BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01450.f
(1413 letters)
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
1,347,713 sequences; 431,508,457 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171652.1| hypothetical protein; protein id: At1g0145... 928 0.0
emb|CAA73313.1| hypothetical protein [Arabidopsis thaliana] 928 0.0
gb|AAF81305.1|AC061957_1 Contains similarity to a photorece... 887 0.0
gb|AAL11555.1|AF424561_1 At1g64300/F15H21_13 [Arabidopsis t... 426 e-118
pir||H96666 probable phytochrome F15H21.13 [imported] - Ara... 426 e-118
>ref|NP_171652.1| hypothetical protein; protein id: At1g01450.1 [Arabidopsis thaliana]
Length = 470
Score = 928 bits (2398), Expect = 0.0
Identities = 459/470 (97%), Positives = 459/470 (97%)
Frame = +1
Query: 1 MADFLLKHLGDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFGD 180
MADFLLKHLGDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFGD
Sbjct: 1 MADFLLKHLGDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFGD 60
Query: 181 IDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKNT 360
IDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKNT
Sbjct: 61 IDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKNT 120
Query: 361 LSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLNS 540
LSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLNS
Sbjct: 121 LSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLNS 180
Query: 541 VKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQSGTAGSLKYSDKSDVYSFGMVSFELLT 720
VKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQSGTAGSLKYSDKSDVYSFGMVSFELLT
Sbjct: 181 VKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQSGTAGSLKYSDKSDVYSFGMVSFELLT 240
Query: 721 GKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSISRIL 900
GKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSISRIL
Sbjct: 241 GKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSISRIL 300
Query: 901 RYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWESTELTKVSQVPFQMFAY 1080
RYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWESTELTKVSQVPFQMFAY
Sbjct: 301 RYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWESTELTKVSQVPFQMFAY 360
Query: 1081 RVVERAKTCEKDNLREPSESGSEWASCSEDEGGAGSDEQLSYAKERRLSCSSNDVGMSKK 1260
RVVERAKTCEKDNLREPSESGSEWASCSEDEGGAGSDEQLSYAKERRLSCSSNDVGMSKK
Sbjct: 361 RVVERAKTCEKDNLREPSESGSEWASCSEDEGGAGSDEQLSYAKERRLSCSSNDVGMSKK 420
Query: 1261 QVSNLLKRASSLKPIQKPGEXXXXXXXXXXXGSLTNMNLVTCTNFFVLCH 1410
QVSNLLKRASSLKPIQKPGE GSLTNMNLVTCTNFFVLCH
Sbjct: 421 QVSNLLKRASSLKPIQKPGEIIISQYIYIYIGSLTNMNLVTCTNFFVLCH 470
>emb|CAA73313.1| hypothetical protein [Arabidopsis thaliana]
Length = 677
Score = 928 bits (2398), Expect = 0.0
Identities = 459/470 (97%), Positives = 459/470 (97%)
Frame = +1
Query: 1 MADFLLKHLGDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFGD 180
MADFLLKHLGDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFGD
Sbjct: 208 MADFLLKHLGDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFGD 267
Query: 181 IDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKNT 360
IDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKNT
Sbjct: 268 IDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKNT 327
Query: 361 LSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLNS 540
LSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLNS
Sbjct: 328 LSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLNS 387
Query: 541 VKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQSGTAGSLKYSDKSDVYSFGMVSFELLT 720
VKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQSGTAGSLKYSDKSDVYSFGMVSFELLT
Sbjct: 388 VKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQSGTAGSLKYSDKSDVYSFGMVSFELLT 447
Query: 721 GKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSISRIL 900
GKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSISRIL
Sbjct: 448 GKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSISRIL 507
Query: 901 RYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWESTELTKVSQVPFQMFAY 1080
RYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWESTELTKVSQVPFQMFAY
Sbjct: 508 RYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWESTELTKVSQVPFQMFAY 567
Query: 1081 RVVERAKTCEKDNLREPSESGSEWASCSEDEGGAGSDEQLSYAKERRLSCSSNDVGMSKK 1260
RVVERAKTCEKDNLREPSESGSEWASCSEDEGGAGSDEQLSYAKERRLSCSSNDVGMSKK
Sbjct: 568 RVVERAKTCEKDNLREPSESGSEWASCSEDEGGAGSDEQLSYAKERRLSCSSNDVGMSKK 627
Query: 1261 QVSNLLKRASSLKPIQKPGEXXXXXXXXXXXGSLTNMNLVTCTNFFVLCH 1410
QVSNLLKRASSLKPIQKPGE GSLTNMNLVTCTNFFVLCH
Sbjct: 628 QVSNLLKRASSLKPIQKPGEIIISQYIYIYIGSLTNMNLVTCTNFFVLCH 677
>gb|AAF81305.1|AC061957_1 Contains similarity to a photoreceptor from Ceratodon purpureus
gb|Y10901 and contains an eukaryotic protein kinase
PF|00069 domain. ESTs gb|N96753, gb|AI993724 come from
this gene. [Arabidopsis thaliana]|gi|25518342|pir||B86145
hypothetical protein F22L4.1 [imported] - Arabidopsis
thaliana
Length = 1025
Score = 887 bits (2291), Expect = 0.0
Identities = 438/438 (100%), Positives = 438/438 (100%)
Frame = +1
Query: 1 MADFLLKHLGDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFGD 180
MADFLLKHLGDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFGD
Sbjct: 532 MADFLLKHLGDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFGD 591
Query: 181 IDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKNT 360
IDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKNT
Sbjct: 592 IDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKNT 651
Query: 361 LSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLNS 540
LSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLNS
Sbjct: 652 LSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLNS 711
Query: 541 VKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQSGTAGSLKYSDKSDVYSFGMVSFELLT 720
VKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQSGTAGSLKYSDKSDVYSFGMVSFELLT
Sbjct: 712 VKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQSGTAGSLKYSDKSDVYSFGMVSFELLT 771
Query: 721 GKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSISRIL 900
GKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSISRIL
Sbjct: 772 GKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSISRIL 831
Query: 901 RYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWESTELTKVSQVPFQMFAY 1080
RYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWESTELTKVSQVPFQMFAY
Sbjct: 832 RYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWESTELTKVSQVPFQMFAY 891
Query: 1081 RVVERAKTCEKDNLREPSESGSEWASCSEDEGGAGSDEQLSYAKERRLSCSSNDVGMSKK 1260
RVVERAKTCEKDNLREPSESGSEWASCSEDEGGAGSDEQLSYAKERRLSCSSNDVGMSKK
Sbjct: 892 RVVERAKTCEKDNLREPSESGSEWASCSEDEGGAGSDEQLSYAKERRLSCSSNDVGMSKK 951
Query: 1261 QVSNLLKRASSLKPIQKP 1314
QVSNLLKRASSLKPIQKP
Sbjct: 952 QVSNLLKRASSLKPIQKP 969
>gb|AAL11555.1|AF424561_1 At1g64300/F15H21_13 [Arabidopsis thaliana]|gi|22655480|gb|AAM98332.1|
At1g64300/F15H21_13 [Arabidopsis
thaliana]|gi|18408017|ref|NP_564829.1| phytochrome,
putative; protein id: At1g64300.1, supported by cDNA:
gi_15983373 [Arabidopsis thaliana]
Length = 717
Score = 426 bits (1095), Expect = e-118
Identities = 221/385 (57%), Positives = 278/385 (71%), Gaps = 4/385 (1%)
Frame = +1
Query: 1 MADFLLKHL-GDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFG 177
+ADFLLK L G + KLFPSS+L +KDYQV++RLG G QYKEI WLG+SF LRHFFG
Sbjct: 210 LADFLLKKLTGLEQFNGKLFPSSILVGSKDYQVRRRLGGGGQYKEIQWLGDSFVLRHFFG 269
Query: 178 DIDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKN 357
D++ L +I+ LLSL H NI+ YLCGF DEE+KEC LVMELM K L ++KE CGPR++
Sbjct: 270 DLEPLNAEISSLLSLCHSNILQYLCGFYDEERKECSLVMELMHKDLKSYMKENCGPRRRY 329
Query: 358 TLSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLN 537
S+PV +D+MLQIA GMEYLHS I+HG+LNP NIL+K RS+ +GY KI GFGL
Sbjct: 330 LFSVPVVIDIMLQIARGMEYLHSNEIFHGDLNPMNILLKERSHT--EGYFHAKISGFGLT 387
Query: 538 SVKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQ--SGTAGSLKYSDKSDVYSFGMVSFE 711
SVK S AS + P IWY+PEVL E EQ GTA K++ K+DVYSF MV FE
Sbjct: 388 SVKNQSFSRASSRPTTPD-PVIWYAPEVLAEMEQDLKGTAPRSKFTHKADVYSFAMVCFE 446
Query: 712 LLTGKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSIS 891
L+TGKVPFED HLQGDKM++NIR GERPLFPF SPK++ +L KRCWH++P+QRPTFSSI
Sbjct: 447 LITGKVPFEDDHLQGDKMAKNIRTGERPLFPFPSPKYLVSLIKRCWHSEPSQRPTFSSIC 506
Query: 892 RILRYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWES-TELTKVSQVPFQ 1068
RILRYIK+FL +NP+ Q+ P VD ++E + L+K S ES + V+Q+PFQ
Sbjct: 507 RILRYIKKFLVVNPDHGHLQIQN----PLVDCWDLEARFLKKFSMESGSHAGSVTQIPFQ 562
Query: 1069 MFAYRVVERAKTCEKDNLREPSESG 1143
+++YR+ E+ K N E S++G
Sbjct: 563 LYSYRIAEKEKMSPNFNKEENSDAG 587
>pir||H96666 probable phytochrome F15H21.13 [imported] - Arabidopsis
thaliana|gi|12323479|gb|AAG51718.1|AC066689_17
phytochrome, putative; 80131-78152 [Arabidopsis thaliana]
Length = 636
Score = 426 bits (1095), Expect = e-118
Identities = 221/385 (57%), Positives = 278/385 (71%), Gaps = 4/385 (1%)
Frame = +1
Query: 1 MADFLLKHL-GDGNESPKLFPSSLLDNTKDYQVKKRLGNGSQYKEITWLGESFALRHFFG 177
+ADFLLK L G + KLFPSS+L +KDYQV++RLG G QYKEI WLG+SF LRHFFG
Sbjct: 187 LADFLLKKLTGLEQFNGKLFPSSILVGSKDYQVRRRLGGGGQYKEIQWLGDSFVLRHFFG 246
Query: 178 DIDALLPQITPLLSLSHPNIVYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVCGPRKKN 357
D++ L +I+ LLSL H NI+ YLCGF DEE+KEC LVMELM K L ++KE CGPR++
Sbjct: 247 DLEPLNAEISSLLSLCHSNILQYLCGFYDEERKECSLVMELMHKDLKSYMKENCGPRRRY 306
Query: 358 TLSLPVAVDLMLQIALGMEYLHSKRIYHGELNPSNILVKPRSNQSGDGYLLGKIFGFGLN 537
S+PV +D+MLQIA GMEYLHS I+HG+LNP NIL+K RS+ +GY KI GFGL
Sbjct: 307 LFSVPVVIDIMLQIARGMEYLHSNEIFHGDLNPMNILLKERSHT--EGYFHAKISGFGLT 364
Query: 538 SVKGFSSKSASLTSQNENFPFIWYSPEVLEEQEQ--SGTAGSLKYSDKSDVYSFGMVSFE 711
SVK S AS + P IWY+PEVL E EQ GTA K++ K+DVYSF MV FE
Sbjct: 365 SVKNQSFSRASSRPTTPD-PVIWYAPEVLAEMEQDLKGTAPRSKFTHKADVYSFAMVCFE 423
Query: 712 LLTGKVPFEDSHLQGDKMSRNIRAGERPLFPFNSPKFITNLTKRCWHADPNQRPTFSSIS 891
L+TGKVPFED HLQGDKM++NIR GERPLFPF SPK++ +L KRCWH++P+QRPTFSSI
Sbjct: 424 LITGKVPFEDDHLQGDKMAKNIRTGERPLFPFPSPKYLVSLIKRCWHSEPSQRPTFSSIC 483
Query: 892 RILRYIKRFLALNPECYSSSQQDPSIAPTVDYCEIETKLLQKLSWES-TELTKVSQVPFQ 1068
RILRYIK+FL +NP+ Q+ P VD ++E + L+K S ES + V+Q+PFQ
Sbjct: 484 RILRYIKKFLVVNPDHGHLQIQN----PLVDCWDLEARFLKKFSMESGSHAGSVTQIPFQ 539
Query: 1069 MFAYRVVERAKTCEKDNLREPSESG 1143
+++YR+ E+ K N E S++G
Sbjct: 540 LYSYRIAEKEKMSPNFNKEENSDAG 564
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
Posted date: Feb 27, 2003 4:02 PM
Number of letters in database: 431,508,457
Number of sequences in database: 1,347,713
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 127
effective length of database: 260,348,906
effective search space used: 89299674758
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)