BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01660.f
(1707 letters)
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
1,347,713 sequences; 431,508,457 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171672.1| hypothetical protein; protein id: At1g0166... 962 0.0
gb|AAF78397.1|AC009273_3 Contains similarity to a putative ... 956 0.0
gb|AAO00872.1| putative protein kinase [Arabidopsis thaliana] 186 7e-46
pir||T47931 hypothetical protein T20K12.290 - Arabidopsis t... 156 1e-36
ref|NP_171673.1| hypothetical protein; protein id: At1g0167... 155 2e-36
>ref|NP_171672.1| hypothetical protein; protein id: At1g01660.1 [Arabidopsis thaliana]
Length = 568
Score = 962 bits (2488), Expect = 0.0
Identities = 497/568 (87%), Positives = 497/568 (87%)
Frame = +1
Query: 1 MAELMAMGNDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLEEL 180
MAELMAMGNDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLEEL
Sbjct: 1 MAELMAMGNDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLEEL 60
Query: 181 EAIMYETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDHH 360
EAIMYETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDHH
Sbjct: 61 EAIMYETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDHH 120
Query: 361 YSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPKL 540
YSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPKL
Sbjct: 121 YSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPKL 180
Query: 541 YSSASPKCSAELVSAIVAYIDTRRDRDMLEPNASEDQSESDRNDQLYRQLKQALMEVEES 720
YSSASPKCSAELVSAIVAYIDTRRDRDMLEPNASEDQSESDRNDQLYRQLKQALMEVEES
Sbjct: 181 YSSASPKCSAELVSAIVAYIDTRRDRDMLEPNASEDQSESDRNDQLYRQLKQALMEVEES 240
Query: 721 KREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQER 900
KREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQER
Sbjct: 241 KREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQER 300
Query: 901 DDALIIILNGRKLYNEELRRRVXXXXXXXXXXXXXXXXXXXXXXVRAIVQDGTLYNEQLR 1080
DDALIIILNGRKLYNEELRRRV VRAIVQDGTLYNEQLR
Sbjct: 301 DDALIIILNGRKLYNEELRRRVEAEEMLGKEKEEHERTKKEIEEVRAIVQDGTLYNEQLR 360
Query: 1081 HXXXXXXXXXXXXXXXXXXXXXXXXACMISKNLMQLYEDEVRQXXXXXXXXXXXXXXXXX 1260
H ACMISKNLMQLYEDEVRQ
Sbjct: 361 HRKEMEESMKRQEEELEKTKKEKEEACMISKNLMQLYEDEVRQRKEAEELVKRRREELEK 420
Query: 1261 XXXXXXXXCSVGQNFMRLYEEEARRRKGTEEELSKVAAEKDAASSVCSEILLLLQSYTRR 1440
CSVGQNFMRLYEEEARRRKGTEEELSKVAAEKDAASSVCSEILLLLQSYTRR
Sbjct: 421 VKKEKEEACSVGQNFMRLYEEEARRRKGTEEELSKVAAEKDAASSVCSEILLLLQSYTRR 480
Query: 1441 HGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPM 1620
HGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPM
Sbjct: 481 HGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPM 540
Query: 1621 TNLKLAHNNLVPNHALRSAIQEWLQRNS 1704
TNLKLAHNNLVPNHALRSAIQEWLQRNS
Sbjct: 541 TNLKLAHNNLVPNHALRSAIQEWLQRNS 568
>gb|AAF78397.1|AC009273_3 Contains similarity to a putative protein T2J13.100 gi|6522560 from
Arabidopsis thaliana BAC T2J13
gb|AL132967|gi|25517986|pir||E86147 T1N6.4 protein -
Arabidopsis thaliana
Length = 952
Score = 956 bits (2470), Expect = 0.0
Identities = 497/575 (86%), Positives = 497/575 (86%), Gaps = 7/575 (1%)
Frame = +1
Query: 1 MAELMAMGNDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLEEL 180
MAELMAMGNDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLEEL
Sbjct: 378 MAELMAMGNDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLEEL 437
Query: 181 EAIMYETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDHH 360
EAIMYETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDHH
Sbjct: 438 EAIMYETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDHH 497
Query: 361 YSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPKL 540
YSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPKL
Sbjct: 498 YSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPKL 557
Query: 541 YSSASPKCSAELVSAIVAYIDTRRDRDMLEPNASEDQSESDRNDQLYRQLKQALMEVEES 720
YSSASPKCSAELVSAIVAYIDTRRDRDMLEPNASEDQSESDRNDQLYRQLKQALMEVEES
Sbjct: 558 YSSASPKCSAELVSAIVAYIDTRRDRDMLEPNASEDQSESDRNDQLYRQLKQALMEVEES 617
Query: 721 KREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQER 900
KREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQER
Sbjct: 618 KREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQER 677
Query: 901 DDALIIILNGRKLYNEELRRRVXXXXXXXXXXXXXXXXXXXXXXVRAIVQDGT------- 1059
DDALIIILNGRKLYNEELRRRV VRAIVQDGT
Sbjct: 678 DDALIIILNGRKLYNEELRRRVEAEEMLGKEKEEHERTKKEIEEVRAIVQDGTVRNRSMQ 737
Query: 1060 LYNEQLRHXXXXXXXXXXXXXXXXXXXXXXXXACMISKNLMQLYEDEVRQXXXXXXXXXX 1239
LYNEQLRH ACMISKNLMQLYEDEVRQ
Sbjct: 738 LYNEQLRHRKEMEESMKRQEEELEKTKKEKEEACMISKNLMQLYEDEVRQRKEAEELVKR 797
Query: 1240 XXXXXXXXXXXXXXXCSVGQNFMRLYEEEARRRKGTEEELSKVAAEKDAASSVCSEILLL 1419
CSVGQNFMRLYEEEARRRKGTEEELSKVAAEKDAASSVCSEILLL
Sbjct: 798 RREELEKVKKEKEEACSVGQNFMRLYEEEARRRKGTEEELSKVAAEKDAASSVCSEILLL 857
Query: 1420 LQSYTRRHGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDN 1599
LQSYTRRHGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDN
Sbjct: 858 LQSYTRRHGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDN 917
Query: 1600 GHETSPMTNLKLAHNNLVPNHALRSAIQEWLQRNS 1704
GHETSPMTNLKLAHNNLVPNHALRSAIQEWLQRNS
Sbjct: 918 GHETSPMTNLKLAHNNLVPNHALRSAIQEWLQRNS 952
Score = 167 bits (424), Expect = 4e-40
Identities = 115/312 (36%), Positives = 173/312 (54%), Gaps = 22/312 (7%)
Frame = +1
Query: 25 NDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLE--ELEAIMY- 195
+D V+VAV DV +SR TLLWAL+ L AKK+ +LHV+Q + +P++ LE E++AI
Sbjct: 8 DDPVYVAVSEDVDQSRLTLLWALKTLRAKKLHLLHVHQLISMTPSSSGLEQSEIDAIQEL 67
Query: 196 ------ETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDH 357
+TL Y D C EGV E D+ +SC N V + I+ELI+++ IKKL+MGA +D
Sbjct: 68 EQTSRNDTLLKYHDICIDEGVIEQDVDMSCFSANSVGEWIVELIYQNNIKKLIMGATADS 127
Query: 358 HYSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPK 537
HYSE M + KA YV QHAP C + +C+G+LI T+E E AG +
Sbjct: 128 HYSEGMVHITPTKADYVIQHAPHCCNIWLVCNGNLIQTREGRFE--------HAGSA--- 176
Query: 538 LYSSASPKCSAELVSAIVAYIDTRRDRDMLEPNA---SEDQS---------ESDRNDQLY 681
YSS+S S + SA++ Y R + EP+A SE+QS ++ +++Y
Sbjct: 177 -YSSSSSLHSID--SALIPYGGAGRAERVTEPHALSSSEEQSAILICSIVKQARGIEKMY 233
Query: 682 RQLKQALMEVEESKREAYEECVRRFKAENTAVEAIRSAREY-EAMYNEEAKLRKEGKEAL 858
+ ++ +E+EE KRE + R K EA+ S+ + +YNEE R+E + L
Sbjct: 234 YEEQRRRLEIEELKREKEQ----RDKMRRVREEALSSSSGVTKILYNEEVMRRREVEAEL 289
Query: 859 AKQRKMVEKTKQ 894
+ + +E K+
Sbjct: 290 NRAKAEIEDMKR 301
>gb|AAO00872.1| putative protein kinase [Arabidopsis thaliana]
Length = 834
Score = 186 bits (473), Expect = 7e-46
Identities = 119/350 (34%), Positives = 188/350 (53%), Gaps = 57/350 (16%)
Frame = +1
Query: 25 NDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASP--------AARKLEEL 180
++ + VAV V +S+STL+WAL+N G KK+C++HV+QP P A K EE+
Sbjct: 44 DEKIFVAVDKHVAKSKSTLIWALQNTGGKKICLIHVHQPSQMIPLMGAKFPVGAVKEEEV 103
Query: 181 EAI-------MYETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVM 339
++ L DY CQQ GV + ++I EM ++ GI++LI E I+KLVM
Sbjct: 104 RVFREKEREKVHMILDDYLRICQQRGVRAEKMFI---EMESIENGIVQLISELGIRKLVM 160
Query: 340 GAASDHHYSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEA 519
GAA+D HYS +M DLKSRKA +V + AP+ C++ F C G+LI+T+EA ++D TESE
Sbjct: 161 GAAADRHYSRRMTDLKSRKAIFVRREAPTLCQIWFTCKGYLIHTREATMDD----TESEY 216
Query: 520 GQSKPKLYSS------ASPKC---------SAELVSAIVAYIDTRRDRDMLEP---NASE 645
+P + +S ++P+ S + V +V+ + + N E
Sbjct: 217 ASPRPSISASDLLQTFSTPESEHQHISRVQSTDSVQQLVSNGSSTEQSGRVSDGSLNTDE 276
Query: 646 DQSESDR------------------------NDQLYRQLKQALMEVEESKREAYEECVRR 753
++ ESD +D ++++A E SK+EA+ E +RR
Sbjct: 277 EERESDGSEVTGSATVMSSGHSSPSSFPDGVDDSFNVKIRKATSEAHSSKQEAFAETLRR 336
Query: 754 FKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQERD 903
KAE A++AIR A++ E+ Y+EE K RK+ + A+AK+++ K E++
Sbjct: 337 QKAEKNALDAIRRAKQSESAYSEELKRRKDTEIAVAKEKERFITIKNEQE 386
Score = 119 bits (299), Expect = 1e-25
Identities = 57/100 (57%), Positives = 73/100 (73%)
Frame = +1
Query: 1402 SEILLLLQSYTRRHGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESL 1581
+E+ +L+ G S F + R P YFICPI QEVM++P VAADGFTYEAE++
Sbjct: 734 TEVWRVLEPMRASSGGSSSFHLGRNEHRIAPPYFICPIFQEVMQDPHVAADGFTYEAEAI 793
Query: 1582 REWLDNGHETSPMTNLKLAHNNLVPNHALRSAIQEWLQRN 1701
R WLD+ H+TSPMTN+KL+H +L+ NHALRSAIQEWLQ +
Sbjct: 794 RAWLDSEHDTSPMTNVKLSHTSLIANHALRSAIQEWLQHH 833
>pir||T47931 hypothetical protein T20K12.290 - Arabidopsis
thaliana|gi|6850906|emb|CAB71069.1| putative protein
[Arabidopsis thaliana]|gi|15233094|ref|NP_191698.1|
putative protein; protein id: At3g61390.1 [Arabidopsis
thaliana]
Length = 426
Score = 156 bits (394), Expect = 1e-36
Identities = 97/294 (32%), Positives = 156/294 (52%), Gaps = 4/294 (1%)
Frame = +1
Query: 34 VHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTAS----PAARKLEELEAIMYET 201
++VAV ES+S+L+WA++N G K+ CI+HV+QP R + + ++
Sbjct: 27 IYVAVTEKDLESKSSLVWAIQNSGGKEFCIVHVHQPIPGEMFHEQKLRLYRKEKDKAHKN 86
Query: 202 LHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDHHYSEKMFD 381
Y C+Q V + IYI E + V++GIL+LI + + KLVMGAA+D HYS +M D
Sbjct: 87 SEKYLQICRQMQVTAEIIYI---ETDSVEKGILQLISQRGVTKLVMGAAADRHYSMRMRD 143
Query: 382 LKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPKLYSSASPK 561
LKS+KA Y+++ AP++C + F C+G+LI
Sbjct: 144 LKSKKAIYIHREAPATCLIWFTCNGYLI-------------------------------- 171
Query: 562 CSAELVSAIVAYIDTRRDRDMLEPNASEDQSESDRNDQLYRQLKQALMEVEESKREAYEE 741
CS E A Y++ + + + + ++D +K A+ E E SKR+A E
Sbjct: 172 CSREARRANNLYLECASSNSLSQSDITRGTESIVKDDD--HLIKLAVTEAEASKRKARFE 229
Query: 742 CVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQERD 903
+R +AE TAV+A++ A+++E +Y EE K RKE ++AL K+ +EK + E +
Sbjct: 230 ACKREEAEKTAVDALKKAKQWENVYFEELKQRKETEKALRKRNDELEKMRSESE 283
Score = 112 bits (279), Expect = 2e-23
Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 32/160 (20%)
Frame = +1
Query: 1312 LYEEEARRRKGTE-------EELSKVAAEKDAASSVCSEILLLLQSYT------------ 1434
+Y EE ++RK TE +EL K+ +E + + ++ LQ
Sbjct: 253 VYFEELKQRKETEKALRKRNDELEKMRSESETQITESYTVIRKLQEKNNLSMETFRGIRE 312
Query: 1435 ---------RRHGTPSGFSDEDSVT----RQPPSYFICPISQEVMREPRVAADGFTYEAE 1575
R G +E+ + R+PP YFICPI+ ++M +P VAADGFTYE E
Sbjct: 313 EQEELKIKLREVSKLKGKREEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGE 372
Query: 1576 SLREWLDNGHETSPMTNLKLAHNNLVPNHALRSAIQEWLQ 1695
++ W + GHETSPM N +L H +LVPN ALRSAIQEWLQ
Sbjct: 373 AISRWFERGHETSPMINKRLPHTSLVPNLALRSAIQEWLQ 412
>ref|NP_171673.1| hypothetical protein; protein id: At1g01670.1 [Arabidopsis
thaliana]
Length = 407
Score = 155 bits (391), Expect = 2e-36
Identities = 110/302 (36%), Positives = 167/302 (54%), Gaps = 12/302 (3%)
Frame = +1
Query: 25 NDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLE--ELEAIMY- 195
+D V+VAV DV +SR TLLWAL+ L AKK+ +LHV+Q + +P++ LE E++AI
Sbjct: 8 DDPVYVAVSEDVDQSRLTLLWALKTLRAKKLHLLHVHQLISMTPSSSGLEQSEIDAIQEL 67
Query: 196 ------ETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDH 357
+TL Y D C EGV+ + N V + I+ELI+++ IKKL+MGA +D
Sbjct: 68 EQTSRNDTLLKYHDICIDEGVS------ALPTTNSVGEWIVELIYQNNIKKLIMGATADS 121
Query: 358 HYSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPK 537
HYSE M + KA YV QHAP C + +C+G+LI T+E E AG +
Sbjct: 122 HYSEGMVHITPTKADYVIQHAPHCCNIWLVCNGNLIQTREGRFE--------HAGSA--- 170
Query: 538 LYSSASPKCSAELVSAIVAYIDTRRDRDMLEPNA-SEDQSESDRN-DQLYRQLKQALMEV 711
YSS+S S + SA++ Y R + EP+A S + +S R +++Y + ++ +E+
Sbjct: 171 -YSSSSSLHSID--SALIPYGGAGRAERVTEPHALSSSEEQSARGIEKMYYEEQRRRLEI 227
Query: 712 EESKREAYEECVRRFKAENTAVEAIRSAREY-EAMYNEEAKLRKEGKEALAKQRKMVEKT 888
EE KRE + R K EA+ S+ + +YNEE R+E + L + + +E
Sbjct: 228 EELKREKEQ----RDKMRRVREEALSSSSGVTKILYNEEVMRRREVEAELNRAKAEIEDM 283
Query: 889 KQ 894
K+
Sbjct: 284 KR 285
Score = 110 bits (276), Expect = 5e-23
Identities = 62/155 (40%), Positives = 86/155 (55%), Gaps = 25/155 (16%)
Frame = +1
Query: 1312 LYEEEARRRKGTEEELSKVAAE-------------------------KDAASSVCSEILL 1416
LY EE RR+ E EL++ AE +D A E+L
Sbjct: 258 LYNEEVMRRREVEAELNRAKAEIEDMKRVQIELKEQHYADCRLLEKERDEAIKTTEELLR 317
Query: 1417 LLQSYTRRHGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLD 1596
L+ S + SV+ +PP FICPIS+++M+ P VAADG+TYEA+ R WL+
Sbjct: 318 ALEK------GESSIPLQWSVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLN 371
Query: 1597 NGHETSPMTNLKLAHNNLVPNHALRSAIQEWLQRN 1701
+G E SPMTNL+L + NL+PN LRSAI++WLQ++
Sbjct: 372 HGGEKSPMTNLRLENRNLIPNLVLRSAIKDWLQQH 406
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
Posted date: Feb 27, 2003 4:02 PM
Number of letters in database: 431,508,457
Number of sequences in database: 1,347,713
Lambda K H
0.316 0.130 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 128
effective length of database: 259,001,193
effective search space used: 113960524920
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)