BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At2g16830.f
         (81 letters)

Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr 
           1,347,713 sequences; 431,508,457 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||G84544  hypothetical protein At2g16830 [imported] - Ara...    62   3e-09
gb|AAC64216.1|  putative plasma membrane intrinsic protein [...    42   0.003
gb|AAM66021.1|  plasma membrane intrinsic protein SIMIP [Ara...    36   0.19 
gb|AAB36949.1|  plasma membrane intrinsic protein PIP3 [Arab...    36   0.19 
gb|AAB65787.1|  plasma membrane intrinsic protein [Arabidops...    36   0.19 

>pir||G84544 hypothetical protein At2g16830 [imported] - Arabidopsis
          thaliana|gi|4581126|gb|AAD24616.1| unknown protein
          [Arabidopsis thaliana]|gi|15227299|ref|NP_179274.1|
          unknown protein; protein id: At2g16830.1 [Arabidopsis
          thaliana]
          Length = 26

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +1

Query: 1  MMTPYKRLGGGANTVADGQHRNSSWC 78
          MMTPYKRLGGGANTVADGQHRNSSWC
Sbjct: 1  MMTPYKRLGGGANTVADGQHRNSSWC 26



>gb|AAC64216.1| putative plasma membrane intrinsic protein [Arabidopsis
           thaliana]|gi|15227302|ref|NP_179277.1| putative plasma
           membrane intrinsic protein; protein id: At2g16850.1,
           supported by cDNA: 36296. [Arabidopsis
           thaliana]|gi|25295699|pir||A84545 hypothetical protein
           At2g16850 [imported] - Arabidopsis
           thaliana|gi|20197465|gb|AAM15086.1| putative plasma
           membrane intrinsic protein [Arabidopsis thaliana]
          Length = 278

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 1   MMTPYKRLGGGANTVADG 54
           MMTPYKRLGGGANTVADG
Sbjct: 138 MMTPYKRLGGGANTVADG 155



>gb|AAM66021.1| plasma membrane intrinsic protein SIMIP [Arabidopsis
           thaliana]|gi|20148503|gb|AAM10142.1| plasma membrane
           intrinsic protein (SIMIP) [Arabidopsis
           thaliana]|gi|17065454|gb|AAL32881.1| plasma membrane
           intrinsic protein (SIMIP) [Arabidopsis
           thaliana]|gi|15724340|gb|AAL06563.1|AF412110_1
           AT4g35100/M4E13_150 [Arabidopsis
           thaliana]|gi|7270461|emb|CAB80227.1| plasma membrane
           intrinsic protein (SIMIP) [Arabidopsis
           thaliana]|gi|2924520|emb|CAA17774.1| plasma membrane
           intrinsic protein (SIMIP) [Arabidopsis
           thaliana]|gi|7441242|pir||T05780 plasma membrane
           intrinsic protein M4E13.150 - Arabidopsis
           thaliana|gi|15236267|ref|NP_195236.1| plasma membrane
           intrinsic protein (SIMIP); protein id: At4g35100.1,
           supported by cDNA: 7108., supported by cDNA:
           gi_15724339, supported by cDNA: gi_1688295, supported by
           cDNA: gi_17065453, supported by cDNA: gi_20148502,
           supported by cDNA: gi_2306916 [Arabidopsis thaliana]
          Length = 280

 Score = 35.8 bits (81), Expect = 0.19
 Identities = 15/24 (62%), Positives = 18/24 (74%)
 Frame = +1

Query: 1   MMTPYKRLGGGANTVADGQHRNSS 72
           M TPY  LGGGANTVADG  + ++
Sbjct: 140 MKTPYNTLGGGANTVADGYSKGTA 163



>gb|AAB36949.1| plasma membrane intrinsic protein PIP3 [Arabidopsis thaliana]
          Length = 280

 Score = 35.8 bits (81), Expect = 0.19
 Identities = 15/24 (62%), Positives = 18/24 (74%)
 Frame = +1

Query: 1   MMTPYKRLGGGANTVADGQHRNSS 72
           M TPY  LGGGANTVADG  + ++
Sbjct: 140 MKTPYNTLGGGANTVADGYSKGTA 163



>gb|AAB65787.1| plasma membrane intrinsic protein [Arabidopsis thaliana]
          Length = 280

 Score = 35.8 bits (81), Expect = 0.19
 Identities = 15/24 (62%), Positives = 18/24 (74%)
 Frame = +1

Query: 1   MMTPYKRLGGGANTVADGQHRNSS 72
           M TPY  LGGGANTVADG  + ++
Sbjct: 140 MKTPYNTLGGGANTVADGYSKGTA 163



  Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
    Posted date:  Feb 27, 2003  4:02 PM
  Number of letters in database: 431,508,457
  Number of sequences in database:  1,347,713
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 2
effective length of database: 428,813,031
effective search space used: 10291512744
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)