BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01570.f
(1437 letters)
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
1,347,713 sequences; 431,508,457 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171663.1| hypothetical protein; protein id: At1g0157... 933 0.0
gb|AAF81315.1|AC061957_11 Contains similarity to a hypothet... 933 0.0
pir||T01541 hypothetical protein A_IG005I10.16 - Arabidopsi... 587 e-166
ref|NP_198961.1| putative protein; protein id: At5g41460.1 ... 543 e-153
ref|NP_567683.1| Expressed protein; protein id: At4g23490.1... 540 e-152
>ref|NP_171663.1| hypothetical protein; protein id: At1g01570.1 [Arabidopsis thaliana]
Length = 478
Score = 933 bits (2412), Expect = 0.0
Identities = 452/478 (94%), Positives = 452/478 (94%)
Frame = +1
Query: 1 MSRXXXXXXXXXXXXXXVFYPLNFISSSSQPLIKFXXXXXXXXXXXXHEPDQTELKHVVF 180
MSR VFYPLNFISSSSQPLIKF HEPDQTELKHVVF
Sbjct: 1 MSRLIFLILAILFSLQFVFYPLNFISSSSQPLIKFSVSPVVSGSGSVHEPDQTELKHVVF 60
Query: 181 GIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQNDNVSKTLPPIRISSDTSRFQY 360
GIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQNDNVSKTLPPIRISSDTSRFQY
Sbjct: 61 GIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQNDNVSKTLPPIRISSDTSRFQY 120
Query: 361 RYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLVKVLRKYDHNQ 540
RYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLVKVLRKYDHNQ
Sbjct: 121 RYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLVKVLRKYDHNQ 180
Query: 541 FYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRYSELYGSDDRIH 720
FYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRYSELYGSDDRIH
Sbjct: 181 FYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRYSELYGSDDRIH 240
Query: 721 ACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPVFPNMGRVNAMR 900
ACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPVFPNMGRVNAMR
Sbjct: 241 ACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPVFPNMGRVNAMR 300
Query: 901 RFMVPAKLDSPSLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMVIPTRTFIDWYK 1080
RFMVPAKLDSPSLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMVIPTRTFIDWYK
Sbjct: 301 RFMVPAKLDSPSLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMVIPTRTFIDWYK 360
Query: 1081 QADERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDMWEPECDWDMSD 1260
QADERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDMWEPECDWDMSD
Sbjct: 361 QADERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDMWEPECDWDMSD 420
Query: 1261 PSEFERVIVYKKPDPDRWNKHRAPRRDCCRVLPTTKNGTMVIDVGACKDDEFAEFLVK 1434
PSEFERVIVYKKPDPDRWNKHRAPRRDCCRVLPTTKNGTMVIDVGACKDDEFAEFLVK
Sbjct: 421 PSEFERVIVYKKPDPDRWNKHRAPRRDCCRVLPTTKNGTMVIDVGACKDDEFAEFLVK 478
>gb|AAF81315.1|AC061957_11 Contains similarity to a hypothetical protein F16G20.190 gi|7485555
from Arabidopsis thaliana BAC F16G20
gb|T05387|gi|25336194|pir||D86146 F22L4.11 protein -
Arabidopsis thaliana
Length = 509
Score = 933 bits (2412), Expect = 0.0
Identities = 452/478 (94%), Positives = 452/478 (94%)
Frame = +1
Query: 1 MSRXXXXXXXXXXXXXXVFYPLNFISSSSQPLIKFXXXXXXXXXXXXHEPDQTELKHVVF 180
MSR VFYPLNFISSSSQPLIKF HEPDQTELKHVVF
Sbjct: 32 MSRLIFLILAILFSLQFVFYPLNFISSSSQPLIKFSVSPVVSGSGSVHEPDQTELKHVVF 91
Query: 181 GIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQNDNVSKTLPPIRISSDTSRFQY 360
GIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQNDNVSKTLPPIRISSDTSRFQY
Sbjct: 92 GIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQNDNVSKTLPPIRISSDTSRFQY 151
Query: 361 RYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLVKVLRKYDHNQ 540
RYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLVKVLRKYDHNQ
Sbjct: 152 RYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLVKVLRKYDHNQ 211
Query: 541 FYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRYSELYGSDDRIH 720
FYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRYSELYGSDDRIH
Sbjct: 212 FYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRYSELYGSDDRIH 271
Query: 721 ACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPVFPNMGRVNAMR 900
ACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPVFPNMGRVNAMR
Sbjct: 272 ACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPVFPNMGRVNAMR 331
Query: 901 RFMVPAKLDSPSLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMVIPTRTFIDWYK 1080
RFMVPAKLDSPSLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMVIPTRTFIDWYK
Sbjct: 332 RFMVPAKLDSPSLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMVIPTRTFIDWYK 391
Query: 1081 QADERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDMWEPECDWDMSD 1260
QADERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDMWEPECDWDMSD
Sbjct: 392 QADERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDMWEPECDWDMSD 451
Query: 1261 PSEFERVIVYKKPDPDRWNKHRAPRRDCCRVLPTTKNGTMVIDVGACKDDEFAEFLVK 1434
PSEFERVIVYKKPDPDRWNKHRAPRRDCCRVLPTTKNGTMVIDVGACKDDEFAEFLVK
Sbjct: 452 PSEFERVIVYKKPDPDRWNKHRAPRRDCCRVLPTTKNGTMVIDVGACKDDEFAEFLVK 509
>pir||T01541 hypothetical protein A_IG005I10.16 - Arabidopsis
thaliana|gi|18411279|ref|NP_567166.1| contains weak
similarity to S. cerevisiae BOB1 protein (PIR:S45444);
protein id: At4g00300.1 [Arabidopsis
thaliana]|gi|7267117|emb|CAB80788.1| contains weak
similarity to S. cerevisiae BOB1 protein
(PIR:S45444)~similarity to~contains EST gb:AW033356.1
[Arabidopsis thaliana]|gi|2252836|gb|AAB62835.1| contains
weak similarity to S. cerevisiae BOB1 protein
(PIR:S45444) [Arabidopsis
thaliana]|gi|6049878|gb|AAF02793.1|AF195115_13 contains
weak similarity to S. cerevisiae BOB1 protein
(PIR:S45444) [Arabidopsis thaliana]
Length = 785
Score = 587 bits (1512), Expect = e-166
Identities = 274/393 (69%), Positives = 326/393 (82%), Gaps = 3/393 (0%)
Frame = +1
Query: 151 DQTELKHVVFGIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQNDNVSKTLPPIR 330
+QTELKH+VFGIAAS+ WKHR++YVK WWKPNG MNG VWLD+ IN + S LP IR
Sbjct: 76 EQTELKHIVFGIAASSDLWKHRREYVKTWWKPNGVMNGAVWLDKPINDTVSSSSALPQIR 135
Query: 331 ISSDTSRFQYRYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLV 510
ISSDTS F+YRY G RSAIRITRIVSETVR+LNGTE E+NVRW+VMGDDDTVFF ENLV
Sbjct: 136 ISSDTSSFKYRYRNGHRSAIRITRIVSETVRMLNGTEAERNVRWVVMGDDDTVFFTENLV 195
Query: 511 KVLRKYDHNQFYYIGSSSESHIQNL-KFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRY 687
+VLRKYDH QFYYIG+ SESH+QNL +FSYGMAYGGGGFAISYPLAK LEKMQDRCI+RY
Sbjct: 196 RVLRKYDHKQFYYIGAPSESHLQNLHQFSYGMAYGGGGFAISYPLAKVLEKMQDRCIERY 255
Query: 688 SELYGSDDRIHACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPV 867
S+LYGSDDRIHACM+ELGVPLTKEVGFHQ D+YG LLGLLS HP AP+VSIHHLD+VDP+
Sbjct: 256 SDLYGSDDRIHACMAELGVPLTKEVGFHQFDVYGNLLGLLSVHPQAPIVSIHHLDVVDPI 315
Query: 868 FPNMGRVNAMRRFMVPAKLDSPSLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMV 1047
FP RVNA+++ M+PAKLDS SL QQS+CYD H+WT+S+SWGYTVQI R + AR M
Sbjct: 316 FPKTNRVNALKKLMIPAKLDSASLVQQSVCYDKSHQWTMSISWGYTVQITRTYMPARMME 375
Query: 1048 IPTRTFIDWYKQADERSYAFNTRPIAKSACQRPRVYYLSNALPDLAL--RRTASEYVRWY 1221
+PTRTF DW+ ++D + AFNTRP+ + CQRPRV+Y S+A + + T S+Y+R +
Sbjct: 376 VPTRTFNDWHLRSDFTNLAFNTRPVTWTDCQRPRVFYFSHAFSNSSSSDTTTISQYLR-H 434
Query: 1222 DMWEPECDWDMSDPSEFERVIVYKKPDPDRWNK 1320
D W P+C+W ++DPSE ++ VYKKP PDRW+K
Sbjct: 435 DEWYPKCEWGIADPSEINQIFVYKKPTPDRWSK 467
>ref|NP_198961.1| putative protein; protein id: At5g41460.1 [Arabidopsis
thaliana]|gi|9758054|dbj|BAB08517.1|
gene_id:MYC6.16~pir||T13026~strong similarity to unknown
protein [Arabidopsis thaliana]
Length = 524
Score = 543 bits (1399), Expect = e-153
Identities = 267/463 (57%), Positives = 341/463 (72%), Gaps = 10/463 (2%)
Frame = +1
Query: 64 LNFISSSSQPLIKFXXXXXXXXXXXXHEPD---------QTELKHVVFGIAASAKFWKHR 216
LN I +SSQPLI F P QT +HVVFGIAASA+ WK R
Sbjct: 70 LNDIVNSSQPLILFHTNQTAVIKSYASPPPSPPPPPPPPQTGFQHVVFGIAASARLWKQR 129
Query: 217 KDYVKLWWKPNGEMNGVVWLDQHINQNDNVSK-TLPPIRISSDTSRFQYRYPKGLRSAIR 393
K+Y+K+W+KPN +M VWL++ + + D + +LPP++IS DTS+F Y+ +G RSAIR
Sbjct: 130 KEYIKIWYKPN-QMRSYVWLEKPVTEEDEEDEISLPPVKISGDTSKFPYKNKQGHRSAIR 188
Query: 394 ITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLVKVLRKYDHNQFYYIGSSSESH 573
I+RIV+ET++L G K+VRW VMGDDDTVF ENL++VLRKYDHNQ YYIGS SESH
Sbjct: 189 ISRIVTETLKL--GL---KDVRWFVMGDDDTVFVAENLIRVLRKYDHNQMYYIGSLSESH 243
Query: 574 IQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRYSELYGSDDRIHACMSELGVPLT 753
+QN+ FSYGMAYGGGGFAISYPLA AL KMQDRCI+RY LYGSDDR+ ACM+ELGVPLT
Sbjct: 244 LQNIYFSYGMAYGGGGFAISYPLAVALSKMQDRCIKRYPALYGSDDRMQACMAELGVPLT 303
Query: 754 KEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPVFPNMGRVNAMRRFMVPAKLDSP 933
KE+GFHQ D+YG L GLL+AHP+APLV++HHLD+V+P+FPNM RV+A++ VPAKLDS
Sbjct: 304 KELGFHQYDVYGNLFGLLAAHPVAPLVTLHHLDVVEPIFPNMTRVDALKHLQVPAKLDSA 363
Query: 934 SLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMVIPTRTFIDWYKQADERSYAFNT 1113
L QQSICYD +WTVSVSWG+ VQI RG+ SARE+ +P+RTF++WY++AD +YAFNT
Sbjct: 364 GLMQQSICYDKRRKWTVSVSWGFAVQIFRGIFSAREIEMPSRTFLNWYRRADYTAYAFNT 423
Query: 1114 RPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDMWEPECDWDMSDPSEFERVIVYK 1293
RP+++ CQ+P V+Y+++ T S Y + + PEC W M++PS+ + VIVYK
Sbjct: 424 RPVSRHPCQKPFVFYMTSTRVHRVTNMTVSRY-EIHRVAHPECRWKMANPSDIKTVIVYK 482
Query: 1294 KPDPDRWNKHRAPRRDCCRVLPTTKNGTMVIDVGACKDDEFAE 1422
KPDP W+ R+PRR+CCRV + KN T+ I V CK+ E E
Sbjct: 483 KPDPHLWD--RSPRRNCCRV-KSKKNNTLEISVAVCKEGEVVE 522
>ref|NP_567683.1| Expressed protein; protein id: At4g23490.1, supported by cDNA:
gi_15529152 [Arabidopsis
thaliana]|gi|25090374|gb|AAN72287.1| At4g23490/F16G20_190
[Arabidopsis thaliana]
Length = 526
Score = 540 bits (1391), Expect = e-152
Identities = 257/425 (60%), Positives = 322/425 (75%), Gaps = 3/425 (0%)
Frame = +1
Query: 157 TELKHVVFGIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQN---DNVSKTLPPI 327
T+L HVVFGIAAS+K WK RK+Y+K+W+KP M G VWLD+ + ++ D+ K LPP+
Sbjct: 109 TDLNHVVFGIAASSKLWKQRKEYIKIWYKPK-RMRGYVWLDKEVKKSLSDDDDEKLLPPV 167
Query: 328 RISSDTSRFQYRYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENL 507
+IS T+ F Y +G RSA+RI+RIVSET+RL KNVRW VMGDDDTVF +NL
Sbjct: 168 KISGGTASFPYTNKQGQRSALRISRIVSETLRLG-----PKNVRWFVMGDDDTVFVIDNL 222
Query: 508 VKVLRKYDHNQFYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRY 687
++VLRKYDH Q YYIGS SESH+QN+ FSYGMAYGGGGFAISYPLAKAL KMQDRCIQRY
Sbjct: 223 IRVLRKYDHEQMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIQRY 282
Query: 688 SELYGSDDRIHACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPV 867
LYGSDDR+ ACM+ELGVPLTKE+GFHQ D+YG L GLL+AHP+ P VS+HHLD+V+P+
Sbjct: 283 PALYGSDDRMQACMAELGVPLTKELGFHQYDVYGNLFGLLAAHPVTPFVSMHHLDVVEPI 342
Query: 868 FPNMGRVNAMRRFMVPAKLDSPSLAQQSICYDADHRWTVSVSWGYTVQIIRGVLSAREMV 1047
FPNM RV A+++ P KLDS L QQSICYD WT+SVSWGY VQI RG+ S REM
Sbjct: 343 FPNMTRVRALKKITEPMKLDSAGLLQQSICYDKHKSWTISVSWGYAVQIFRGIFSPREME 402
Query: 1048 IPTRTFIDWYKQADERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDM 1227
+P+RTF++WYK+AD +YAFNTRP++++ CQ+P V+Y+S+ D L T SEY + +
Sbjct: 403 MPSRTFLNWYKRADYTAYAFNTRPVSRNPCQKPFVFYMSSTKFDQQLNTTVSEYT-IHRV 461
Query: 1228 WEPECDWDMSDPSEFERVIVYKKPDPDRWNKHRAPRRDCCRVLPTTKNGTMVIDVGACKD 1407
P C W M++P+E ++VYKKPDP W R+PRR+CCRVL T +N T+ I+VG C+
Sbjct: 462 SHPSCRWKMTNPAEINTIVVYKKPDPHLW--ERSPRRNCCRVLQTKRNNTLWINVGVCRA 519
Query: 1408 DEFAE 1422
E E
Sbjct: 520 GEVTE 524
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
Posted date: Feb 27, 2003 4:02 PM
Number of letters in database: 431,508,457
Number of sequences in database: 1,347,713
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 127
effective length of database: 260,348,906
effective search space used: 91382466006
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)