDVDSS 4140
            MAAVVESAIPMLGDLTCISGRQGAGM                         RCMSDVDSS
Sbjct: 1321 MAAVVESAIPMLGDLTCISGRQGAGMLIGLLVQGLGVELVPYSPLLVVPLLRCMSDVDSS 1380

Query: 4141 VRQSVTRSFAALVPMLPLARGVPPPVGLSKDLSSNAEDAKFLEQLLDNSHIDDYKLCTEL 4320
            VRQSVTRSFAALVPMLPLARGVPPPVGLSKDLSSNAEDAKFLEQLLDNSHIDDYKLCTEL
Sbjct: 1381 VRQSVTRSFAALVPMLPLARGVPPPVGLSKDLSSNAEDAKFLEQLLDNSHIDDYKLCTEL 1440

Query: 4321 KVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVF 4500
            KVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVF
Sbjct: 1441 KVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVF 1500

Query: 4501 PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNHNVIITSYDVVR 4680
            PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNHNVIITSYDVVR
Sbjct: 1501 PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNHNVIITSYDVVR 1560

Query: 4681 KDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLF 4860
            KDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLF
Sbjct: 1561 KDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLF 1620

Query: 4861 DFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEE 5040
            DFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEE
Sbjct: 1621 DFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEE 1680

Query: 5041 VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKAS 5220
            VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKAS
Sbjct: 1681 VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKAS 1740

Query: 5221 THVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVALQ 5400
            THVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVALQ
Sbjct: 1741 THVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVALQ 1800

Query: 5401 EILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSV 5580
            EILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSV
Sbjct: 1801 EILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSV 1860

Query: 5581 VPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQFANIEL 5760
            VPEKRFEIVKAFNSDPTIDV               SADTLVFMEHDWNPMRDHQFANIEL
Sbjct: 1861 VPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQFANIEL 1920

Query: 5761 NKLWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMN 5940
            NKLWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMN
Sbjct: 1921 NKLWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMN 1980

Query: 5941 TDQLLDLFASAETXXXXXXXXXXXXEDNDQIAGTGKGMKAILGNLEELWDQSQYTEEYNL 6120
            TDQLLDLFASAET            EDNDQIAGTGKGMKAILGNLEELWDQSQYTEEYNL
Sbjct: 1981 TDQLLDLFASAETSKKGGGSSKKGSEDNDQIAGTGKGMKAILGNLEELWDQSQYTEEYNL 2040

Query: 6121 SQFLTKLNG 6147
            SQFLTKLNG
Sbjct: 2041 SQFLTKLNG 2049
>gb|AAC04573.1| TBP-associated factor 172 [Homo
            sapiens]|gi|12643543|sp|O14981|T172_HUMAN TBP-associated
            factor 172 (TAF-172)
            (TAF(II)170)|gi|27477070|ref|NP_003963.1| BTAF1 RNA
            polymerase II, B-TFIID transcription factor-associated,
            170kDa; TBP-associated factor 172; Mot1 homolog [Homo
            sapiens]|gi|2995136|emb|CAA04475.1| TBP associated factor
            [Homo sapiens]|gi|17454125|ref|XP_051720.3| similar to
            TBP-associated factor 172 (TAF-172) (TAF(II)170) [Homo
            sapiens]
          Length = 1849

 Score =  972 bits (2513), Expect = 0.0
 Identities = 610/1625 (37%), Positives = 865/1625 (52%), Gaps = 72/1625 (4%)
 Frame = +1

Query: 1483 EFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYMNPSLIYETLNILLQ 1662
            E+L+D  IR LCV +LDRFGD++SD+VVAPVRE CAQ LG   K+MN + +++T+++LL+
Sbjct: 337  EWLEDLVIRLLCVFALDRFGDFVSDEVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLK 396

Query: 1663 MQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGYILPACKAGLEDSXXXXXXXXXXXXXX 1842
            +  + +WE+RHG LLGIKY +AVRQ+++  LL  +L     GL+D               
Sbjct: 397  LLTQEQWEVRHGGLLGIKYALAVRQDVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVP 456

Query: 1843 XXXXIVSLRGQTLLSIVMXXXXXXXXXXXXSPSTSSIMNLLAEIYSQDDMTLVMHEELSL 2022
                +V L+ Q +  I+             + ST+SIM LL+ +             L+ 
Sbjct: 457  VVESLVYLQTQKVPFIINTLWDALLELDDLTASTNSIMTLLSSL-------------LTY 503

Query: 2023 GEEQNIELNEMGHIESIGERRDVKESPYALSGLAPRLWPFTRHDITSVRFSAIRTLERLL 2202
             + Q   + +                  +L+ L PR+WPF  H I+SVR +A+ TL  LL
Sbjct: 504  PQVQQCSIQQ------------------SLTVLVPRVWPFLHHTISSVRRAALETLFTLL 545

Query: 2203 EAGCRKNISGQSKSSFWPSSILGDTLRIVFQNLLLESTEEILECSERVW-RLLVQCPVDD 2379
                    +    SS W   IL D LR +FQ  +LES++EIL+   +VW  LL +  V  
Sbjct: 546  S-------TQDQNSSSWLIPILPDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQY 598

Query: 2380 LEDTAKFYMASWIELAATPYGSTLDATKMFWPVAPPRKSHFKAAAKMKAVKLENEASSIL 2559
            +   A  +M +W+ L   P    +D   +    A  ++   K   K++  + +N+   +L
Sbjct: 599  VVAAACPWMGAWLCLMMQPSHLPIDLNMLLEVKARAKE---KTGGKVRQGQSQNK--EVL 653

Query: 2560 GFDYARSSASLEKQEDASARSTKIIVGSDMEMSVTRTRVVTASALGIFASRLREGSMQFV 2739
              +Y   + ++   ED + R          +  V R R++ A  LG     + +  +  V
Sbjct: 654  Q-EYIAGADTI--MEDPATR----------DFVVMRARMMAAKLLGALCCCICDPGVNVV 700

Query: 2740 VDPLSST----------LTSMSGVQRQVGSIVLISWFR-ETKCKAPSDGSGSLPGFPSPL 2886
               +             L S S +QR   ++V+  W   + +CKA +            +
Sbjct: 701  TQEIKPAESLGQLLLFHLNSKSALQRISVALVICEWAALQKECKAVT----------LAV 750

Query: 2887 KKWLLDLLACADPAFPTKDIFLPYAELSRTYTKMRNEASQLLHTVETCHCFDKLLSTNKL 3066
            +  LLD+L+            L Y E++  +T+M+NE  QL+ ++   H    +   N++
Sbjct: 751  QPRLLDILS----------EHLYYDEIAVPFTRMQNECKQLISSLADVH----IEVGNRV 796

Query: 3067 NVESVTADETIDFASTLDLWNKESAGNESLEKQVFEDVESSRQQLLSTAGYLKCVQSNLH 3246
            N   +T D+  D  +T+     E+  +  L  QV + ++S RQQ+  T          L 
Sbjct: 797  NNNVLTIDQASDLVTTVF---NEATSSFDLNPQVLQQLDSKRQQVQMTVTETNQEWQVLQ 853

Query: 3247 ITVTSLVAAAVVWMSEFPARLNPIILPLMASIKRXXXXXXXXXXXXXXXXXXXYCVDRKP 3426
            + V +  A AVV + + P +LNPII PLM +IK+                    C  R P
Sbjct: 854  LRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQCIAKLLQQCTTRTP 913

Query: 3427 SPNDKLIKNICSLTCMDPSETP--------------------------------QAXXXX 3510
             PN K+IKN+CS  C+DP  TP                                +     
Sbjct: 914  CPNSKIIKNLCSSLCVDPYLTPCVTCPVPTQSGQENSKGSTSEKDGMHHTVTKHRGIITL 973

Query: 3511 XXXXXXXXXFLSSRSNTGKQ-KAKVV-LASGE--------DRSKVEGFITRRGSELALKH 3660
                       S R  T K  KA++  L +G         D ++    + RRG+E AL  
Sbjct: 974  YRHQKAAFAITSRRGPTPKAVKAQIADLPAGSSGNILVELDEAQKPYLVQRRGAEFALTT 1033

Query: 3661 LSLKFGGSLFDKLPKLWECLTEVLVPEIPSDQQKIDLKI----------ESISDPQVVRS 3810
            +   FGG +  KLP LW+ +   L   I  D    D K           E ++  QV  +
Sbjct: 1034 IVKHFGGEMAVKLPHLWDAMVGPLRNTI--DINNFDGKSLLDKGDSPAQELVNSLQVFET 1091

Query: 3811 IAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVMTMAKSMTTDVMAAVVESAIP 3990
             A  M+  L P L+  LP ++ C+++   AVR  A+RCV  M+K  T + M   +E  +P
Sbjct: 1092 AAASMDSELHPLLVQHLPHLYMCLQYPSTAVRHMAARCVGVMSKIATMETMNIFLEKVLP 1151

Query: 3991 MLGDLTCISGRQGAGMXXXXXXXXXXXXXXXXXXXXXXXXXRCMSDVDSSVRQSVTRSFA 4170
             LG +     ++GA                             MSD   SVR   T+ FA
Sbjct: 1152 WLGAIDDSVKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQCFA 1211

Query: 4171 ALVPMLPLARGVPPPVGLSKDLSS-NAEDAKFLEQLLDNSHIDDYKLCTELKVQLRRYQQ 4347
             L+ ++PL  G+P P  +S +L    A++  FLEQLLD   +++YK+   +  +LR+YQQ
Sbjct: 1212 TLIRLMPLEAGIPDPPNMSAELIQLKAKERHFLEQLLDGKKLENYKIPVPINAELRKYQQ 1271

Query: 4348 EGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAER-----RGSTDELDVFPSII 4512
            +G+NWL FL ++KLHGILCDDMGLGKTLQ+  I+A D   R     R    E    PS++
Sbjct: 1272 DGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSLV 1331

Query: 4513 VCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNHNVIITSYDVVRKDVD 4692
            VCP TL GHW  E+ K+     L+ L Y G   +R+ L+ Q   HN+I+ SYDVVR D+D
Sbjct: 1332 VCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVASYDVVRNDID 1391

Query: 4693 YLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLM 4872
            +     +NYCILDEGH+IKN K+K++ AVKQL A +R+ILSGTPIQNN++ELWSLFDFLM
Sbjct: 1392 FFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLM 1451

Query: 4873 PGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSD 5052
            PGFLGTERQF A YGKP+LA+RD + S+++ EAGVLAM+ALH+QV+PFLLRR KE+VL D
Sbjct: 1452 PGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQD 1511

Query: 5053 LPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVF 5232
            LP KIIQD YC LSP+Q++LYE F+ S AK ++     V  +  S   +    KA+ HVF
Sbjct: 1512 LPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDE--TVSSATLSEETEKPKLKATGHVF 1569

Query: 5233 QALQYLLKLCSHPLLVLGDKVTE-PVASDLAAMINGCSDIITELHKVQHSPKLVALQEIL 5409
            QALQYL KLC+HP LVL  +  E    ++  A+ N      + LH +QH+PKL AL+++L
Sbjct: 1570 QALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQN------SSLHDIQHAPKLSALKQLL 1623

Query: 5410 EECGIGSDASSSDGTLS-VGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVP 5586
             +CG+G+ ++S  GT S V QHR+LIF Q K++LDI+E DL + H+ SVTY+RLDGS+ P
Sbjct: 1624 LDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPP 1683

Query: 5587 EKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQFANIELNK 5766
             +R  IV  FN+DP+IDV                ADT+VF+EHDWNPMRD          
Sbjct: 1684 GQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD---------- 1733

Query: 5767 LWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMNTD 5946
              QAMDRAHR+GQKRVVNV+RLI RGTLEEK+M LQKFK+++ANTVI+ EN+S+++M TD
Sbjct: 1734 -LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTD 1792

Query: 5947 QLLDLFASAETXXXXXXXXXXXXEDNDQIAGTGKGMKAILGNLEELWDQSQYTEEYNLSQ 6126
            QLLDLF                 E  D        MK+IL NL +LWDQ QY  EY+L  
Sbjct: 1793 QLLDLF---------TLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSLEN 1843

Query: 6127 FLTKL 6141
            F+  L
Sbjct: 1844 FMHSL 1848

 Score =  174 bits (440), Expect = 2e-41
 Identities = 119/343 (34%), Positives = 183/343 (52%), Gaps = 12/343 (3%)
 Frame = +1

Query: 19   SRLNRLLTLLDTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWDTRVAAA 198
            SRL+RL  LLDTG+T  TR  AA+Q+G++ K HP +L++LL KVL +LRS  WDTR+AA 
Sbjct: 4    SRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRIAAG 63

Query: 199  HAIGAIVLNVKHPSLSELLNSLATKLGEAGISDNVDEVVAFRNLQSKILANAPFRSFEMN 378
             A+ AIV NV  P  + +  +      E+ + D            S       F  F++ 
Sbjct: 64   QAVEAIVKNV--PEWNPVPRTRQEPTSESSMED------------SPTTERLNFDRFDIC 109

Query: 379  KVLEFGA-LLASGGQEYDILNDNS--KNPRDRVARQKKNLRRRLGLDMCEQF-MDVNEMI 546
            ++L+ GA LL S G E+++ ++ S   +P++R+ARQ+K L+++LGL+M E   M   E+ 
Sbjct: 110  RLLQHGASLLGSAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELF 169

Query: 547  RDEDLIEQKSNVPANGVGNRLYANCSPHHIQQFVSRMVPRVNSRRPSARELNLLKRKAKI 726
             DEDL    +   A+ V  +     +     +F + M         S R+ N  KR AK+
Sbjct: 170  NDEDL--DYTPTSASFVNKQPTLQAAELIDSEFRAGM---------SNRQKNKAKRMAKL 218

Query: 727  SSKDQAKGSCEVADVEMSSSHVASTSKR------ILSDSLDSSKADIGNEDDIEP--DGD 882
             +K +++ + E  +    S+      KR      +++ S + SK  I N  D     +  
Sbjct: 219  FAKQRSRDAVETNEKSNDSTDGEPEEKRRKIANVVINQSANDSKVLIDNIPDSSSLIEET 278

Query: 883  GKWPFHSFVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAG 1011
             +WP  SF E+L  D+F+P+WE+RHG+   LREIL  HG S G
Sbjct: 279  NEWPLESFCEELCNDLFNPSWEVRHGAGTGLREILKAHGKSGG 321
>gb|EAA01172.1| ebiP8413 [Anopheles gambiae str. PEST]
          Length = 1920

 Score =  867 bits (2241), Expect = 0.0
 Identities = 576/1647 (34%), Positives = 815/1647 (48%), Gaps = 95/1647 (5%)
 Frame = +1

Query: 1486 FLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYMNPSLIYETLNILLQM 1665
            +L+D T+R LCVL+LDRFGD++SDQVVAPVRE CAQ LG   + +  + +++T+ ILL  
Sbjct: 380  WLEDATLRLLCVLALDRFGDFVSDQVVAPVRETCAQVLGTVLRQLPLAKVHQTVAILLTF 439

Query: 1666 QRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGYILPACKAGLEDSXXXXXXXXXXXXXXX 1845
             ++ EWE+RHG LLGIKY++ VR++++Q  L  I+     GL D+               
Sbjct: 440  VKQKEWEVRHGGLLGIKYMLVVREDLIQTFLPVIINDVLTGLFDAVDDVGAVAASTLIPI 499

Query: 1846 XXXIVSLRGQTLLS-IVMXXXXXXXXXXXXSPSTSSIMNLLAEIYSQDDMTLVMHEELSL 2022
               +  L  +  +S IV             + + +S M LLA I S    +  +  E   
Sbjct: 500  ATWLPKLLSRAQVSHIVKLLWDLLLDQDELASACNSFMGLLASILSLPSASSWIQME--- 556

Query: 2023 GEEQNIELNEMGHIESIGERRDVKESPYALSGLAPRLWPFTRHDITSVRFSAIRTLERLL 2202
                                         +S L PRLWPF  H  +SVR S ++TL+ L 
Sbjct: 557  ----------------------------PMSMLVPRLWPFLSHCSSSVRRSTLQTLKTLK 588

Query: 2203 EAGCRKNISGQSKSSFWPSSILGDTLRIVFQNLLLESTEEILECSERVWR-LLVQCPVDD 2379
                R  ++   K   WP  +L + LR +FQ +L+E  E+I   +E VW  L+V   +  
Sbjct: 589  S---RLGLNFGVKD--WPPPLLQEALRHIFQRVLVEHVEDIQALAEDVWNNLVVNAELSA 643

Query: 2380 LEDTAKFYMASWIELAATPYGSTLDATKMFWPVAPPRKSHFKAAAKMKAVKLENEASSIL 2559
            L   +  Y++SW+ LA  P     D   + +  A P +       + +  + ++      
Sbjct: 644  LLHASCPYVSSWLCLAMQPVRLAFDPGSLIY--AKPNQPGGGPNRERRPRQFDS------ 695

Query: 2560 GFDYARSSASL---EKQEDASARSTKIIVGSD-------MEMSVTRTRVVTASALGIFAS 2709
             FD    +A+         + A   K+ +G          E +V R R   A  +G+ + 
Sbjct: 696  -FDTGGGTAACGAGHLSSSSGALHQKLFLGGAETVPLDVREKNVVRARCKAARMIGLLSR 754

Query: 2710 RL------------REGSMQFVVDPLSSTLTSMSGVQRQVGSIVLISWFRETKCKAPSDG 2853
             L             E  +      L   L S S +QR + S+V+  W            
Sbjct: 755  YLVLPAPGVTYTPETESPIDCYTKVLVGYLQSRSALQRLISSLVIAYW---------CSF 805

Query: 2854 SGSLPGFPSPLKKWLLDLLACADPAFPTKDIFLPYAELSRTYTKMRNEASQLLHTVETCH 3033
             G++   PS L++    L AC          ++ Y E+   +T++  E    L T++   
Sbjct: 806  DGTIQPGPSVLQE---RLRACLTE-------YVYYDEVGILFTRLLQECRDYLATLKQHR 855

Query: 3034 CFDKLLSTNKLNVESVTADETIDFASTLDLWNKESAGNE-SLEKQVFEDVESSRQQLLST 3210
               +L    +L V  +T D+    A+ +  W+ +      +L+ +V E +E  R+ LL +
Sbjct: 856  V--QLAEYEQLKV--LTLDQIYQIATAVGGWSADEMRTRYNLKAKVAELLEERRRSLLGS 911

Query: 3211 AGYLKCVQSNLHITVTSLVAAAVVWMSEFPARLNPIILPLMASIKRXXXXXXXXXXXXXX 3390
                   Q+ LH++  S V+ AVV +   P RLNP++ PLM SIKR              
Sbjct: 912  HSATALEQTTLHVSTQSSVSGAVVSLRCLPDRLNPVVKPLMESIKREECELLQRLSAKYL 971

Query: 3391 XXXXXYCVDRKPSPNDKLIKNICSLT-----------C-------MDPSETPQ------- 3495
                     R P PN K++ N+C+L            C        DP+ T         
Sbjct: 972  SDLLDQVTVRTPCPNSKIVTNLCTLLKSDAEFTPRVLCPDQELQHFDPANTDDSNPYHGI 1031

Query: 3496 -------------------------AXXXXXXXXXXXXXFLSSRSNTGKQKAKVVLASGE 3600
                                     A               ++ +N    +     +  E
Sbjct: 1032 LTLAKQHQRCKESGGGGGGAALDLSASSSSSAAAASSSSAATATTNAALDELLGGPSESE 1091

Query: 3601 DRSKVEGFITRRGSELALKHLSLKFGGSLFDKLPKLWECLTEVL--------VPEIPSDQ 3756
            +  +      R G+  A+  +  +FG  L  KLP LW+ L + L        V  +  D 
Sbjct: 1092 EMQRKHARTQRLGATAAITTICAQFGAQLPAKLPILWQLLLDKLQSRVDEPYVERLAQDV 1151

Query: 3757 QKIDLKIESISDPQVVRSIAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVMTM 3936
               D   + ++  Q++   AP +   L   L  LLP +   +RH    VR    RC+ T+
Sbjct: 1152 IAQDETNDFMTALQLLEVAAPYLHAALHRELFELLPKLCLLLRHPLKGVRHMVGRCLATL 1211

Query: 3937 AKSMTTDVMAAVVESAIPMLGDLTCISGRQGAGMXXXXXXXXXXXXXXXXXXXXXXXXXR 4116
            A      VM  V+   +P+L  +  +  RQGA                            
Sbjct: 1212 AAVDAASVMTMVINEVVPLLSCIESVIKRQGAAEAITCIVNRLQFEIVPYVVLLVVPLLG 1271

Query: 4117 CMSDVDSSVRQSVTRSFAALVPMLPL------ARGVPPPVGLSKDLSSNA-EDAKFLEQL 4275
             MSD D SVR   T  FA L+ ++PL        G      LS DL     +D +FLE L
Sbjct: 1272 RMSDPDQSVRLVSTHCFATLIQLMPLDGLGTSGDGGASGRHLSDDLRQRKMKDRRFLEYL 1331

Query: 4276 LDNSHIDDYKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVAS 4455
                 I D +L  ++  +LR YQQ G+NWL FL R+KLHGILCDDMGLGKTLQA  I+A+
Sbjct: 1332 FSPKTIPDVELPVKINAELRSYQQSGVNWLWFLNRYKLHGILCDDMGLGKTLQAICILAA 1391

Query: 4456 DAAER---RGSTDELDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSL 4626
            D  +R   RG        PSI++CP TL GHW +E+EK++    L  L YVG   +R  L
Sbjct: 1392 DHHQRSLDRGCAQ----LPSIVICPPTLTGHWVYEVEKFLPSRFLRPLHYVGLPGNREQL 1447

Query: 4627 REQFNNHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRL 4806
            R++   +N+I+ SYD+VRKD+++ +  +WNYCILDEGHIIKN ++K + A+KQL A HRL
Sbjct: 1448 RQKLGTYNLIVASYDIVRKDIEFFSSVNWNYCILDEGHIIKNGRTKSSKAIKQLVANHRL 1507

Query: 4807 ILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAM 4986
            ILSGTPIQNN++ELWSLFDFLMPGFLGTE+QF   + +P+LA+RDPK S K+ EAG LAM
Sbjct: 1508 ILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFSTRFSRPILASRDPKSSPKEQEAGALAM 1567

Query: 4987 EALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSA-KQEISSII 5163
            EALH+QV+PFLLRR KE+VL+DLP KI QD  C+LSP+Q +LYE FS       +I   +
Sbjct: 1568 EALHRQVLPFLLRRVKEDVLTDLPPKITQDLLCELSPLQERLYEDFSRMHLHSSDIRECL 1627

Query: 5164 K-VDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGC 5340
            + +DG          P    THVFQAL+YL  +C+HP LVL      P   +   ++   
Sbjct: 1628 ENIDGQM------AGPANKKTHVFQALRYLQNVCNHPKLVL-----SPSHPEYQMIVGEF 1676

Query: 5341 SDIITELHKVQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIE 5520
            +   + +  ++HS KL  L+++L +CGIG++       +SV QHR LIF Q KA+LDI+E
Sbjct: 1677 TRNGSSMDDIEHSAKLPVLKQLLLDCGIGTNED-----VSVNQHRALIFCQLKAMLDIVE 1731

Query: 5521 KDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTL 5700
             DL + H+ +V+Y+RLDGSV P  R  IV  FN DP+IDV                ADT+
Sbjct: 1732 NDLLKKHLPAVSYLRLDGSVPPSTRHHIVTKFNGDPSIDVLLLTTQVGGLGLNLTGADTV 1791

Query: 5701 VFMEHDWNPMRDHQFANIELNKLWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKF 5880
            +F+EHDWNPM+D            QAMDRAHR+GQK+VVNV+RLI R +LEEK+M LQKF
Sbjct: 1792 IFVEHDWNPMKD-----------LQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKF 1840

Query: 5881 KVSVANTVINAENASMKTMNTDQLLDLFASAETXXXXXXXXXXXXEDNDQIAGTGKGMKA 6060
            K+  ANTV++ ENASM TM TDQLLDLF  A+                   +  G  +K 
Sbjct: 1841 KLLTANTVVSDENASMDTMGTDQLLDLFTLADDSGKQQRAANG--------SNGGAAIKT 1892

Query: 6061 ILGNLEELWDQSQYTEEYNLSQFLTKL 6141
            +L NL ELWD SQY EEY+LSQFL  L
Sbjct: 1893 VLENLPELWDDSQYHEEYDLSQFLEGL 1919

 Score =  128 bits (321), Expect = 1e-27
 Identities = 116/387 (29%), Positives = 167/387 (42%), Gaps = 55/387 (14%)
 Frame = +1

Query: 22   RLNRLLTLLDTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWDTRVAAAH 201
            RL+RL  LL++GS   TR  AAKQIG++ K HP +L +LL ++L +L S  WDTR+AA+ 
Sbjct: 3    RLDRLFILLESGSAAVTRKAAAKQIGEVQKLHPHELHNLLSRLLTYLHSNSWDTRIAASQ 62

Query: 202  AIGAIVLNVKHPSLSELLNSLATKLGEAGISDNVDEVVAFRNLQSKILANAPFRSFEMNK 381
            A+ AI+ NV       L N L+     A  S N  +                F SF++N 
Sbjct: 63   AVQAILENVPQWEPKPLPNLLS---AHASGSRNGHQ-----------HHRLSFDSFDLNA 108

Query: 382  VLEFGA-LLASGGQEYDILNDNS-KNPRDRVARQKKNLRRRLGLDMCEQFMDVNEMIRDE 555
            VL  GA L+ S G E+D L++    + R+++ARQ+  L  +LGL      +++ E++  +
Sbjct: 109  VLFKGARLMGSEGSEFDPLDEGEVVDLREKLARQRALLNEKLGL---SSGLNLEELVTLD 165

Query: 556  DLIEQKSNVPANGVGNRLYANCSPHHIQQFVSRMVP--------RVNS-RRPSARELNLL 708
            D       V  NG G    +N   H       R+VP        R +S    S RE N  
Sbjct: 166  D-------VRNNGGGGGGGSNRDHHQTGATGERLVPVQEILKLSRADSVEGLSCREKNRA 218

Query: 709  KRKAKISSK----------------DQAKGSCEVADVEMSSSHVASTSKRILSDSLDSSK 840
            +RKA+   +                    G    A    + +    T+    ++ L+  +
Sbjct: 219  RRKARQQQQAFQNPIAAVIGAGGGGTTTVGGGTAAGNGSNGATAPGTATIGANEPLEPDR 278

Query: 841  ADIGNEDDIEPDGDG----------------------------KWPFHSFVEQLILDMFD 936
              I  E  +EP   G                             WP  SF  +L LD+F 
Sbjct: 279  KRIKTEKGVEPGTPGGAANSVPAAGTWTGEAVPDLTGAWVDAVDWPLDSFCSKLFLDLFS 338

Query: 937  PAWEIRHGSVMALREILMLHGGSAGVS 1017
            P WE RHGS  ALRE+L  H    G S
Sbjct: 339  PRWETRHGSATALRELLKSHADGGGKS 365
>pir||T40642 probable helicase - fission yeast (Schizosaccharomyces pombe)
          Length = 1953

 Score =  796 bits (2056), Expect = 0.0
 Identities = 547/1621 (33%), Positives = 810/1621 (49%), Gaps = 66/1621 (4%)
 Frame = +1

Query: 1477 NFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYMNPSLIYETLNIL 1656
            N ++  D   R  CV +LDRFGDY++DQVVAP+RE+ +Q LG    Y+    ++    +L
Sbjct: 413  NKKYFDDLLCRIACVFALDRFGDYLADQVVAPIRESVSQVLGVALIYVPNDSVFSMYKVL 472

Query: 1657 LQMQRRPE-------WEIRHGSLLGIKYLVAVRQEML---QDLLGYILPACKAGLEDSXX 1806
              +  + E       WE  HG +LGIKYLVAV+  +     D L  ++     GL +   
Sbjct: 473  HSLVFQNELGLTNTVWEAAHGGMLGIKYLVAVKYPLFFSHSDYLDSLINTVIHGLANHDD 532

Query: 1807 XXXXXXXXXXXXXXXXIVSLRGQTLLSIV-MXXXXXXXXXXXXSPSTSSIMNLLAEIYSQ 1983
                            +V  +  +  +++ +            S STS +M+LL+ + S 
Sbjct: 533  DVRAVSALTLLPIADKLVQEKLSSCKNLLKVLWDCLDDVKDDLSSSTSCVMDLLSSLCSF 592

Query: 1984 DDMTLVMHEELSLGEEQNIELNEMGHIESIGERRDVKESPYALSGLAPRLWPFTRHDITS 2163
             ++  +M E  +   E + E                         L PRL+   R+ +T 
Sbjct: 593  TEVMNLMQETANSDPEFSFET------------------------LVPRLFHLMRYTLTG 628

Query: 2164 VRFSAIRTLERLLEAGCRKNISGQSKSSFWPSSILGDTLRIVFQNLLLESTEEI----LE 2331
            VR S +  L +         IS Q+  S+    I G TLR+ FQN+LLE  E+I     E
Sbjct: 629  VRRSVVYALTKF--------ISVQTSCSW----ITGLTLRLCFQNVLLEQQEDISKSSCE 676

Query: 2332 CSERVWRLLVQCPVDDLEDTAKFYMASWIELAATPYGS-----TLDATKMFWPVAPPRKS 2496
             ++RV  +L +   +        ++   ++++ TP GS      LD T +  P   P   
Sbjct: 677  LAQRVMDILYRDGPESFSKLLYSHIEPMLKVSITPIGSFRRPYPLDTTLIVKPSGQPYAP 736

Query: 2497 HFKAAAKMKAVKLENEASSILGFDYARSSASLEKQEDASARSTKIIVGSDMEMSVTRTRV 2676
                       +L N  +     D  + S      E       + +     E  + + R+
Sbjct: 737  STSRERNNNISELSNSRTKHRAKDDPKGSFCFSVDEPMLNGDVEFVG----EERMLKARL 792

Query: 2677 VTASALGIFASRLREGSMQFVVDP-LSSTLTSMSGVQRQVGSIVLISWFRETKCKAPSDG 2853
              +S LG    R +   +     P L + LTS       +GS ++ S+F         D 
Sbjct: 793  RASSLLGRIIGRWKRDEILLFFKPFLQACLTSSFSTPVVLGSRLIESFFEV------EDN 846

Query: 2854 SGSLPGFPSPLKKWLLDLLACADPAFPTKDIFLPYAELSRTYTKMRNEASQLLHT-VETC 3030
              ++       K  L  LL       P ++    YA L      +R + + LL+T ++  
Sbjct: 847  DLTIQ------KDELYHLLCDQFATVPREN----YANLVSQLHVVRAQCNALLNTFLDVG 896

Query: 3031 HCFDKLLSTNKLNVESVTADETIDFASTLDLWNKESAGNESLEKQVFEDVESSRQQLLST 3210
                  + +  + V+       I F    D         E+L K +    ++   + L+ 
Sbjct: 897  RLSRSKIPSLAVVVKGDPEAGPIAFGIA-DAEKLVGPTYENLCKLLSPSQKAQSSKALNE 955

Query: 3211 AGYL--------KCVQSNLHITVTSLVAAAVVWMSEFPARLNPIILPLMASIKRXXXXXX 3366
              YL        K  +    I  ++ +A+A+V   + P +LN II  +M SIK+      
Sbjct: 956  IKYLIIDEISIYKIAKERQDIQCSASIASAMVTYDKLPKKLNSIIKGIMESIKKEQFSCL 1015

Query: 3367 XXXXXXXXXXXXXYCV-DRKPSPNDKLIKNICSLTCMDPSETPQAXXXXXXXXXXXXXFL 3543
                          C  + +   ++K+++N+C+  CMD +ETP                 
Sbjct: 1016 QMHSASAMMKLISACYKESRQVISEKIVRNLCAYVCMDTTETPIFHDSGKNGILSLHSIG 1075

Query: 3544 SSRSNTGKQKAKVVLASGE---DRS--------KVEGFITRRGSELALKHLSLKFGGSLF 3690
            +S  N  +   K+V  S +   DR         K    + R G++L L+ ++  FG SLF
Sbjct: 1076 TSDDNDEQVSGKLVDDSDDVSNDRKSSLSSVSDKDAAVLQRMGAQLTLQQMAQNFGSSLF 1135

Query: 3691 DKLPKLWECLTEVLVPEIPS------DQQKIDLKIESISDPQVVRSIAPVMEETLKPRLL 3852
             ++P L +CL   L     S      DQ    +  + +    ++R +   ++  L+  ++
Sbjct: 1136 SRVPVLSQCLFVPLQQYAESGFPSEVDQASCTVGQDLLDAMSILRFLVAYLDSGLQSEIV 1195

Query: 3853 SLLPCIFKCVRHSHVAVRLAASRC--VMTMAKSMTTDVMAAVVESAIPMLGDLTCISGRQ 4026
            S LP +   ++ ++ AVR  AS+C   +T + +  +  +  +VE  +P+LGD +    RQ
Sbjct: 1196 STLPHLLATLQSNYSAVRNMASKCFAAITESNAAGSKALHLLVEDVVPLLGDASSTIHRQ 1255

Query: 4027 GAGMXXXXXXXXXXXXXXXXXXXXXXXXXRCMSDVDSSVRQSVTRSFAALVPMLPLARGV 4206
            GA                             MSD D  VR   T SFA LV ++PL  G+
Sbjct: 1256 GAIECIYHVVQRLGVRILPYILYLIIPLLGRMSDADQDVRVLATTSFATLVKLVPLEAGL 1315

Query: 4207 PPPVGLSKDL-SSNAEDAKFLEQLLDNSHIDDYKLCTELKVQLRRYQQEGINWLGFLKRF 4383
            P P  L + L  S  ++ KFLEQ+L+ S ++ + +   +   LR+YQQEG+NWL FL ++
Sbjct: 1316 PDPPDLPQYLLDSREKERKFLEQMLNPSKVEAFSIPVPISADLRKYQQEGVNWLAFLNKY 1375

Query: 4384 KLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDV-----FPSIIVCPSTLVGHWAF 4548
            +LHGILCDDMGLGKTLQ   IVASD   R+   +E         PS+IVCPSTL GHW  
Sbjct: 1376 ELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGHWQQ 1435

Query: 4549 EIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNHNVIITSYDVVRKDVDYLTQFSWNYCIL 4728
            E+  Y     L V  YVG   +R  +R +    +V++TSYD+ R DVD L +  WNYC+L
Sbjct: 1436 ELSTYAPF--LKVSAYVGPPAERAKIRSKMKKSDVVVTSYDICRNDVDELVKIDWNYCVL 1493

Query: 4729 DEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQA 4908
            DEGH+IKNA++K+T AVK L++ HRLILSGTPIQNN++ELWSLFDFLMPGFLGTE+ FQ 
Sbjct: 1494 DEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQE 1553

Query: 4909 SYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCD 5088
             + +P+ A+RD K S+K+ E G LA+EA+HKQV+PF+LRR KE+VL+DLP KIIQD YCD
Sbjct: 1554 RFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADLPPKIIQDYYCD 1613

Query: 5089 LSPVQLKLYEQF-SGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCS 5265
            +S +Q KL   F S  +  +E+      D   +             H+FQALQY+ KLC+
Sbjct: 1614 MSDLQRKLLNDFVSQLNINEELE-----DDETEKTQGTRKKKSQKAHIFQALQYMRKLCN 1668

Query: 5266 HPLLVLGDK--VTEPVASDLAAMINGCSDIITELHKVQHSPKLVALQEILEECGIGSDAS 5439
            HP L+L +K      +   LA   +G       LH ++H+PKL AL ++L +CG+G+ + 
Sbjct: 1669 HPALILTEKHPKRNAIVKQLAKENSG-------LHDLKHAPKLTALGQLLRDCGLGNSSV 1721

Query: 5440 SSDG-----TLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEI 5604
            +S+G     T +V +HRVLIF Q K +LD++EKDL QA M  VTYMRLDGSV P KR E 
Sbjct: 1722 NSNGIDSALTNAVSEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEA 1781

Query: 5605 VKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQFANIELNKLWQAMD 5784
            V  FN+DP+IDV                ADT++F+EHDWNPMRD            QAMD
Sbjct: 1782 VTKFNNDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRD-----------LQAMD 1830

Query: 5785 RAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQLLDLF 5964
            RAHR+GQK+VVNV+RLI RG LEEK+M LQ+FK++VA+TV+N +NA + ++ TDQ+LDLF
Sbjct: 1831 RAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQQNAGLSSIGTDQILDLF 1890

Query: 5965 ASAETXXXXXXXXXXXXEDNDQIAGTGKG--MKAILGNLEELWDQSQYTEEYNLSQFLTK 6138
             +  T            E+++  AG G     K  L  L E+WD+SQY +E+NL  F++ 
Sbjct: 1891 NT--TADEQQTVQNIDKEESEDAAGRGLSGTSKKALEGLPEMWDESQY-DEFNLDGFIST 1947

Query: 6139 L 6141
            L
Sbjct: 1948 L 1948

 Score =  127 bits (318), Expect = 3e-27
 Identities = 120/429 (27%), Positives = 180/429 (40%), Gaps = 87/429 (20%)
 Frame = +1

Query: 16   SSRLNRLLTLLDTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWDTRV-- 189
            ++RL+RL+ LLD+GST   R TAAKQIGDI K HP +L +LL +V+ +L+SK WDTRV  
Sbjct: 2    TTRLDRLVVLLDSGSTSVVRETAAKQIGDIQKVHPDELYNLLGRVVPYLKSKNWDTRVAA 61

Query: 190  ------------------------------------------------AAAHAIGAIVLN 225
                                                            A A +   +V++
Sbjct: 62   AKAIGGIVENVPVWNPNRTSPVKKEETEDLPSFNGDTEEKPFIKTEEGAPASSQSQVVVS 121

Query: 226  VKHPSLSELLNSLATKLGEAGISDNVDEVVAF-------RNLQSKILAN-----APFRSF 369
                S SE+      +L     S  +  +V F       + L +++          F SF
Sbjct: 122  SNLTSNSEVSKLEEERLSTRSHSQEIKPIVDFGPDEETAKELNTELKGKFENSLLSFESF 181

Query: 370  EMNKVLEFGA-LLASGGQEYDILNDNSKNPRDRVARQKKNLRRRLGLDMCEQFMDVNEMI 546
            ++  VL+ G  LL S  ++YD+   N  N      +Q  NL+ RL  D+  +++D     
Sbjct: 182  DIANVLKAGKKLLGSASRDYDV---NPANYSTHYLQQLSNLKSRL--DLAGEYLD----- 231

Query: 547  RDEDLIEQKSNVPANGVGNRLYANCSPHHIQQFVSRMVPRVNSRRP------------SA 690
             D  + +   NV +N  G+       P H           +N+ +P            SA
Sbjct: 232  -DSIMNDLGDNVGSNSKGSP--TTSIPEHKTS--------INNNKPEDTPTPSENVHLSA 280

Query: 691  RELNLLKRKAKISSKDQAKGSCEVADVEMSSSHVASTSKRIL-----------SDSLD-S 834
            R+ N LKRKA+     Q     +VA   +   +  S++ +             SD L   
Sbjct: 281  RQRNALKRKARQMKNSQKVRVIDVAPTLVHQQNSTSSADKKTGADYNFTAQSRSDRLVVE 340

Query: 835  SKADIGNEDDIEPDGDGKWPFHSFVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAGV 1014
             KA I     +    D  WPF + VE L++DMFDP+WEIRHG+ M LREI+   G   G 
Sbjct: 341  HKAPIVPSAAVAVTSDSVWPFETLVELLLIDMFDPSWEIRHGACMGLREIIRYAGFGYGR 400

Query: 1015 STEEFSSDN 1041
               +  ++N
Sbjct: 401  VVGKSEAEN 409
>pir||S22775 MOT1 protein - yeast (Saccharomyces
            cerevisiae)|gi|1147612|gb|AAB68257.1| LPF4c; Mot1p is a
            probable helicase essential for vegetative growth on rich
            glucose medium at 30 degree C: Swiss-Prot Accession
            number P32333; similar to S. cerevisiae RAD26 gene
            product: Swiss-Prot Accession number
            P40352|gi|171965|gb|AAA34786.1|
            Mot1|gi|6325175|ref|NP_015243.1| involved in TBP
            (TATA-binding protein) regulation; Mot1p [Saccharomyces
            cerevisiae]|gi|417308|sp|P32333|MOT1_YEAST Probable
            helicase MOT1
          Length = 1867

 Score =  772 bits (1994), Expect = 0.0
 Identities = 535/1613 (33%), Positives = 803/1613 (49%), Gaps = 56/1613 (3%)
 Frame = +1

Query: 1471 IKNFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYMNPSLIYETLN 1650
            ++N   L+D   R L V +LDRFGDY+ D VVAPVRE+ AQ L A   +++ +L  +  N
Sbjct: 341  LRNSRSLEDLASRLLTVFALDRFGDYVYDTVVAPVRESVAQTLAALLIHLDSTLSIKIFN 400

Query: 1651 ILLQMQRRPE---------WEIRHGSLLGIKYLVAVRQEML--QDLLGYILPACKAGLED 1797
             L Q+  +           WE  HG LLGI+Y V+++   L    LL  ++     GL  
Sbjct: 401  CLEQLVLQDPLQTGLPNKIWEATHGGLLGIRYFVSIKTNFLFAHGLLENVVRIVLYGLNQ 460

Query: 1798 SXXXXXXXXXXXXXXXXXXIVSLRGQTLLSIVMXX-XXXXXXXXXXSPSTSSIMNLLAEI 1974
            S                   V L   T+  +V              S S  SIM+LLA++
Sbjct: 461  SDDDVQSVAASILTPITSEFVKLNNSTIEILVTTIWSLLARLDDDISSSVGSIMDLLAKL 520

Query: 1975 YSQDDMTLVMHEELSLGEEQNIELNEMGHIESIGERRDVKESPYALSGLAPRLWPFTRHD 2154
                      H+E+               ++ +  +     S ++   L P+L+PF RH 
Sbjct: 521  CD--------HQEV---------------LDILKNKALEHPSEWSFKSLVPKLYPFLRHS 557

Query: 2155 ITSVRFSAIRTLERLLEAGCRKNISGQSKSSFWPSSILGDTLRIVFQNLLLESTEEILEC 2334
            I+SVR + +  L   L      +I   S  ++    + G   R+VFQN+LLE   E+L+ 
Sbjct: 558  ISSVRRAVLNLLIAFL------SIKDDSTKNW----LNGKVFRLVFQNILLEQNPELLQL 607

Query: 2335 SERVW-RLLVQCPVDDLEDTAKFYMASWIE----LAATPYGSTLDATKMFWPVAPPRKSH 2499
            S  V+  LL    V   E T     +  ++    L  TP G       M          H
Sbjct: 608  SFDVYVALLEHYKVKHTEKTLDHVFSKHLQPILHLLNTPVGEKGKNYAMESQYILKPSQH 667

Query: 2500 FKAAAKMKAVKLENEASSILGFDYARSSASLEKQEDASARSTKIIVGSDMEMSVTRTRVV 2679
            ++   + K    E    S +         +++    A   +   ++G D+   +  TR++
Sbjct: 668  YQLHPEKKRSISETTTDSDIPIPKNNEHINIDAPMIAGDIT---LLGLDV---ILNTRIM 721

Query: 2680 TASALGIFASRLREGSMQ-FVVDPLSSTLTSMSGVQRQVGSIVLISWFRETKCKAPSDGS 2856
             A A  +  S  ++ ++Q F  + L   L       R +  I+ +S F  +  +   +G 
Sbjct: 722  GAKAFALTLSMFQDSTLQSFFTNVLVRCLELPFSTPRMLAGII-VSQFCSSWLQKHPEGE 780

Query: 2857 GSLPGFPSPLKKWLLDLLACADPAFPTKDIFLPYAELSRTYTKMRNEASQLLHTVETCHC 3036
              LP F S +   +++        FP       + EL  +   +R +   LL T      
Sbjct: 781  -KLPSFVSEIFSPVMNKQLLNRDEFPV------FRELVPSLKALRTQCQSLLATFVDVG- 832

Query: 3037 FDKLLSTNKL-NVESVTADETIDFASTLDLWNKESAGNESLEKQ-----------VFEDV 3180
               +L   KL NV  V   ET        +   E    E  +K              + +
Sbjct: 833  ---MLPQYKLPNVAIVVQGETEAGPHAFGVETAEKVYGEYYDKMFKSMNNSYKLLAKKPL 889

Query: 3181 ESSRQQLLSTAGYLKCVQSNLHITVTSLVAAAVVWMSEFPARLNPIILPLMASIKRXXXX 3360
            E S+ ++L      K        ++ +  A++++     P +LNPII  LM S+K     
Sbjct: 890  EDSKHRVLMAINSAKESAKLRTGSILANYASSILLFDGLPLKLNPIIRSLMDSVKEERNE 949

Query: 3361 XXXXXXXXXXXXXXXYCVDR-KPSPNDKLIKNICSLTCMDPSETPQAXXXXXXXXXXXXX 3537
                             ++  K + + K++KN+C   C+D SE P               
Sbjct: 950  KLQTMAGESVVHLIQQLLENNKVNVSGKIVKNLCGFLCVDTSEVPDFSVNAEYKEKILTL 1009

Query: 3538 FLSSRSNTGKQKAKVVLASGEDRSKVEGFITRRGSELALKHLSLKFGGSLFDKLPKLWEC 3717
               S S   +    +   S E + K      R+G  + LK L    G S+  KLP+L   
Sbjct: 1010 IKESNSIAAQDDINLAKMSEEAQLK------RKGGLITLKILFEVLGPSILQKLPQLRSI 1063

Query: 3718 LTEVLVPEIPSDQQKIDLKI--ESISDPQVVRSIAPVMEETLKP-RLLSLLPCIFKCVRH 3888
            L + L      +  K+D +   + +    V+R++ P M ++L+   + +  P +   +R 
Sbjct: 1064 LFDSLSDHENEEASKVDNEQGQKIVDSFGVLRALFPFMSDSLRSSEVFTRFPVLLTFLRS 1123

Query: 3889 SHVAVRLAASRCVMTMAKSMTTDVMAAVVESAIPMLGDLTCISGRQGAGMXXXXXXXXXX 4068
            +    R +A+R    +AK  + +VMA  +   +P++     +S RQG+            
Sbjct: 1124 NLSVFRYSAARTFADLAKISSVEVMAYTIREILPLMNSAGSLSDRQGSTELIYHLSLSME 1183

Query: 4069 XXXXXXXXXXXXXXXRCMSDVDSSVRQSVTRSFAALVPMLPLARGVPPPVGLSKDLSSNA 4248
                             MSD +  VR   T +FA+++ ++PL  G+  P GL ++L ++ 
Sbjct: 1184 TDVLPYVIFLIVPLLGRMSDSNEDVRNLATTTFASIIKLVPLEAGIADPKGLPEELVASR 1243

Query: 4249 E-DAKFLEQLLDNSHIDDYKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGK 4425
            E +  F++Q++D S    +KL   +K  LR+YQQ+G+NWL FL ++ LHGILCDDMGLGK
Sbjct: 1244 ERERDFIQQMMDPSKAKPFKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGK 1303

Query: 4426 TLQASAIVASDAAERRGSTD-----ELDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVL 4590
            TLQ   I+ASD   R+   +     E    PS+I+CP +L GHW  E ++Y     L V+
Sbjct: 1304 TLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPF--LKVV 1361

Query: 4591 QYVGSAQDRVSLREQFNNHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKIT 4770
             Y G    R++LR Q ++ ++I+TSYDV R D+  L +  +NYC+LDEGHIIKN++SK+ 
Sbjct: 1362 VYAGGPTVRLTLRPQLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLA 1421

Query: 4771 AAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKC 4950
             AVK++ A HRLIL+GTPIQNN++ELWSLFDFLMPGFLGTE+ FQ  + KP+ A+R+ K 
Sbjct: 1422 KAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKT 1481

Query: 4951 SAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSG 5130
            S+K+ EAGVLA+EALHKQV+PF+LRR KE+VLSDLP KIIQD YC+L  +Q +LY  F+ 
Sbjct: 1482 SSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFT- 1540

Query: 5131 SSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVA 5310
               K++ + + K     D  N+++A  K   H+FQALQY+ KLC+HP LVL      P  
Sbjct: 1541 ---KKQKNVVEK-----DIENSEIADGK--QHIFQALQYMRKLCNHPALVL-----SPNH 1585

Query: 5311 SDLAAMINGCSDIITELHKVQHSPKLVALQEILEECGIGSD----ASSSDGTLS----VG 5466
              LA + +       +LH + ++PKL AL+ +L ECGIG +     +S D        + 
Sbjct: 1586 PQLAQVQDYLKQTGLDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVIS 1645

Query: 5467 QHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVXX 5646
            QHR LIF Q K +LD++E DLF+ +M SVTYMRLDGS+ P  R ++V+ FN DP+ID   
Sbjct: 1646 QHRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLL 1705

Query: 5647 XXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQFANIELNKLWQAMDRAHRLGQKRVVNVH 5826
                          ADT++F+EHDWNPM D            QAMDRAHR+GQK+VVNV+
Sbjct: 1706 LTTKVGGLGLNLTGADTVIFVEHDWNPMND-----------LQAMDRAHRIGQKKVVNVY 1754

Query: 5827 RLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQLLDLF----ASAETXXXXX 5994
            R+I +GTLEEK+M LQKFK+++A+TV+N +N+ + +M+T QLLDLF     +++      
Sbjct: 1755 RIITKGTLEEKIMGLQKFKMNIASTVVNQQNSGLASMDTHQLLDLFDPDNVTSQDNEEKN 1814

Query: 5995 XXXXXXXEDNDQIAG----TGKGMKAILGNLEELWDQSQYTEEYNLSQFLTKL 6141
                   +  + IA     TGK  +A LG L+ELWD SQY EEYNL  F+  L
Sbjct: 1815 NGDSQAAKGMEDIANETGLTGKAKEA-LGELKELWDPSQYEEEYNLDTFIKTL 1866

 Score =  110 bits (276), Expect = 2e-22
 Identities = 103/397 (25%), Positives = 172/397 (42%), Gaps = 45/397 (11%)
 Frame = +1

Query: 19   SRLNRLLTLLDTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWDTRVAAA 198
            SRL+R + L++TGSTQ  R  AA Q+GD+AK HP+D+ SLL +V   L  KKW+TRV AA
Sbjct: 6    SRLDRQVILIETGSTQVVRNMAADQMGDLAKQHPEDILSLLSRVYPFLLVKKWETRVTAA 65

Query: 199  HAIGAIVLNVKHPSLSELLNSLATKLGEAGISDNVDEVV----------AFRNLQSKILA 348
             A+G IV +   PS     + L     E    DN    +          A +N Q  +L 
Sbjct: 66   RAVGGIVAHA--PSWDPNESDLVGGTNEGSPLDNAQVKLEHEMKIKLEEATQNNQLNLLQ 123

Query: 349  N----APFRSFEMNKVLEFG-ALLASGGQEYDILNDNSKNPRDRVARQKKNLRRRLGLDM 513
                 +    +++N++L+ G  LLAS   +Y++L     N                    
Sbjct: 124  EDHHLSSLSDWKLNEILKSGKVLLASSMNDYNVLGKADDN-------------------- 163

Query: 514  CEQFMDVNEMIRDEDLIEQKSNVPANGVGNRLYANCSPHHIQQFVSRMVPRVNSRRPSAR 693
                  + +  + +D+ ++ S + A+   N                    + N+ + SAR
Sbjct: 164  ------IRKQAKTDDIKQETSMLNASDKANE------------------NKSNANKKSAR 199

Query: 694  ELNLLKRKAKISSKDQAKGSCEVADVEMS--------------SSHVASTSKRI-----L 816
             L + +RK K+S+K+  K   ++ +  +S              S   + TS ++     +
Sbjct: 200  MLAMARRKKKMSAKNTPKHPVDITESSVSKTLLNGKNMTNSAASLATSPTSNQLNPKLEI 259

Query: 817  SDSLDSSKADIGNEDDIEPDGDGK-------WPFHSFVEQLILDMFDPAWEIRHGSVMAL 975
            ++  D SK  I  E  + P  +         W F    E L+ ++    WEIRHG+ + L
Sbjct: 260  TEQADESKLMI--ESTVRPLLEQHEIVAGLVWQFQGIYELLLDNLMSENWEIRHGAALGL 317

Query: 976  REILMLHGGSA----GVSTEEFSSDNGFELKDVLNKV 1074
            RE++  H        G + EE +  N   L+D+ +++
Sbjct: 318  RELVKKHAYGVSRVKGNTREENNLRNSRSLEDLASRL 354
  Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
    Posted date:  Feb 27, 2003  4:02 PM
  Number of letters in database: 431,508,457
  Number of sequences in database:  1,347,713
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 139
effective length of database: 244,176,350
effective search space used: 466376828500
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)







BLAST Search Results