BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01740.f
(1452 letters)
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
1,347,713 sequences; 431,508,457 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171679.1| protein kinase, putative; protein id: At1g... 965 0.0
gb|AAF78407.1|AC009273_13 Contains similarity to a protein ... 886 0.0
gb|AAM13274.1| unknown protein [Arabidopsis thaliana]|gi|17... 747 0.0
gb|AAC13615.1| F6N23.9 gene product [Arabidopsis thaliana]|... 694 0.0
dbj|BAB11102.1| protein kinase-like [Arabidopsis thaliana]|... 622 e-177
>ref|NP_171679.1| protein kinase, putative; protein id: At1g01740.1 [Arabidopsis
thaliana]
Length = 483
Score = 965 bits (2495), Expect = 0.0
Identities = 483/483 (100%), Positives = 483/483 (100%)
Frame = +1
Query: 1 MGGQSSKIGTCCSHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALENVVS 180
MGGQSSKIGTCCSHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALENVVS
Sbjct: 1 MGGQSSKIGTCCSHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALENVVS 60
Query: 181 EHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGYCC 360
EHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGYCC
Sbjct: 61 EHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGYCC 120
Query: 361 EGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYHDLN 540
EGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYHDLN
Sbjct: 121 EGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYHDLN 180
Query: 541 AYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGTLLL 720
AYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGTLLL
Sbjct: 181 AYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGTLLL 240
Query: 721 DLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARERPNI 900
DLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARERPNI
Sbjct: 241 DLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARERPNI 300
Query: 901 KSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILEKIGYKD 1080
KSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILEKIGYKD
Sbjct: 301 KSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILEKIGYKD 360
Query: 1081 DEDLSFMWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLGMISATVLVRRSQSYL 1260
DEDLSFMWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLGMISATVLVRRSQSYL
Sbjct: 361 DEDLSFMWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLGMISATVLVRRSQSYL 420
Query: 1261 MSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSILEARKISAS 1440
MSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSILEARKISAS
Sbjct: 421 MSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSILEARKISAS 480
Query: 1441 TQN 1449
TQN
Sbjct: 481 TQN 483
>gb|AAF78407.1|AC009273_13 Contains similarity to a protein kinase-like protein from Arabidopsis
thaliana gb|AL132960. It contains eukaryotic protein
kinase domain PF|00069|gi|25518738|pir||H86148
hypothetical protein T1N6.15 - Arabidopsis thaliana
Length = 499
Score = 886 bits (2289), Expect = 0.0
Identities = 461/513 (89%), Positives = 461/513 (89%), Gaps = 30/513 (5%)
Frame = +1
Query: 1 MGGQSSKIGTCCSHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALENVVS 180
MGGQSSKIGTCCSHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALENVVS
Sbjct: 1 MGGQSSKIGTCCSHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALENVVS 60
Query: 181 EHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGYCC 360
EHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGYCC
Sbjct: 61 EHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGYCC 120
Query: 361 EGGERLLVAEFMPNETLAKHLFHW------------------------------DTEPMK 450
EGGERLLVAEFMPNETLAKHLFH DTEPMK
Sbjct: 121 EGGERLLVAEFMPNETLAKHLFHCKKKMPLINCLSIFFQDFLLRFAYHFYHLPGDTEPMK 180
Query: 451 WAMRLRVALYISEALEYCSNNGHTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYS 630
WAMRLRVALYISEALEYCSNNGHTLYHDLNAYRVLFDE NSRDGKSYS
Sbjct: 181 WAMRLRVALYISEALEYCSNNGHTLYHDLNAYRVLFDE-------------NSRDGKSYS 227
Query: 631 TNLAFTPPEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCL 810
TNLAFTPPEYLRTG I SFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCL
Sbjct: 228 TNLAFTPPEYLRTGEIDLHPP-RSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCL 286
Query: 811 EGQFSDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSGTF 990
EGQFSDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSGTF
Sbjct: 287 EGQFSDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSGTF 346
Query: 991 ASPPSPFAEACSGKDLTSMVEILEKIGYKDDEDLSFMWTEQMQEAINSKKKGDIAFRRKD 1170
ASPPSPFAEACSGKDLTSMVEILEKIGYKDDEDLSFMWTEQMQEAINSKKKGDIAFRRKD
Sbjct: 347 ASPPSPFAEACSGKDLTSMVEILEKIGYKDDEDLSFMWTEQMQEAINSKKKGDIAFRRKD 406
Query: 1171 FSEAIEFYTQFLDLGMISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQS 1350
FSEAIEFYTQFLDLGMISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQS
Sbjct: 407 FSEAIEFYTQFLDLGMISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQS 466
Query: 1351 AALSVLGMEKESQIALTEGSILEARKISASTQN 1449
AALSVLGMEKESQIALTEGSILEARKISASTQN
Sbjct: 467 AALSVLGMEKESQIALTEGSILEARKISASTQN 499
>gb|AAM13274.1| unknown protein [Arabidopsis thaliana]|gi|17064838|gb|AAL32573.1|
Unknown protein [Arabidopsis
thaliana]|gi|22328189|ref|NP_191980.2| hypothetical
protein; protein id: At4g00710.1, supported by cDNA:
gi_17064837, supported by cDNA: gi_20259853 [Arabidopsis
thaliana]
Length = 489
Score = 747 bits (1928), Expect = 0.0
Identities = 379/482 (78%), Positives = 420/482 (86%), Gaps = 7/482 (1%)
Frame = +1
Query: 1 MGGQSSKIGTC--CSHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALENV 174
MGGQ S + C SHKT LEAPDV+N E+ E+ V +FREY+LEQLK ATS FA+E +
Sbjct: 1 MGGQCSSLSCCRNTSHKTAVLEAPDVDNGESSEITDVPNFREYTLEQLKAATSGFAVEYI 60
Query: 175 VSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGY 354
VSEHGE APNVVY+GKLEN KIA+KRF+ AWPD RQFLEEAR VGQLRS+RMANLLG
Sbjct: 61 VSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMANLLGC 120
Query: 355 CCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYHD 534
CCEG ERLLVAEFMPNETLAKHLFHW+T+PMKW MRLRV LY+++ALEYC++ G TLYHD
Sbjct: 121 CCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYHD 180
Query: 535 LNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGTL 714
LNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRIT ESVIYSFGTL
Sbjct: 181 LNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGTL 240
Query: 715 LLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARERP 894
LLDLL+GKHIPPSHALDLIRDRNLQTLTDSCL+GQFSDSDGTELVRL S CLQYEARERP
Sbjct: 241 LLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARERP 300
Query: 895 NIKSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILEKIGY 1074
N KSLVTAL LQK+TEVLSHVLMGLP SG+ SP SP EACS +DLT+M+EILEK+GY
Sbjct: 301 NTKSLVTALTPLQKETEVLSHVLMGLPHSGS-VSPLSPLGEACSRRDLTAMLEILEKLGY 359
Query: 1075 KDDE----DLSF-MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLGMISATVLV 1239
KDDE +LSF MWT+QMQE++NSKKKGD+AFR+KDF EAIE YTQF+D GMIS TV
Sbjct: 360 KDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGGMISPTVCA 419
Query: 1240 RRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSILE 1419
RRS YLMS+M KEALDDA++AQ ISPVW+VA YLQSA+L +LGMEKESQIAL EGS LE
Sbjct: 420 RRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEGSNLE 479
Query: 1420 AR 1425
A+
Sbjct: 480 AK 481
>gb|AAC13615.1| F6N23.9 gene product [Arabidopsis
thaliana]|gi|7267410|emb|CAB80880.1| hypothetical protein
[Arabidopsis thaliana]|gi|7486564|pir||T01235
hypothetical protein F6N23.9 - Arabidopsis thaliana
Length = 492
Score = 694 bits (1790), Expect = 0.0
Identities = 362/490 (73%), Positives = 403/490 (81%), Gaps = 15/490 (3%)
Frame = +1
Query: 1 MGGQSSKIGTC--CSHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALENV 174
MGGQ S + C SHKT LEAPDV+N E+ E+ V +FREY+LEQLK ATS FA+E +
Sbjct: 12 MGGQCSSLSCCRNTSHKTAVLEAPDVDNGESSEITDVPNFREYTLEQLKAATSGFAVEYI 71
Query: 175 VSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGY 354
VSEHGE APNVVY+GKLEN KIA+KRF+ AWPD RQFLEEAR VGQLRS+RMANLLG
Sbjct: 72 VSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMANLLGC 131
Query: 355 CCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYHD 534
CCEG ERLLVAEFMPNETLAKHLFHW+T+PMKW MRLRV LY+++ALEYC++ G TLYHD
Sbjct: 132 CCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYHD 191
Query: 535 LNAYRVLFDE--------ECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAES 690
LNAYRVLFDE ECNPRLSTFGLMKNSRDGK RIT ES
Sbjct: 192 LNAYRVLFDEVFIRAFNKECNPRLSTFGLMKNSRDGKR----------------RITPES 235
Query: 691 VIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCL 870
VIYSFGTLLLDLL+GKHIPPSHALDLIRDRNLQTLTDSCL+GQFSDSDGTELVRL S CL
Sbjct: 236 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCL 295
Query: 871 QYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMV 1050
QYEARERPN KSLVTAL LQK+TEVLSHVLMGLP SG+ SP SP EACS +DLT+M+
Sbjct: 296 QYEARERPNTKSLVTALTPLQKETEVLSHVLMGLPHSGS-VSPLSPLGEACSRRDLTAML 354
Query: 1051 EILEKIGYKDDE----DLSF-MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLG 1215
EILEK+GYKDDE +LSF MWT+QMQE++NSKKKGD+AFR+KDF EAIE YTQF+D G
Sbjct: 355 EILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG 414
Query: 1216 MISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIA 1395
MIS TV RRS YLMS+M KEALDDA++AQ ISPVW+VA YLQSA+L +LGMEKESQIA
Sbjct: 415 MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIA 474
Query: 1396 LTEGSILEAR 1425
L EGS LEA+
Sbjct: 475 LKEGSNLEAK 484
>dbj|BAB11102.1| protein kinase-like [Arabidopsis
thaliana]|gi|15237604|ref|NP_198942.1| protein
kinase-like; protein id: At5g41260.1 [Arabidopsis
thaliana]
Length = 487
Score = 622 bits (1605), Expect = e-177
Identities = 316/485 (65%), Positives = 386/485 (79%), Gaps = 9/485 (1%)
Frame = +1
Query: 1 MGGQSSKIGTCCSHKTTALEAPDV---ENKENGEVNGVHSFREYSLEQLKIATSCFALEN 171
MG + SK+ C + PDV + + GE N + FRE+S+E ++ ATS FA EN
Sbjct: 1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60
Query: 172 VVSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLG 351
+VSEHGE APNVVY+GKLEN +IA+KRF+ +WPD RQFLEEA+ VGQLR+ RMANLLG
Sbjct: 61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120
Query: 352 YCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYH 531
C E ERLL+AEFMPNETLAKHLFHW+++PMKWAMRLRVAL+I++ALEYC++ G LYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180
Query: 532 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGT 711
DLNAYRVLFD++ NPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGR+T ESVIYSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 712 LLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARER 891
LLLDLL+GKHIPPSHALDLIRDRN+Q L DS LEGQFS DGTEL+RL S CLQYE RER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 892 PNIKSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILEKIG 1071
PN KSLV+A+I LQKD E+ SH L+G+P S T + SP EAC DLT++ EI+EK+G
Sbjct: 301 PNPKSLVSAMIPLQKDLEIASHQLLGVPNSAT-TTALSPLGEACLRSDLTAIHEIIEKLG 359
Query: 1072 YKDDE----DLSF-MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLG-MISATV 1233
YKDDE +LSF MWT+QMQ+ + KKKGD AFR KDF++AIE Y+QF+++G M S TV
Sbjct: 360 YKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTV 419
Query: 1234 LVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSI 1413
R+S YLM++M +EAL++AM+AQ ISP W++A YLQ+ ALS LG E E+ AL +G++
Sbjct: 420 HARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAM 479
Query: 1414 LEARK 1428
LE+++
Sbjct: 480 LESKR 484
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
Posted date: Feb 27, 2003 4:02 PM
Number of letters in database: 431,508,457
Number of sequences in database: 1,347,713
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 127
effective length of database: 260,348,906
effective search space used: 92684210536
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)