BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At1g23650.f
         (87 letters)

Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr 
           1,347,713 sequences; 431,508,457 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173777.1|  unknown protein; protein id: At1g23650.1 [...    62   2e-09
gb|AAF79591.1|AC007945_11  F28C11.19 [Arabidopsis thaliana]        60   7e-09

>ref|NP_173777.1| unknown protein; protein id: At1g23650.1 [Arabidopsis thaliana]
          Length = 28

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +1

Query: 1  MRGEAFIDHSNSPLHPLKRNGKKERTRS 84
          MRGEAFIDHSNSPLHPLKRNGKKERTRS
Sbjct: 1  MRGEAFIDHSNSPLHPLKRNGKKERTRS 28



>gb|AAF79591.1|AC007945_11 F28C11.19 [Arabidopsis thaliana]
          Length = 3134

 Score = 60.5 bits (145), Expect = 7e-09
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +1

Query: 1   MRGEAFIDHSNSPLHPLKRNGKKERTR 81
           MRGEAFIDHSNSPLHPLKRNGKKERTR
Sbjct: 656 MRGEAFIDHSNSPLHPLKRNGKKERTR 682



  Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
    Posted date:  Feb 27, 2003  4:02 PM
  Number of letters in database: 431,508,457
  Number of sequences in database:  1,347,713
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 4
effective length of database: 426,117,605
effective search space used: 10226822520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)