BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01330.f
(2148 letters)
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
1,347,713 sequences; 431,508,457 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171640.1| hypothetical protein; protein id: At1g0133... 1214 0.0
gb|AAF97330.1|AC023628_11 Unknown protein [Arabidopsis thal... 663 0.0
ref|NP_172981.1| unknown protein; protein id: At1g15290.1 [... 412 e-116
pir||T02909 hypothetical protein T13J8.190 - Arabidopsis th... 403 e-114
pir||B86287 F9L1.23 protein - Arabidopsis thaliana|gi|51038... 390 e-109
>ref|NP_171640.1| hypothetical protein; protein id: At1g01330.1 [Arabidopsis thaliana]
Length = 715
Score = 1214 bits (3142), Expect = 0.0
Identities = 624/695 (89%), Positives = 624/695 (89%)
Frame = +1
Query: 61 VLPVIVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFDTCHVTNYSLSHEIRGSRLKD 240
VLPVIVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFDTCHVTNYSLSHEIRGSRLKD
Sbjct: 21 VLPVIVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFDTCHVTNYSLSHEIRGSRLKD 80
Query: 241 TVDVSALKPCVLTLTEEDYNEGTAVAHVRRLLDIVACTTCFGPSPEKSDSVKSAQVKGGG 420
TVDVSALKPCVLTLTEEDYNEGTAVAHVRRLLDIVACTTCFGPSPEKSDSVKSAQVKGGG
Sbjct: 81 TVDVSALKPCVLTLTEEDYNEGTAVAHVRRLLDIVACTTCFGPSPEKSDSVKSAQVKGGG 140
Query: 421 KNSKQSDTSPPPSPASKDTVVDEAGETSHSFPKLGSFYEFFSLAHLTPPLQYIRLATKRE 600
KNSKQSDTSPPPSPASKDTVVDEAGETSHSFPKLGSFYEFFSLAHLTPPLQYIRLATKRE
Sbjct: 141 KNSKQSDTSPPPSPASKDTVVDEAGETSHSFPKLGSFYEFFSLAHLTPPLQYIRLATKRE 200
Query: 601 TEDIAKEDHLLSIDVKLCNGKLVHIEGCRKGFYSIGKQRIICHNLVDLLRQISRAFDNAY 780
TEDIAKEDHLLSIDVKLCNGKLVHIEGCRKGFYSIGKQRIICHNLVDLLRQISRAFDNAY
Sbjct: 201 TEDIAKEDHLLSIDVKLCNGKLVHIEGCRKGFYSIGKQRIICHNLVDLLRQISRAFDNAY 260
Query: 781 SDLLKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERWXXXXXXXXXXXS 960
SDLLKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERW S
Sbjct: 261 SDLLKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERWGGDGGGQGRDGS 320
Query: 961 YDLVPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVMAEPVLA 1140
YDLVPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVMAEPVLA
Sbjct: 321 YDLVPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVMAEPVLA 380
Query: 1141 EEDSEVLYSEXXXXXXXXXXXXXSNASSKVDTKIDGIQATGLDKKKLMERNLLKGLTADE 1320
EEDSEVLYSE SNASSKVDTKIDGIQATGLDKKKLMERNLLKGLTADE
Sbjct: 381 EEDSEVLYSETVRDLTVTVTRDTSNASSKVDTKIDGIQATGLDKKKLMERNLLKGLTADE 440
Query: 1321 NTAAHDVATLGTISLKYCGYIAXXXXXXXXXXXXXXSQIVDLLEQPEGGANALNINSLRF 1500
NTAAHDVATLGTISLKYCGYIA SQIVDLLEQPEGGANALNINSLRF
Sbjct: 441 NTAAHDVATLGTISLKYCGYIAVVKLEKESEELSPPSQIVDLLEQPEGGANALNINSLRF 500
Query: 1501 LLHKSSPEQNKKTPQQHDDELTSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACWIQ 1680
LLHKSSPEQNKKTPQQHDDELTSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACWIQ
Sbjct: 501 LLHKSSPEQNKKTPQQHDDELTSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACWIQ 560
Query: 1681 HLQDQKNTEKDKKQTGEKSKNELKVEGXXXXXXXXXXXXXXTDVSSPKTPQTALSSQVDA 1860
HLQDQKNTEKDKKQTGEKSKNELKVEG TDVSSPKTPQTALSSQVDA
Sbjct: 561 HLQDQKNTEKDKKQTGEKSKNELKVEGLGKPLKSLNSSKKKTDVSSPKTPQTALSSQVDA 620
Query: 1861 VSSEADTAASLQSDAEKNAQENVLILKNLLSDAAFTRLKESDTGLHHKXXXXXXXXXXXX 2040
VSSEADTAASLQSDAEKNAQENVLILKNLLSDAAFTRLKESDTGLHHK
Sbjct: 621 VSSEADTAASLQSDAEKNAQENVLILKNLLSDAAFTRLKESDTGLHHKVLHYNFNLLLYV 680
Query: 2041 XXXXXXXTKNICSSLCKNLSTWHRIIILKLLFRNW 2145
TKNICSSLCKNLSTWHRIIILKLLFRNW
Sbjct: 681 YLLNCVLTKNICSSLCKNLSTWHRIIILKLLFRNW 715
>gb|AAF97330.1|AC023628_11 Unknown protein [Arabidopsis thaliana]|gi|25513581|pir||E86143
F6F3.12 protein - Arabidopsis thaliana
Length = 1483
Score = 663 bits (1711), Expect = 0.0
Identities = 344/397 (86%), Positives = 345/397 (86%)
Frame = +1
Query: 814 KFGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERWXXXXXXXXXXXSYDLVPWSNEFA 993
+FGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERW SYDLVPWSNEFA
Sbjct: 15 QFGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERWGGDGGGQGRDGSYDLVPWSNEFA 74
Query: 994 FIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVMAEPVLAEEDSEVLYSEX 1173
FIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVMAEPVLAEEDSEVLYSE
Sbjct: 75 FIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVMAEPVLAEEDSEVLYSET 134
Query: 1174 XXXXXXXXXXXXSNASSKVDTKIDGIQATGLDKKKLMERNLLKGLTADENTAAHDVATLG 1353
SNASSKVDTKIDGIQATGLDKKKLMERNLLKGLTADENTAAHDVATLG
Sbjct: 135 VRDLTVTVTRDTSNASSKVDTKIDGIQATGLDKKKLMERNLLKGLTADENTAAHDVATLG 194
Query: 1354 TISLKYCGYIAXXXXXXXXXXXXXXSQIVDLLEQPEGGANALNINSLRFLLHKSSPEQNK 1533
TISLKYCGYIA SQIVDLLEQPEGGANALNINSLRFLLHKSSPEQNK
Sbjct: 195 TISLKYCGYIAVVKLEKESEELSPPSQIVDLLEQPEGGANALNINSLRFLLHKSSPEQNK 254
Query: 1534 KTPQQHDDELTSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACWIQHLQDQKNTEKD 1713
KTPQQHDDELTSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACWIQHLQDQKNTEKD
Sbjct: 255 KTPQQHDDELTSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACWIQHLQDQKNTEKD 314
Query: 1714 KKQTGEKSKNELKVEGXXXXXXXXXXXXXXTDVSSPKTPQTALSSQVDAVSSEADTAASL 1893
KKQTGEKSKNELKVEG TDVSSPKTPQTALSSQVDAVSSEADTAASL
Sbjct: 315 KKQTGEKSKNELKVEGLGKPLKSLNSSKKKTDVSSPKTPQTALSSQVDAVSSEADTAASL 374
Query: 1894 QSDAEKNAQENVLILKNLLSDAAFTRLKESDTGLHHK 2004
QSDAEKNAQENVLILKNLLSDAAFTRLKESDTGLHHK
Sbjct: 375 QSDAEKNAQENVLILKNLLSDAAFTRLKESDTGLHHK 411
>ref|NP_172981.1| unknown protein; protein id: At1g15290.1 [Arabidopsis thaliana]
Length = 1558
Score = 412 bits (1060), Expect(2) = e-116
Identities = 251/673 (37%), Positives = 370/673 (54%), Gaps = 27/673 (4%)
Frame = +1
Query: 67 PVIVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFDTCHVTNYSLSHEIRGSRLKDTV 246
P +V++ V P ET+ ILKG+STD+IIDVRRLL+ + +TCH TNYSLSH+++G +L D +
Sbjct: 29 PSLVEITVTTPYETQVILKGVSTDKIIDVRRLLASHVETCHFTNYSLSHKVKGHKLNDNI 88
Query: 247 DVSALKPCVLTLTEEDY-NEGTAVAHVRRLLDIVACTT-CFGPSPEKSDSVKSAQVKGGG 420
V +LKPC L + E+Y E A+ VRR++DIVACTT F SP KS + G
Sbjct: 89 QVLSLKPCFLRMIPEEYLEESQALTQVRRVIDIVACTTRFFSKSPNKS-------IVAGN 141
Query: 421 KNSKQSDTSPPPSPASKDTVVDEAGETSHSFPKLGSFYEFFSLAHLTPPLQYIRLATKRE 600
N P P+P D V H+ PKL FYEFFS+ HL+PP+ +++ E
Sbjct: 142 AN-------PTPAPDGLDMV------AIHTTPKLSQFYEFFSIHHLSPPILHLKKVDGEE 188
Query: 601 TEDIAKEDHLLSIDVKLCNGKLVHIEGCRKGFYSIGKQRIICHNLVDLLRQISRAFDNAY 780
+ D+ + VK+CNGK++H+ KGF+++GKQ CH++VDLL+ +S AF AY
Sbjct: 189 AGEKRDGDY-FGLKVKICNGKVIHVIASVKGFFAVGKQLSHCHSIVDLLQNVSNAFAKAY 247
Query: 781 SDLLKAFSERNK---FGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERWXXXXXXXXX 951
L+KAF++RNK FGNLP+G R+NTWL+P ++S + PLP EDE W
Sbjct: 248 ESLMKAFTDRNKVADFGNLPFGLRSNTWLVPSPVSESAS---PLPTEDEHWGGNGGGQGR 304
Query: 952 XXSYDLVPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVMAEP 1131
YD PW+ EF+ +A++PCKT EER +RD+K FLLH+ F+D + RA++A+ VM
Sbjct: 305 NGEYDHRPWAAEFSVLATLPCKTEEERVIRDKKAFLLHSQFIDTSVQRAVRAICNVMDTN 364
Query: 1132 VLAEEDSE-----VLYSEXXXXXXXXXXXXXSNASSKVDTKIDGIQATGLDKKKLMERNL 1296
++ +L + ++ SK + A L ++L ERNL
Sbjct: 365 QQTSGTTDLPAGSILLEDHVGDLSIVVKRDIASLDSKPEATFQN-DAFVLSSEELAERNL 423
Query: 1297 LKGLTADENTAAH----------DVATLGTISLKYCGYIAXXXXXXXXXXXXXXSQIVDL 1446
LKG+TADE+ H D LG + ++ CGY A + + +
Sbjct: 424 LKGITADESVIVHTITSEEKNIQDTPALGKVIVRQCGYTAVVNVKGQTQKAMSDFRDILI 483
Query: 1447 LEQPEGGANALNINSLRFLLHK--SSPEQNKKTPQQHD-DELTSSREFVSKMLEESIAKL 1617
+ P+GGANALN+NSLR H+ S + P Q D D+L S R + ++++ ++ KL
Sbjct: 484 DDLPDGGANALNLNSLRVEFHRPHSVGTSVENQPTQLDWDDLESYRCIIQELVKINLTKL 543
Query: 1618 EGEEIDRDSIMRWELGACWIQHLQDQKNTEKDKKQTGEKSKNELKVEGXXXXXXXXXXXX 1797
E + +RWELG+ W+QHLQ ++ K T +++ EL V+G
Sbjct: 544 EETRVSSVRPIRWELGSTWVQHLQKKETDVCGKPATNDET--ELSVKG---------LGK 592
Query: 1798 XXTDVSSPKTPQTALSSQVDAVSSEADTAASLQSDAEKNAQENV----LILKNLLSDAAF 1965
D+ S ++ S + AV +E DT ++ + Q+++ LK LLS+ AF
Sbjct: 593 QFKDLKS----KSKKSENISAV-NEKDTRLHELNEEDDLGQKSIDGLFTELKELLSEEAF 647
Query: 1966 TRLKESDTGLHHK 2004
+RLKE+ TGLH K
Sbjct: 648 SRLKETGTGLHLK 660
Score = 30.8 bits (68), Expect(2) = e-116
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 2076 LQSLQELVDLAQNYYTEVAIPKLV 2147
L+S +EL ++A YY E+A+P+LV
Sbjct: 659 LKSKEELTNMAYGYYDEIALPRLV 682
>pir||T02909 hypothetical protein T13J8.190 - Arabidopsis
thaliana|gi|7269662|emb|CAB79610.1| putative protein
[Arabidopsis thaliana]|gi|4455367|emb|CAB36777.1|
putative protein [Arabidopsis
thaliana]|gi|15234379|ref|NP_194537.1| putative protein;
protein id: At4g28080.1 [Arabidopsis thaliana]
Length = 1791
Score = 403 bits (1036), Expect(2) = e-114
Identities = 244/631 (38%), Positives = 340/631 (53%), Gaps = 59/631 (9%)
Frame = +1
Query: 289 EDYNEGTAVAHVRRLLDIVACTTCFGPS--------PEKSDSVKSAQVKGGGKNSKQ--- 435
EDY E A AH+RRLLDIVACTT FGPS P+ S+ +S G K
Sbjct: 31 EDYTEEQATAHIRRLLDIVACTTAFGPSKPPVSRTLPKDSEKKESGSTDGDSPTEKDAGD 90
Query: 436 --SDTSPPPSPASKDTVVDEAGETSHSFPK----------LGSFYEFFSLAHLTPPLQ-- 573
S SP P + K +V +++ K LG FYEFFS ++LTPP+Q
Sbjct: 91 SNSGLSPKPKESEKKSVGACEAQSAEGAAKSDIDMCPPTRLGQFYEFFSFSYLTPPIQCE 150
Query: 574 --------YIRLATKRETEDIAKEDHLLSIDVKLCNGKLVHIEGCRKGFYSIGKQRIICH 729
+RL +++ I +K+ +GK + R GFY GKQ+++CH
Sbjct: 151 FPYSLVNRILRLILLIDSDKIIFRHQ----KIKVSSGKPFTVVASRTGFYPPGKQQLLCH 206
Query: 730 NLVDLLRQISRAFDNAYSDLLKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPPLPV 909
+LV+LL+QISR FD AY L+KAF E NKFGNLPYGFRANTW++PP A SP+ FP LPV
Sbjct: 207 SLVELLQQISRPFDAAYDALMKAFIEHNKFGNLPYGFRANTWVVPPVVADSPSTFPSLPV 266
Query: 910 EDERWXXXXXXXXXXXSYDLVPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVDVAT 1089
EDE W YD W+ EFA +A+MPCKT EERQVRDRK FLLH+LFVDV+
Sbjct: 267 EDETWGGDGGGVGRSGKYDKRKWAKEFAILAAMPCKTPEERQVRDRKAFLLHSLFVDVSV 326
Query: 1090 FRAIKAVQKVMAEPVLAEEDSEVL--YSEXXXXXXXXXXXXXSNASSKVDTKIDGIQATG 1263
F+A++ ++K++ + +D L + E +AS+K+D K DG Q
Sbjct: 327 FKAVEIIKKIVENNQCSLKDPAALGFHEERIGDLIVRVARDDPDASAKLDRKSDGTQVLE 386
Query: 1264 LDKKKLMERNLLKGLTADENTAAHDV----------ATLGTISLKYCGYIAXXXXXXXXX 1413
+ +++L +RNLLKG+TADE+ H + A G ++ Y +I
Sbjct: 387 ISQEELAQRNLLKGITADESATVHVILLASAAFLSFALTGIVTEIYLDHIGYVYFGGGGS 446
Query: 1414 XXXXXS----------QIVDLLEQPEGGANALNINSLRFLLHKSSPEQN--KKTPQQHDD 1557
S Q +D+ +Q EGGANALN+NSLR LLHKSS + +++P +
Sbjct: 447 IVKVASEFKLNDGHILQDIDIEDQSEGGANALNVNSLRTLLHKSSTPSSLAQRSPNADSE 506
Query: 1558 ELTSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACWIQHLQDQKNTEKDKKQTGEKS 1737
++ ++ V K++E+S+ KLE E +RWELGACW+QHLQ+Q +++ + K+T E
Sbjct: 507 QIRVAKSLVRKVIEDSLKKLEIEPSRYSKPIRWELGACWVQHLQNQASSKSESKKT-EDP 565
Query: 1738 KNELKVEGXXXXXXXXXXXXXXTDVSSPKTPQ--TALSSQVDAVSSEADTAASLQSDAEK 1911
K E V+G DV + KT Q A ++ D S D Q + EK
Sbjct: 566 KPEPAVKGLGKQGALLKEIKRKIDVKANKTEQGKEAPANDTDNTSETED-----QKELEK 620
Query: 1912 NAQENVLILKNLLSDAAFTRLKESDTGLHHK 2004
+E + K L+++ A+ RLKES+TG H K
Sbjct: 621 QNEEIEKMWKELVTETAYQRLKESETGFHLK 651
Score = 32.0 bits (71), Expect(2) = e-114
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +3
Query: 2076 LQSLQELVDLAQNYYTEVAIPKL 2144
L+S +EL+++A+ YYT+ A+PKL
Sbjct: 650 LKSPKELIEMARKYYTDTALPKL 672
>pir||B86287 F9L1.23 protein - Arabidopsis
thaliana|gi|5103827|gb|AAD39657.1|AC007591_22 ESTs
gb|F20110 and gb|F20109 come from this gene. [Arabidopsis
thaliana]
Length = 1604
Score = 390 bits (1003), Expect(2) = e-109
Identities = 243/670 (36%), Positives = 359/670 (53%), Gaps = 24/670 (3%)
Frame = +1
Query: 67 PVIVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFDTCHVTNYSLSHEIRGSRLKDTV 246
P +V++ V P ET+ ILKG+STD+IIDVRRLL+ + +TCH TNYSLSH+++G +L D +
Sbjct: 29 PSLVEITVTTPYETQVILKGVSTDKIIDVRRLLASHVETCHFTNYSLSHKVKGHKLNDNI 88
Query: 247 DVSALKPCVLTLTEEDY-NEGTAVAHVRRLLDIVACTT-CFGPSPEKSDSVKSAQVKGGG 420
V +LKPC L + E+Y E A+ VRR++DIVACTT F SP KS + G
Sbjct: 89 QVLSLKPCFLRMIPEEYLEESQALTQVRRVIDIVACTTRFFSKSPNKS-------IVAGN 141
Query: 421 KNSKQSDTSPPPSPASKDTVVDEAGETSHSFPKLGSFYEFFSLAHLTPPLQYIRLATKRE 600
N P P+P D V H+ PKL FYEFFS+ HL+PP+ +++ E
Sbjct: 142 AN-------PTPAPDGLDMV------AIHTTPKLSQFYEFFSIHHLSPPILHLKKVDGEE 188
Query: 601 TEDIAKEDHLLSIDVKLCNGKLVHIEGCRKGFYSIGKQRIICHNLVDLLRQISRAFDNAY 780
+ D+ + VK+CNGK++H+ KGF+++GKQ CH++VDLL+ +S AF
Sbjct: 189 AGEKRDGDY-FGLKVKICNGKVIHVIASVKGFFAVGKQLSHCHSIVDLLQNVSNAF---- 243
Query: 781 SDLLKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERWXXXXXXXXXXXS 960
KFGNLP+G R+NTWL+P ++S + PLP EDE W
Sbjct: 244 ----------AKFGNLPFGLRSNTWLVPSPVSESAS---PLPTEDEHWGGNGGGQGRNGE 290
Query: 961 YDLVPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVMAEPVLA 1140
YD PW+ EF+ +A++PCKT EER +RD+K FLLH+ F+D + RA++A+ VM
Sbjct: 291 YDHRPWAAEFSVLATLPCKTEEERVIRDKKAFLLHSQFIDTSVQRAVRAICNVMDTNQQT 350
Query: 1141 EEDSE-----VLYSEXXXXXXXXXXXXXSNASSKVDTKIDGIQATGLDKKKLMERNLLKG 1305
++ +L + ++ SK + A L ++L ERNLLKG
Sbjct: 351 SGTTDLPAGSILLEDHVGDLSIVVKRDIASLDSKPEATFQN-DAFVLSSEELAERNLLKG 409
Query: 1306 LTADENTAAH----------DVATLGTISLKYCGYIAXXXXXXXXXXXXXXSQIVDLLEQ 1455
+TADE+ H D LG + ++ CGY A + + + +
Sbjct: 410 ITADESVIVHTITSEEKNIQDTPALGKVIVRQCGYTAVVNVKGQTQKAMSDFRDILIDDL 469
Query: 1456 PEGGANALNINSLRFLLHK--SSPEQNKKTPQQHD-DELTSSREFVSKMLEESIAKLEGE 1626
P+GGANALN+NSLR H+ S + P Q D D+L S R + ++++ ++ KLE
Sbjct: 470 PDGGANALNLNSLRVEFHRPHSVGTSVENQPTQLDWDDLESYRCIIQELVKINLTKLEET 529
Query: 1627 EIDRDSIMRWELGACWIQHLQDQKNTEKDKKQTGEKSKNELKVEGXXXXXXXXXXXXXXT 1806
+ +RWELG+ W+QHLQ ++ K T +++ EL V+G
Sbjct: 530 RVSSVRPIRWELGSTWVQHLQKKETDVCGKPATNDET--ELSVKG---------LGKQFK 578
Query: 1807 DVSSPKTPQTALSSQVDAVSSEADTAASLQSDAEKNAQENV----LILKNLLSDAAFTRL 1974
D+ S ++ S + AV +E DT ++ + Q+++ LK LLS+ AF+RL
Sbjct: 579 DLKS----KSKKSENISAV-NEKDTRLHELNEEDDLGQKSIDGLFTELKELLSEEAFSRL 633
Query: 1975 KESDTGLHHK 2004
KE+ TGLH K
Sbjct: 634 KETGTGLHLK 643
Score = 30.8 bits (68), Expect(2) = e-109
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 2076 LQSLQELVDLAQNYYTEVAIPKLV 2147
L+S +EL ++A YY E+A+P+LV
Sbjct: 642 LKSKEELTNMAYGYYDEIALPRLV 665
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
Posted date: Feb 27, 2003 4:02 PM
Number of letters in database: 431,508,457
Number of sequences in database: 1,347,713
Lambda K H
0.316 0.132 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 130
effective length of database: 256,305,767
effective search space used: 149938873695
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)