BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At1g01400.f
         (615 letters)

Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr 
           1,347,713 sequences; 431,508,457 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||E86144  hypothetical protein F6F3.20 [imported] - Arabi...   347   7e-95
dbj|BAB11421.1|  gene_id:MUB3.6~unknown protein [Arabidopsis...    43   0.004
dbj|BAB51926.1|  unknown protein [Mesorhizobium loti]|gi|134...    36   0.34 
ref|NP_009934.1|  Protein with similarity to Npr1p protein k...    35   0.57 
emb|CAA77445.1|  hypothetical protein D240 [Saccharomyces ce...    35   0.57 

>pir||E86144 hypothetical protein F6F3.20 [imported] - Arabidopsis
           thaliana|gi|9665159|gb|AAF97343.1|AC023628_24
           Hypothetical protein [Arabidopsis
           thaliana]|gi|15223393|ref|NP_171647.1| hypothetical
           protein; protein id: At1g01400.1 [Arabidopsis thaliana]
          Length = 204

 Score =  347 bits (890), Expect = 7e-95
 Identities = 171/184 (92%), Positives = 171/184 (92%)
 Frame = +1

Query: 1   MEREEPIARNEVDHETPTKPDXXXXXXXXXXXXXTLNQSTQINQTGPRSVLHLQSQESHL 180
           MEREEPIARNEVDHETPTKPD             TLNQSTQINQTGPRSVLHLQSQESHL
Sbjct: 1   MEREEPIARNEVDHETPTKPDESASASSPRRSEETLNQSTQINQTGPRSVLHLQSQESHL 60

Query: 181 SNSTTTHASSPSVNVTPKPDLSSFSNTTATQEPSPSAGLQIRTIEKDRSPGSAFPRHKRL 360
           SNSTTTHASSPSVNVTPKPDLSSFSNTTATQEPSPSAGLQIRTIEKDRSPGSAFPRHKRL
Sbjct: 61  SNSTTTHASSPSVNVTPKPDLSSFSNTTATQEPSPSAGLQIRTIEKDRSPGSAFPRHKRL 120

Query: 361 PVFDEVCSGAVFPWYGPQEPDLPSSSGIGTMSANSHDDRRAYELAYPLPSRDIQSKKELR 540
           PVFDEVCSGAVFPWYGPQEPDLPSSSGIGTMSANSHDDRRAYELAYPLPSRDIQSKKELR
Sbjct: 121 PVFDEVCSGAVFPWYGPQEPDLPSSSGIGTMSANSHDDRRAYELAYPLPSRDIQSKKELR 180

Query: 541 NAHL 552
           NAHL
Sbjct: 181 NAHL 184



>dbj|BAB11421.1| gene_id:MUB3.6~unknown protein [Arabidopsis
           thaliana]|gi|15237731|ref|NP_201259.1| unknown protein;
           protein id: At5g64540.1 [Arabidopsis thaliana]
          Length = 440

 Score = 42.7 bits (99), Expect = 0.004
 Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 31/107 (28%)
 Frame = +1

Query: 103 TLNQSTQINQTGPRSVLHLQ-----SQESHLSNSTTTHASSPSVN--------------- 222
           T   S+Q+N T   S +H       + + + S +T+TH+SSPSV+               
Sbjct: 287 TTPSSSQLNTTTSDSPVHTPISTTLTVDLNTSTTTSTHSSSPSVDRLDTVAQIPDLSSSP 346

Query: 223 ------VTPKPDLSSFS--NTTATQEPS---PSAGLQIRTIEKDRSP 330
                 +T KPDL+S S    T TQ+P    PSAGL+  T  KD SP
Sbjct: 347 SDGLETMTQKPDLASPSAGRETETQKPGLALPSAGLRTMTRNKDWSP 393



>dbj|BAB51926.1| unknown protein [Mesorhizobium loti]|gi|13474571|ref|NP_106140.1|
           unknown protein [Mesorhizobium loti]
          Length = 338

 Score = 36.2 bits (82), Expect = 0.34
 Identities = 25/101 (24%), Positives = 40/101 (38%)
 Frame = +1

Query: 202 ASSPSVNVTPKPDLSSFSNTTATQEPSPSAGLQIRTIEKDRSPGSAFPRHKRLPVFDEVC 381
           A+ P+    P  ++         + PSP+      T++    P S  PR + LPV  ++ 
Sbjct: 39  AAEPAATAAPAIEIGD-------KAPSPTV-----TVDSPAQPASDAPRSRVLPVVPDIM 86

Query: 382 SGAVFPWYGPQEPDLPSSSGIGTMSANSHDDRRAYELAYPL 504
                P     +   P++SG  T  A   D+RR      PL
Sbjct: 87  PDETLPGVPAIDMSAPAASGAATEVAPDRDERRIRGRRLPL 127



>ref|NP_009934.1| Protein with similarity to Npr1p protein kinase; Sat4p
           [Saccharomyces cerevisiae]|gi|1907151|emb|CAA42325.1|
           hypothetical protein [Saccharomyces
           cerevisiae]|gi|242395|gb|AAB20894.1| putative protein
           kinase [Saccharomyces
           cerevisiae]|gi|125291|sp|P25333|SAT4_YEAST
           SERINE/THREONINE-PROTEIN KINASE
           SAT4|gi|279528|pir||OKBY8W probable protein kinase
           YCR008w (EC 2.7.1.-) - yeast  (Saccharomyces cerevisiae)
          Length = 603

 Score = 35.4 bits (80), Expect = 0.57
 Identities = 23/63 (36%), Positives = 32/63 (50%)
 Frame = +1

Query: 103 TLNQSTQINQTGPRSVLHLQSQESHLSNSTTTHASSPSVNVTPKPDLSSFSNTTATQEPS 282
           +LN    IN +   S   L S  S LS S T+  +  S +++PK    S SNT  T  P+
Sbjct: 110 SLNNHIDINTSKSSSAASLTSSVSALSLSPTSAINISSKSLSPKFSHHSNSNTAITPAPT 169

Query: 283 PSA 291
           P+A
Sbjct: 170 PTA 172



>emb|CAA77445.1| hypothetical protein D240 [Saccharomyces cerevisiae]
          Length = 241

 Score = 35.4 bits (80), Expect = 0.57
 Identities = 23/63 (36%), Positives = 32/63 (50%)
 Frame = +1

Query: 103 TLNQSTQINQTGPRSVLHLQSQESHLSNSTTTHASSPSVNVTPKPDLSSFSNTTATQEPS 282
           +LN    IN +   S   L S  S LS S T+  +  S +++PK    S SNT  T  P+
Sbjct: 110 SLNNHIDINTSKSSSAASLTSSVSALSLSPTSAINISSKSLSPKFSHHSNSNTAITPAPT 169

Query: 283 PSA 291
           P+A
Sbjct: 170 PTA 172



  Database: BlastDB/NCBI/blast/db/2003_02_27_02_00_4/nr
    Posted date:  Feb 27, 2003  4:02 PM
  Number of letters in database: 431,508,457
  Number of sequences in database:  1,347,713
  
Lambda     K      H
   0.311    0.127    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 431,508,457
effective HSP length: 117
effective length of database: 273,826,036
effective search space used: 23822865132
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)