BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01440.f
(1995 letters)
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
1,347,713 sequences; 431,508,457 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171651.1| hypothetical protein; protein id: At1g0144... 1175 0.0
gb|AAF97336.1|AC023628_17 Hypothetical protein [Arabidopsi... 947 0.0
emb|CAB80918.1| hypothetical protein [Arabidopsis thaliana]... 614 e-174
gb|AAB61021.1| contains weak similarity to Galectin-3 bindi... 574 e-162
pir||T47959 hypothetical protein F15G16.60 - Arabidopsis th... 300 7e-80
>ref|NP_171651.1| hypothetical protein; protein id: At1g01440.1 [Arabidopsis thaliana]
Length = 664
Score = 1175 bits (3039), Expect = 0.0
Identities = 590/664 (88%), Positives = 590/664 (88%)
Frame = +1
Query: 1 MRTSGDVYGADTGSSRSDEDRGFKEDLNESATSPMRNRLDDSNSRPGSQRFVXXXXXXXX 180
MRTSGDVYGADTGSSRSDEDRGFKEDLNESATSPMRNRLDDSNSRPGSQRFV
Sbjct: 1 MRTSGDVYGADTGSSRSDEDRGFKEDLNESATSPMRNRLDDSNSRPGSQRFVKSSRKEEE 60
Query: 181 XXXXXXXXXXXXXXXXPIQYTDKQQAELLRKLDSIKDHLLRGGGNNATVVDQPPMGFHAH 360
PIQYTDKQQAELLRKLDSIKDHLLRGGGNNATVVDQPPMGFHAH
Sbjct: 61 TDSDSSSSKNTTTRNNPIQYTDKQQAELLRKLDSIKDHLLRGGGNNATVVDQPPMGFHAH 120
Query: 361 HGXXXXXXXXXXXXXXXGMYPTASNQPHVPAYRDPYGFPVHRIPQNFYQGPSHXXXXXXX 540
HG GMYPTASNQPHVPAYRDPYGFPVHRIPQNFYQGPSH
Sbjct: 121 HGPPPSYYNPYPEPFPYGMYPTASNQPHVPAYRDPYGFPVHRIPQNFYQGPSHYPNQMPP 180
Query: 541 XXXXXXXXXVDIGSDILESQLQDPRFFPGTPSRYGDVPFSPALHHGEKVGPFSPHGGVHT 720
VDIGSDILESQLQDPRFFPGTPSRYGDVPFSPALHHGEKVGPFSPHGGVHT
Sbjct: 181 RPPYPQGQYVDIGSDILESQLQDPRFFPGTPSRYGDVPFSPALHHGEKVGPFSPHGGVHT 240
Query: 721 RWPSEIDSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLYVPKKKLLGQ 900
RWPSEIDSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLYVPKKKLLGQ
Sbjct: 241 RWPSEIDSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLYVPKKKLLGQ 300
Query: 901 ERQQKMQCGACSEVITFRVVDKKLVFSSSALGETTNRVSVEVEDRSSPIPVVDDYPLNDE 1080
ERQQKMQCGACSEVITFRVVDKKLVFSSSALGETTNRVSVEVEDRSSPIPVVDDYPLNDE
Sbjct: 301 ERQQKMQCGACSEVITFRVVDKKLVFSSSALGETTNRVSVEVEDRSSPIPVVDDYPLNDE 360
Query: 1081 EPRIHQETKIVHAVSPSDHSNDEDRSSISSEPRKQVVKSVRSRAQGAKVXXXXXXEKSNL 1260
EPRIHQETKIVHAVSPSDHSNDEDRSSISSEPRKQVVKSVRSRAQGAKV EKSNL
Sbjct: 361 EPRIHQETKIVHAVSPSDHSNDEDRSSISSEPRKQVVKSVRSRAQGAKVPPPPPPEKSNL 420
Query: 1261 LELFEYSNVNRAAITYGMAQLGYYKQESYTKQDSLKSESVATETDVXXXXXXXXXXXXXD 1440
LELFEYSNVNRAAITYGMAQLGYYKQESYTKQDSLKSESVATETDV D
Sbjct: 421 LELFEYSNVNRAAITYGMAQLGYYKQESYTKQDSLKSESVATETDVSYNEYYTNTEESED 480
Query: 1441 SRISKASKEGRRPRNRKQSSEHSFAEVTNNISSNDQNNEQLEVWVNGYLIPEDLVISAEK 1620
SRISKASKEGRRPRNRKQSSEHSFAEVTNNISSNDQNNEQLEVWVNGYLIPEDLVISAEK
Sbjct: 481 SRISKASKEGRRPRNRKQSSEHSFAEVTNNISSNDQNNEQLEVWVNGYLIPEDLVISAEK 540
Query: 1621 QAGPVQAGKYWYDYRAGFWGVMGNPCLGIIPPFIEEFSRPMPDNCGAGNTSVFVNGRELH 1800
QAGPVQAGKYWYDYRAGFWGVMGNPCLGIIPPFIEEFSRPMPDNCGAGNTSVFVNGRELH
Sbjct: 541 QAGPVQAGKYWYDYRAGFWGVMGNPCLGIIPPFIEEFSRPMPDNCGAGNTSVFVNGRELH 600
Query: 1801 ERDLELLSSRGLPRGKNRSYIIDIAGRVLDGDSGEELKSLGRLAPTVDKVKHGFGMRVPR 1980
ERDLELLSSRGLPRGKNRSYIIDIAGRVLDGDSGEELKSLGRLAPTVDKVKHGFGMRVPR
Sbjct: 601 ERDLELLSSRGLPRGKNRSYIIDIAGRVLDGDSGEELKSLGRLAPTVDKVKHGFGMRVPR 660
Query: 1981 SLVS 1992
SLVS
Sbjct: 661 SLVS 664
>gb|AAF97336.1|AC023628_17 Hypothetical protein [Arabidopsis thaliana]|gi|25518286|pir||A86145
hypothetical protein F6F3.24 - Arabidopsis thaliana
Length = 564
Score = 947 bits (2447), Expect = 0.0
Identities = 480/562 (85%), Positives = 482/562 (85%)
Frame = +1
Query: 1 MRTSGDVYGADTGSSRSDEDRGFKEDLNESATSPMRNRLDDSNSRPGSQRFVXXXXXXXX 180
MRTSGDVYGADTGSSRSDEDRGFKEDLNESATSPMRNRLDDSNSRPGSQRFV
Sbjct: 1 MRTSGDVYGADTGSSRSDEDRGFKEDLNESATSPMRNRLDDSNSRPGSQRFVKSSRKEEE 60
Query: 181 XXXXXXXXXXXXXXXXPIQYTDKQQAELLRKLDSIKDHLLRGGGNNATVVDQPPMGFHAH 360
PIQYTDKQQAELLRKLDSIKDHLLRGGGNNATVVDQPPMGFHAH
Sbjct: 61 TDSDSSSSKNTTTRNNPIQYTDKQQAELLRKLDSIKDHLLRGGGNNATVVDQPPMGFHAH 120
Query: 361 HGXXXXXXXXXXXXXXXGMYPTASNQPHVPAYRDPYGFPVHRIPQNFYQGPSHXXXXXXX 540
HG GMYPTASNQPHVPAYRDPYGFPVHRIPQNFYQGPSH
Sbjct: 121 HGPPPSYYNPYPEPFPYGMYPTASNQPHVPAYRDPYGFPVHRIPQNFYQGPSHYPNQMPP 180
Query: 541 XXXXXXXXXVDIGSDILESQLQDPRFFPGTPSRYGDVPFSPALHHGEKVGPFSPHGGVHT 720
VDIGSDILESQLQDPRFFPGTPSRYGDVPFSPALHHGEKVGPFSPHGGVHT
Sbjct: 181 RPPYPQGQYVDIGSDILESQLQDPRFFPGTPSRYGDVPFSPALHHGEKVGPFSPHGGVHT 240
Query: 721 RWPSEIDSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLYVPKKKLLGQ 900
RWPSEIDSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLYVPKKKLLGQ
Sbjct: 241 RWPSEIDSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLYVPKKKLLGQ 300
Query: 901 ERQQKMQCGACSEVITFRVVDKKLVFSSSALGETTNRVSVEVEDRSSPIPVVDDYPLNDE 1080
ERQQKMQCGACSEVITFRVVDKKLVFSSSALGETTNRVSVEVEDRSSPIPVVDDYPLNDE
Sbjct: 301 ERQQKMQCGACSEVITFRVVDKKLVFSSSALGETTNRVSVEVEDRSSPIPVVDDYPLNDE 360
Query: 1081 EPRIHQETKIVHAVSPSDHSNDEDRSSISSEPRKQVVKSVRSRAQGAKVXXXXXXEKSNL 1260
EPRIHQETKIVHAVSPSDHSNDEDRSSISSEPRKQVVKSVRSRAQGAKV EKSNL
Sbjct: 361 EPRIHQETKIVHAVSPSDHSNDEDRSSISSEPRKQVVKSVRSRAQGAKVPPPPPPEKSNL 420
Query: 1261 LELFEYSNVNRAAITYGMAQLGYYKQESYTKQDSLKSESVATETDVXXXXXXXXXXXXXD 1440
LELFEYSNVNRAAITYGMAQLGYYKQESYTKQDSLKSESVATETDV D
Sbjct: 421 LELFEYSNVNRAAITYGMAQLGYYKQESYTKQDSLKSESVATETDVSYNEYYTNTEESED 480
Query: 1441 SRISKASKEGRRPRNRKQSSEHSFAEVTNNISSNDQNNEQLEVWVNGYLIPEDLVISAEK 1620
SRISKASKEGRRPRNRKQSSEHSFAEVTNNISSNDQNNEQLEVWVNGYLIPEDLVISAEK
Sbjct: 481 SRISKASKEGRRPRNRKQSSEHSFAEVTNNISSNDQNNEQLEVWVNGYLIPEDLVISAEK 540
Query: 1621 QAGPVQAGKYWYDYRAGFWGVM 1686
QAGPVQAGKYWY WG++
Sbjct: 541 QAGPVQAGKYWY-----VWGMI 557
>emb|CAB80918.1| hypothetical protein [Arabidopsis
thaliana]|gi|20334762|gb|AAM16242.1| AT4g01090/F2N1_13
[Arabidopsis thaliana]|gi|17979014|gb|AAL47466.1|
AT4g01090/F2N1_13 [Arabidopsis
thaliana]|gi|15234061|ref|NP_192018.1| hypothetical
protein; protein id: At4g01090.1, supported by cDNA:
gi_17979013, supported by cDNA: gi_20334761 [Arabidopsis
thaliana]|gi|25407080|pir||D85014 hypothetical protein
AT4g01090 [imported] - Arabidopsis thaliana
Length = 714
Score = 614 bits (1583), Expect = e-174
Identities = 374/750 (49%), Positives = 444/750 (58%), Gaps = 86/750 (11%)
Frame = +1
Query: 1 MRTSGDVYGA-----DTGSSRSDEDRGFKEDLNESATSPMRNRLDDSNSRPGSQRFVXXX 165
MR+ GDV A D GSSRS+E+ KE SNSR GSQR
Sbjct: 1 MRSRGDVSEAEGTRSDAGSSRSEEETSLKEK--------------HSNSRAGSQRSGKSL 46
Query: 166 XXXXXXXXXXXXXXXXXXXXXPIQYTDKQQAELLRKLDSIKDHLLRGGGNNATVVDQP-- 339
PI+YT+ ++AELLR+LDSIKDHLLRGGG VVD+P
Sbjct: 47 RNDEPNYGSDSSSKNTSSSNNPIEYTEHERAELLRRLDSIKDHLLRGGGGGNNVVDKPKE 106
Query: 340 ---------PMGFHAHHGXXXXXXXXXXXXXXXGMYPTASNQPHVPAYRDPYGFPVH--R 486
P+ H H YP + + AY+DPYG+
Sbjct: 107 PDQNQPFLRPVHLHGHANHNPGPSYYHQYPEPI-QYPGPVHGMYPQAYQDPYGYQRRPPP 165
Query: 487 IPQNFYQGPSHXXXXXXXXXXXXXXXXVDIGSDILESQLQDPRFFPGTPSRYGDV-PFSP 663
+P + P H V++G DI+E ++P TP RYGD+ P+SP
Sbjct: 166 VPNPNWYPPGH--YPNQMARQYPGGQYVELGPDIVEPH----SYYPATPGRYGDLPPYSP 219
Query: 664 ------------------------ALHHGEKV-GPFSPH----------------GGVHT 720
+ H GEK+ P+SP G +
Sbjct: 220 VSSHHREEKLATQYSDMPPYSPVSSHHRGEKLTTPYSPRVNNGSSFPSSMGTPGPRGGYA 279
Query: 721 RWPSEIDSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLYVPKKKLLGQ 900
RWPSE DSEMGGAFARGYV++AVSDT RRCHPLAGGAPFIACHSCFELLY+PKKKLL Q
Sbjct: 280 RWPSEHDSEMGGAFARGYVKKAVSDTGVRRCHPLAGGAPFIACHSCFELLYLPKKKLLSQ 339
Query: 901 ERQQKMQCGACSEVITFRVVDKKLVFSSSALGETTNRVSVEVEDRSSPIPVV-------- 1056
ER K+QCGACSEVI+F +VD+KLVFSS E T VS+EVEDR++ VV
Sbjct: 340 ERLHKLQCGACSEVISFTIVDRKLVFSSG--NEETKPVSLEVEDRNTTNTVVIEEEVSSV 397
Query: 1057 ------DDYPLNDEEP-----RIHQETKIVHAV-SPSDHSNDEDRSSISSEPRKQVVKSV 1200
D P DEE R HQ+T +V S S HS+DE+RSS SSE +++ VKSV
Sbjct: 398 DFNSSGRDIPRKDEEEPVQELRNHQDTITTQSVRSESQHSDDEERSSNSSEQQQKEVKSV 457
Query: 1201 RSRAQGAKVXXXXXXEKSNLLELFEYSNVNRAAITYGMAQLGYY---KQESYTKQDSLKS 1371
R R +G+K + ++LLELFEYSNVNRAA+ YGMAQLGY KQ+S+ QDSLK
Sbjct: 458 RRRGKGSKAPEPAAPDNASLLELFEYSNVNRAALAYGMAQLGYEKPDKQKSFMTQDSLKP 517
Query: 1372 ESVATETDVXXXXXXXXXXXXXDSRISKASKEGRRPRNRKQSSEHSFAEVTNNISSNDQN 1551
ESVATET+V ++ IS+ S+ R + SE+ E+T SS DQN
Sbjct: 518 ESVATETEV-------SYNGYSNTEISEDSRYSNR-----KGSEYGSTEITTR-SSTDQN 564
Query: 1552 NEQ---LEVWVNGYLIPEDLVISAEKQAGPVQAGKYWYDYRAGFWGVMGNPCLGIIPPFI 1722
+Q LEVWVNG+LIPEDLV SAEK AGP+QAGKYWYDYRAGFWGVMG PCLGIIPPFI
Sbjct: 565 EDQMKSLEVWVNGHLIPEDLVSSAEKLAGPIQAGKYWYDYRAGFWGVMGKPCLGIIPPFI 624
Query: 1723 EEFSRPMPDNCGAGNTSVFVNGRELHERDLELLSSRGLPRGKNRSYIIDIAGRVLDGDSG 1902
EEFS PM DNC AGNT VFVNGRELH+RD ELL RGLPR KNRSYI+DI+GR+LD DSG
Sbjct: 625 EEFSHPMLDNCAAGNTDVFVNGRELHKRDFELLVGRGLPRDKNRSYIVDISGRILDQDSG 684
Query: 1903 EELKSLGRLAPTVDKVKHGFGMRVPRSLVS 1992
EEL SLG+LAPT++KVKHGFGMRVPRSL S
Sbjct: 685 EELHSLGKLAPTIEKVKHGFGMRVPRSLAS 714
>gb|AAB61021.1| contains weak similarity to Galectin-3 binding protein [Arabidopsis
thaliana]|gi|7485220|pir||T01730 hypothetical protein
A_IG002N01.13 - Arabidopsis thaliana
Length = 705
Score = 574 bits (1480), Expect = e-162
Identities = 359/741 (48%), Positives = 427/741 (57%), Gaps = 95/741 (12%)
Frame = +1
Query: 1 MRTSGDVYGA-----DTGSSRSDEDRGFKEDLNESATSPMRNRLDDSNSRPGSQRFVXXX 165
MR+ GDV A D GSSRS+E+ KE SNSR GSQR
Sbjct: 1 MRSRGDVSEAEGTRSDAGSSRSEEETSLKEK--------------HSNSRAGSQRSGKSL 46
Query: 166 XXXXXXXXXXXXXXXXXXXXXPIQYTDKQQAELLRKLDSIKDHLLRGGGNNATVVDQP-- 339
PI+YT+ ++AELLR+LDSIKDHLLRGGG VVD+P
Sbjct: 47 RNDEPNYGSDSSSKNTSSSNNPIEYTEHERAELLRRLDSIKDHLLRGGGGGNNVVDKPKE 106
Query: 340 ---------PMGFHAHHGXXXXXXXXXXXXXXXGMYPTASNQPHVPAYRDPYGFPVH--R 486
P+ H H YP + + AY+DPYG+
Sbjct: 107 PDQNQPFLRPVHLHGHANHNPGPSYYHQYPEPI-QYPGPVHGMYPQAYQDPYGYQRRPPP 165
Query: 487 IPQNFYQGPSHXXXXXXXXXXXXXXXXVDIGSDILESQLQDPRFFPGTPSRYGDV-PFSP 663
+P + P H V++G DI+E ++P TP RYGD+ P+SP
Sbjct: 166 VPNPNWYPPGH--YPNQMARQYPGGQYVELGPDIVEPH----SYYPATPGRYGDLPPYSP 219
Query: 664 ------------------------ALHHGEKV-GPFSPH----------------GGVHT 720
+ H GEK+ P+SP G +
Sbjct: 220 VSSHHREEKLATQYSDMPPYSPVSSHHRGEKLTTPYSPRVNNGSSFPSSMGTPGPRGGYA 279
Query: 721 RWPSEIDSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLYVPKKKLLGQ 900
RWPSE DSEMGGAFARGYV++AVSDT RRCHPLAGGAPFIACHSCFELLY+PKKKLL Q
Sbjct: 280 RWPSEHDSEMGGAFARGYVKKAVSDTGVRRCHPLAGGAPFIACHSCFELLYLPKKKLLSQ 339
Query: 901 ERQQKMQCGACSEVITFRVVDKKLVFSSSALGETTNRVSVEVEDRSSPIPVV-------- 1056
ER K+QCGACSEVI+F +VD+KLVFSS E T VS+EVEDR++ VV
Sbjct: 340 ERLHKLQCGACSEVISFTIVDRKLVFSSG--NEETKPVSLEVEDRNTTNTVVIEEEVSSV 397
Query: 1057 ------DDYPLNDEEP-----RIHQETKIVHAV-SPSDHSNDEDRSSISSEPRKQVVKSV 1200
D P DEE R HQ+T +V S S HS+DE+RSS SSE +++ VKSV
Sbjct: 398 DFNSSGRDIPRKDEEEPVQELRNHQDTITTQSVRSESQHSDDEERSSNSSEQQQKEVKSV 457
Query: 1201 RSRAQGAKVXXXXXXEKSNLLELFEYSNVNRAAITYGMAQLGYY---KQESYTKQDSLKS 1371
R R +G+K + ++LLELFEYSNVNRAA+ YGMAQLGY KQ+S+ QDSLK
Sbjct: 458 RRRGKGSKAPEPAAPDNASLLELFEYSNVNRAALAYGMAQLGYEKPDKQKSFMTQDSLKP 517
Query: 1372 ESVATETDVXXXXXXXXXXXXXDSRISKASKEGRRPRNRKQSSEHSFAEVTNNISSNDQN 1551
ESVATET+V ++ IS+ S+ R + SE+ E+T SS DQN
Sbjct: 518 ESVATETEV-------SYNGYSNTEISEDSRYSNR-----KGSEYGSTEITTR-SSTDQN 564
Query: 1552 NEQ---LEVWVNGYLIPEDLVISAEKQAGPVQAGKYW---------YDYRAGFWGVMGNP 1695
+Q LEVWVNG+LIPEDLV SAEK AGP+QAGKYW YDYRAGFWGVMG P
Sbjct: 565 EDQMKSLEVWVNGHLIPEDLVSSAEKLAGPIQAGKYWYFHELQHPLYDYRAGFWGVMGKP 624
Query: 1696 CLGIIPPFIEEFSRPMPDNCGAGNTSVFVNGRELHERDLELLSSRGLPRGKNRSYIIDIA 1875
CLGIIPPFIEEFS PM DNC AGNT VFVNGRELH+RD ELL RGLPR KNRSYI+DI+
Sbjct: 625 CLGIIPPFIEEFSHPMLDNCAAGNTDVFVNGRELHKRDFELLVGRGLPRDKNRSYIVDIS 684
Query: 1876 GRVLDGDSGEELKSLGRLAPT 1938
GR+LD DSGEEL SLG+LAPT
Sbjct: 685 GRILDQDSGEELHSLGKLAPT 705
>pir||T47959 hypothetical protein F15G16.60 - Arabidopsis
thaliana|gi|6850858|emb|CAB71097.1| putative protein
[Arabidopsis thaliana]|gi|15233180|ref|NP_191726.1|
putative protein; protein id: At3g61670.1 [Arabidopsis
thaliana]
Length = 790
Score = 300 bits (767), Expect = 7e-80
Identities = 209/644 (32%), Positives = 313/644 (48%), Gaps = 65/644 (10%)
Frame = +1
Query: 244 DKQQAELLRKLDSIKDHLLRG-------------GGNNATVVDQ-PPMGFHAHHGXXXXX 381
++ +A LLR+L+ IK+ L++ ++A+ +++ PPM FH+
Sbjct: 192 EQDRAGLLRQLEKIKEQLVQSCNVATDKSKEQAPSSSSASGLNKAPPMRFHS----TGNH 247
Query: 382 XXXXXXXXXXGMYPTASNQPHV---------PAYRDPYGFPVH-RIPQNFYQGPSHXXXX 531
+P +N + P+Y DP+ FP+H R P ++ G
Sbjct: 248 AVGGPSYYHQPQFPYNNNNINEAPMHHSLMHPSYGDPHRFPIHGRGPHPYFSGQ------ 301
Query: 532 XXXXXXXXXXXXVDIGSDILESQLQ----------------DPRFFPGTPSRYGDVPFSP 663
+ G D+ ++ Q D +++ G+ D P++
Sbjct: 302 --------YVGNNNNGHDLFDAYPQQNGHFHHSSCSCYHCYDNKYWRGSAPVVPDAPYNA 353
Query: 664 ALHHGEKVGPFSP------HGG----VHTRWPSEIDSEMGGAFARGYVQQAVSDTDSRRC 813
+ E V F+P +G H RWPS A +R + V SR
Sbjct: 354 GFYPHESVMGFAPPHNPRTYGSRGLQPHGRWPSNFSDAQMDALSRIRPPKVVLSGGSRHI 413
Query: 814 HPLAGGAPFIACHSCFELLYVPKKKLLGQERQQKMQCGACSEVITFRVVDKKLVFSSSAL 993
PLAGGAPFI C +CFELL +PKK G ++QQK++CGACS +I VV+ K V S++
Sbjct: 414 RPLAGGAPFITCQNCFELLQLPKKPEAGTKKQQKVRCGACSCLIDLSVVNNKFVLSTNTA 473
Query: 994 GETTNRVSVEVEDRSSPIPVVDDYPLN-------DEEPRI--------HQETKIVHAVSP 1128
V + S DDY L D+EPR Q+ + VH+ S
Sbjct: 474 STRQGEARVAADYTS------DDYDLLGYVFHSLDDEPRDLPGLISDKSQDMQHVHSHSA 527
Query: 1129 SDHSNDEDRSSISSEPRKQVVKSVRSRAQGAKVXXXXXXEKSNLLELFEYSNVNRAAITY 1308
S + S++++P + ++ + ++S S ++ ++
Sbjct: 528 SLSEGELSSDSLTAKPLAEAHENFVDYSS-------INHDRSGAGSRSSRSEHDKVTLSK 580
Query: 1309 GMAQLGYYKQESYTKQDSLKSESVATETDVXXXXXXXXXXXXXDSRISKASKEGRRPRNR 1488
A +Q+S+K S+A+E +V + +A K G +
Sbjct: 581 ATAM----------RQNSMKEVSLASEMEVNFNDYSHRNSGVSKDQQQRAKKSGFASIVK 630
Query: 1489 KQSSEHSFAEVTNNISSNDQNNEQLEVWVNGYLIPEDLVISAEKQAGPVQAGKYWYDYRA 1668
K SF ++T +I ND+ N+ V +NG+ + E L+ AEKQAG +Q G YWYDYRA
Sbjct: 631 K-----SFKDLTKSIQ-NDEGNKS-NVSINGHPLTERLLRKAEKQAGVIQPGNYWYDYRA 683
Query: 1669 GFWGVMGNPCLGIIPPFIEEFSRPMPDNCGAGNTSVFVNGRELHERDLELLSSRGLPRGK 1848
GFWGVMG P LGI+PPFIEE + PMP+NC G T VFVNGRELH +DL+LL+ RGLP +
Sbjct: 684 GFWGVMGGPGLGILPPFIEELNYPMPENCSGGTTGVFVNGRELHRKDLDLLAGRGLPPDR 743
Query: 1849 NRSYIIDIAGRVLDGDSGEELKSLGRLAPTVDKVKHGFGMRVPR 1980
+RSYI+DI GRV+D D+GEEL LG+LAPT++K+K GFGMR+P+
Sbjct: 744 DRSYIVDITGRVIDEDTGEELDCLGKLAPTIEKLKRGFGMRLPK 787
Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
Posted date: Feb 27, 2003 4:02 PM
Number of letters in database: 431,508,457
Number of sequences in database: 1,347,713
Lambda K H
0.315 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 130
effective length of database: 256,305,767
effective search space used: 136867279578
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)