BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.9811.C1
(9289 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190607.1| putative protein; protein id: At3g50380.1 ... 5727 0.0
ref|NP_596800.1| putative vacuolar protein sorting-associat... 53 1e-04
dbj|BAA32298.2| KIAA0453 protein [Homo sapiens] 48 0.003
ref|XP_044546.3| similar to KIAA0453 protein [Homo sapiens] 48 0.003
pir||T00067 hypothetical protein KIAA0453 - human (fragment) 48 0.003
>ref|NP_190607.1| putative protein; protein id: At3g50380.1 [Arabidopsis
thaliana]|gi|11280685|pir||T45584 hypothetical protein
F11C1.220 - Arabidopsis
thaliana|gi|6523049|emb|CAB62317.1| putative protein
[Arabidopsis thaliana]
Length = 3071
Score = 5727 bits (14858), Expect = 0.0
Identities = 2928/3072 (95%), Positives = 2930/3072 (95%)
Frame = +1
Query: 1 MTFLRNWVRRRLRTLLLPFSRDEPDLQVELGFTDTLITLRSFRFDVSQLNQLFDESNFQF 180
MTFLRNWVRRRLRTLLLPFSRDEPDLQVELGFTDTLITLRSFRFDVSQLNQLFDESNFQF
Sbjct: 1 MTFLRNWVRRRLRTLLLPFSRDEPDLQVELGFTDTLITLRSFRFDVSQLNQLFDESNFQF 60
Query: 181 EKFTVDQLVVSFSVWSAPAIKFEIRGVNVKLSARGTDEGSSRRKRASSDTVANEIKKVLS 360
EKFTVDQLVVSFSVWSAPAIKFEIRGVNVKLSARGTDEGSSRRKRASSDTVANEIKKVLS
Sbjct: 61 EKFTVDQLVVSFSVWSAPAIKFEIRGVNVKLSARGTDEGSSRRKRASSDTVANEIKKVLS 120
Query: 361 SIDPKGCVLHDILEKMLGRSTSQISKLKTSFSNLILRHFRIQIHGINVQVCLPGSSDLSC 540
SIDPKGCVLHDILEKMLGRSTSQISKLKTSFSNLILRHFRIQIHGINVQVCLPGSSDLSC
Sbjct: 121 SIDPKGCVLHDILEKMLGRSTSQISKLKTSFSNLILRHFRIQIHGINVQVCLPGSSDLSC 180
Query: 541 LMEINELRSDSENFGNLSLVRSSAAAVLFPLRRSSFTLSCFGFNIGYKRDNEIVDLCGFD 720
LMEINELRSDSENFGNLSLVRSSAAAVLFPLRRSSFTLSCFGFNIGYKRDNEIVDLCGFD
Sbjct: 181 LMEINELRSDSENFGNLSLVRSSAAAVLFPLRRSSFTLSCFGFNIGYKRDNEIVDLCGFD 240
Query: 721 SLVMLITLHNLQLVDLVVRVPELSFSFRPTDLPVLMGLANLSSKDSNYVRNGRYLWKVAA 900
SLVMLITLHNLQLVDLVVRVPELSFSFRPTDLPVLMGLANLSSKDSNYVRNGRYLWKVAA
Sbjct: 241 SLVMLITLHNLQLVDLVVRVPELSFSFRPTDLPVLMGLANLSSKDSNYVRNGRYLWKVAA 300
Query: 901 RRTGLMISPHSVSFQNLVSVVILWLRYVNAYEYLLSLAGYSRKMPEKSLLWKFSENKRHF 1080
RRTGLMISPHSVSFQNLVSVVILWLRYVNAYEYLLSLAGYSRKMPEKSLLWKFSENKRHF
Sbjct: 301 RRTGLMISPHSVSFQNLVSVVILWLRYVNAYEYLLSLAGYSRKMPEKSLLWKFSENKRHF 360
Query: 1081 VTARRKWEMICNIEKELPXXXXXXXXXXXXXXXCLNSQDADDDYDESSLYGHFKYLSKTT 1260
VTARRKWEMICNIEKELP CLNSQDADDDYDESSLYGHFKYLSKTT
Sbjct: 361 VTARRKWEMICNIEKELPAEAIARARRVARYRACLNSQDADDDYDESSLYGHFKYLSKTT 420
Query: 1261 WVLAYIWRLISRTFWSIACFLWLNKLLTQELQTDRNNEDDSECVSLEFHAVVNLGKLSVT 1440
WVLAYIWRLISRTFWSIACFLWLNKLLTQELQTDRNNEDDSECVSLEFHAVVNLGKLSVT
Sbjct: 421 WVLAYIWRLISRTFWSIACFLWLNKLLTQELQTDRNNEDDSECVSLEFHAVVNLGKLSVT 480
Query: 1441 CYPEKIISSFMTSKDSTGHVDSNIVMLCLSVDEFLVLYTVGCLTQYLSASCGKLKVESSS 1620
CYPEKIISSFMTSKDSTGHVDSNIVMLCLSVDEFLVLYTVGCLTQYLSASCGKLKVESSS
Sbjct: 481 CYPEKIISSFMTSKDSTGHVDSNIVMLCLSVDEFLVLYTVGCLTQYLSASCGKLKVESSS 540
Query: 1621 FKNTSRFMKSTKDPSSSSEGNKKHMREDVKTILDMDPAQQISKTVNNHGSDQHEGMLHLQ 1800
FKNTSRFMKSTKDPSSSSEGNKKHMREDVKTILDMDPAQQISKTVNNHGSDQHEGMLHLQ
Sbjct: 541 FKNTSRFMKSTKDPSSSSEGNKKHMREDVKTILDMDPAQQISKTVNNHGSDQHEGMLHLQ 600
Query: 1801 NLLREMWLNWNSNCMKLDKSTFTISDKPCLLVDIKSCMAYEVVGNQDSEFWKCSMVLGKL 1980
NLLREMWLNWNSNCMKLDKSTFTISDKPCLLVDIKSCMAYEVVGNQDSEFWKCSMVLGKL
Sbjct: 601 NLLREMWLNWNSNCMKLDKSTFTISDKPCLLVDIKSCMAYEVVGNQDSEFWKCSMVLGKL 660
Query: 1981 DIVFEYSSLFSLALLIWQIEWAQKLLVDDYTGEVHSSSLVTGGVDPEMASYDEYGIYRRS 2160
DIVFEYSSLFSLALLIWQIEWAQKLLVDDYTGEVHSSSLVTGGVDPEMASYDEYGIYRRS
Sbjct: 661 DIVFEYSSLFSLALLIWQIEWAQKLLVDDYTGEVHSSSLVTGGVDPEMASYDEYGIYRRS 720
Query: 2161 IELSLHRVHPERQIQVGILLGGPQIKLLVEKAEEVNTLIGKKDILLFDFHDFEFVIWPTY 2340
IELSLHRVHPERQIQVGILLGGPQIKLLVEKAEEVNTLIGKKDILLFDFHDFEFVIWPTY
Sbjct: 721 IELSLHRVHPERQIQVGILLGGPQIKLLVEKAEEVNTLIGKKDILLFDFHDFEFVIWPTY 780
Query: 2341 KSDVVSSRMFQGPDNIRTDRPLLQELGLSDTVIPSYEKYVSQGWNSLSSHLRFSGFDCSF 2520
KSDVVSSRMFQGPDNIRTDRPLLQELGLSDTVIPSYEKYVSQGWNSLSSHLRFSGFDCSF
Sbjct: 781 KSDVVSSRMFQGPDNIRTDRPLLQELGLSDTVIPSYEKYVSQGWNSLSSHLRFSGFDCSF 840
Query: 2521 CKMAVKNWSQVFVVRPVTICFSSLSEAIMDFSIGLDVFVLGLTIVTKPDDLNAYFQMXXX 2700
CKMAVKNWSQVFVVRPVTICFSSLSEAIMDFSIGLDVFVLGLTIVTKPDDLNAYFQM
Sbjct: 841 CKMAVKNWSQVFVVRPVTICFSSLSEAIMDFSIGLDVFVLGLTIVTKPDDLNAYFQMLLS 900
Query: 2701 XXXXXXXXXXXXXXXXXXXXQEFLRSDAVNVEHEIERNPCKTLFVVKASIKLKDIDVIFD 2880
QEFLRSDAVNVEHEIERNPCKTLFVVKASIKLKDIDVIFD
Sbjct: 901 LVSGLSRGLSGLSSGGHSSGQEFLRSDAVNVEHEIERNPCKTLFVVKASIKLKDIDVIFD 960
Query: 2881 VPAVDDKFERLVELDDTKIWSSVQEACIELSVEEHKCLINVDLCKLQSVLFKFEGNIWKS 3060
VPAVDDKFERLVELDDTKIWSSVQEACIELSVEEHKCLINVDLCKLQSVLFKFEGNIWKS
Sbjct: 961 VPAVDDKFERLVELDDTKIWSSVQEACIELSVEEHKCLINVDLCKLQSVLFKFEGNIWKS 1020
Query: 3061 SGNFITESLLFRSHDILFEACLSSCLLSVSMDCSSPSALGDASTANEPSTNNVQVQREVK 3240
SGNFITESLLFRSHDILFEACLSSCLLSVSMDCSSPSALGDASTANEPSTNNVQVQREVK
Sbjct: 1021 SGNFITESLLFRSHDILFEACLSSCLLSVSMDCSSPSALGDASTANEPSTNNVQVQREVK 1080
Query: 3241 TLDSASDLLPSNSIRWMHINLALTDLLVAKGSTKNVLVDVRRSSKFVTSVSIGRRFQSIS 3420
TLDSASDLLPSNSIRWMHINLALTDLLVAKGSTKNVLVDVRRSSKFVTSVSIGRRFQSIS
Sbjct: 1081 TLDSASDLLPSNSIRWMHINLALTDLLVAKGSTKNVLVDVRRSSKFVTSVSIGRRFQSIS 1140
Query: 3421 CSVEGVLFVLEPKALIGLIHGYSTYLYLISSKVSVIQNSAPVLEKFEADSSVTEISIPSQ 3600
CSVEGVLFVLEPKALIGLIHGYSTYLYLISSKVSVIQNSAPVLEKFEADSSVTEISIPSQ
Sbjct: 1141 CSVEGVLFVLEPKALIGLIHGYSTYLYLISSKVSVIQNSAPVLEKFEADSSVTEISIPSQ 1200
Query: 3601 QENGYPVEAFSIDVAQFALGFVCDDEYGAIREIVLEITLHSSLDSAGGEQKFLCEVSRLS 3780
QENGYPVEAFSIDVAQFALGFVCDDEYGAIREIVLEITLHSSLDSAGGEQKFLCEVSRLS
Sbjct: 1201 QENGYPVEAFSIDVAQFALGFVCDDEYGAIREIVLEITLHSSLDSAGGEQKFLCEVSRLS 1260
Query: 3781 VLSKILESVERDINITQXXXXXXXXXXXXXLPGTPLETSFQQSDVISSGDSTSVSGDFNS 3960
VLSKILESVERDINITQ LPGTPLETSFQQSDVISSGDSTSVSGDFNS
Sbjct: 1261 VLSKILESVERDINITQFSSPAFSSESSSFLPGTPLETSFQQSDVISSGDSTSVSGDFNS 1320
Query: 3961 LREFSANSNLQEEFHSRYNNYILEDLRVSASVKKRENTGHQFSQAWAGACSVLGFDITIS 4140
LREFSANSNLQEEFHSRYNNYILEDLRVSASVKKRENTGHQFSQAWAGACSVLGFDITIS
Sbjct: 1321 LREFSANSNLQEEFHSRYNNYILEDLRVSASVKKRENTGHQFSQAWAGACSVLGFDITIS 1380
Query: 4141 LSELQMVLSMLSLFAAIPGGDSAHASLXXXXXXXXXXXXXXXXXXXDAIVAIQDINQHMF 4320
LSELQMVLSMLSLFAAIPGGDSAHASL DAIVAIQDINQHMF
Sbjct: 1381 LSELQMVLSMLSLFAAIPGGDSAHASLERPSSFNSESERSFESVVPDAIVAIQDINQHMF 1440
Query: 4321 VTVEDGGNKCVVTGTLHYSLVGERALFRVSYHRHQGWNSSTLWFSLTSLYAKNNKGEPLR 4500
VTVEDGGNKCVVTGTLHYSLVGERALFRVSYHRHQGWNSSTLWFSLTSLYAKNNKGEPLR
Sbjct: 1441 VTVEDGGNKCVVTGTLHYSLVGERALFRVSYHRHQGWNSSTLWFSLTSLYAKNNKGEPLR 1500
Query: 4501 LNYHSSSDIVNVSGLYDNAPTLFRASSGESENYKGDIDWETYRKLVKDTFYLVNKKSDSA 4680
LNYHSSSDIVNVSGLYDNAPTLFRASSGESENYKGDIDWETYRKLVKDTFYLVNKKSDSA
Sbjct: 1501 LNYHSSSDIVNVSGLYDNAPTLFRASSGESENYKGDIDWETYRKLVKDTFYLVNKKSDSA 1560
Query: 4681 VAFIDGFPEFVRKPGNPFKFKVFHESLATRSLTPVVPSEIHESETHSVMVDSSPPSITVT 4860
VAFIDGFPEFVRKPGNPFKFKVFHESLATRSLTPVVPSEIHESETHSVMVDSSPPSITVT
Sbjct: 1561 VAFIDGFPEFVRKPGNPFKFKVFHESLATRSLTPVVPSEIHESETHSVMVDSSPPSITVT 1620
Query: 4861 IDGVSLTIVHELSETRDRFPLFRGSVNITQLTVQMLSSKVRIMSTSNILVLYFDAQTNQW 5040
IDGVSLTIVHELSETRDRFPLFRGSVNITQLTVQMLSSKVRIMSTSNILVLYFDAQTNQW
Sbjct: 1621 IDGVSLTIVHELSETRDRFPLFRGSVNITQLTVQMLSSKVRIMSTSNILVLYFDAQTNQW 1680
Query: 5041 REFIHPVEVSAFYRSTFQTRDLNNTMHKVPTHIYCRIGKLEVFLTELSLDMLLFLLGKLE 5220
REFIHPVEVSAFYRSTFQTRDLNNTMHKVPTHIYCRIGKLEVFLTELSLDMLLFLLGKLE
Sbjct: 1681 REFIHPVEVSAFYRSTFQTRDLNNTMHKVPTHIYCRIGKLEVFLTELSLDMLLFLLGKLE 1740
Query: 5221 FAGPFSVKTSAILSNCCKIENLSGLDLICRFNEKQTATVGRKQTAAIFLRHSMNHQQEAS 5400
FAGPFSVKTSAILSNCCKIENLSGLDLICRFNEKQTATVGRKQTAAIFLRHSMNHQQEAS
Sbjct: 1741 FAGPFSVKTSAILSNCCKIENLSGLDLICRFNEKQTATVGRKQTAAIFLRHSMNHQQEAS 1800
Query: 5401 PVAAVQLSSGKFITSSINVSLLEARTLAWRTRIISLLDSRSHPGPFVVVDIKKGLEDGLS 5580
PVAAVQLSSGKFITSSINVSLLEARTLAWRTRIISLLDSRSHPGPFVVVDIKKGLEDGLS
Sbjct: 1801 PVAAVQLSSGKFITSSINVSLLEARTLAWRTRIISLLDSRSHPGPFVVVDIKKGLEDGLS 1860
Query: 5581 ISVSPLTRIHNETSLPIEIRFQRSKQKRDEFASVPLKPGGSIDDSVAAFNAISSSGDMKK 5760
ISVSPLTRIHNETSLPIEIRFQRSKQKRDEFASVPLKPGGSIDDSVAAFNAISSSGDMKK
Sbjct: 1861 ISVSPLTRIHNETSLPIEIRFQRSKQKRDEFASVPLKPGGSIDDSVAAFNAISSSGDMKK 1920
Query: 5761 ALTSLAVGNFSLSFRPESFETLFXXXXXXXXXXXXXXXXXXAVRLTGIFDKLSYGVKKAL 5940
ALTSLAVGNFSLSFRPESFETLF AVRLTGIFDKLSYGVKKAL
Sbjct: 1921 ALTSLAVGNFSLSFRPESFETLFEGEKSLGSEWSEELEGGKAVRLTGIFDKLSYGVKKAL 1980
Query: 5941 SIESVKVSLTTTYCSVTSESQCVGKVHFLIHSIRREVSIIRPDASSDVLEKQKACIALRE 6120
SIESVKVSLTTTYCSVTSESQCVGKVHFLIHSIRREVSIIRPDASSDVLEKQKACIALRE
Sbjct: 1981 SIESVKVSLTTTYCSVTSESQCVGKVHFLIHSIRREVSIIRPDASSDVLEKQKACIALRE 2040
Query: 6121 QKEIFLLPTVQVSNFLSSEAAILLTETDQNTSMERHSIGKHATIQSGKTIDFYVNPDMIY 6300
QKEIFLLPTVQVSNFLSSEAAILLTETDQNTSMERHSIGKHATIQSGKTIDFYVNPDMIY
Sbjct: 2041 QKEIFLLPTVQVSNFLSSEAAILLTETDQNTSMERHSIGKHATIQSGKTIDFYVNPDMIY 2100
Query: 6301 FRVTLTTSQASCKPVNSGQWVKKLQKQKNDAQCLDVDLDFSGGKYCASLRLSLGKRGILE 6480
FRVTLTTSQASCKPVNSGQWVKKLQKQKNDAQCLDVDLDFSGGKYCASLRLSLGKRGILE
Sbjct: 2101 FRVTLTTSQASCKPVNSGQWVKKLQKQKNDAQCLDVDLDFSGGKYCASLRLSLGKRGILE 2160
Query: 6481 AAVFTSYILKNDSDCTLFFFPPDQKPLSREDMEKLDHIVPPEFGLYLPPKTEGSWFLRSR 6660
AAVFTSYILKNDSDCTLFFFPPDQKPLSREDMEKLDHIVPPEFGLYLPPKTEGSWFLRSR
Sbjct: 2161 AAVFTSYILKNDSDCTLFFFPPDQKPLSREDMEKLDHIVPPEFGLYLPPKTEGSWFLRSR 2220
Query: 6661 KVGVILADGHGATEAVLDLDALSGLTEISLGTKDESGFRHLVINESEETINIRQHYFQDD 6840
KVGVILADGHGATEAVLDLDALSGLTEISLGTKDESGFRHLVINESEETINIRQHYFQDD
Sbjct: 2221 KVGVILADGHGATEAVLDLDALSGLTEISLGTKDESGFRHLVINESEETINIRQHYFQDD 2280
Query: 6841 SVGIITIKSKQRAALRLQEETIQKKELHLFENFIKKHGSDSANSLIFIQFRKQSGEAGRG 7020
SVGIITIKSKQRAALRLQEETIQKKELHLFENFIKKHGSDSANSLIFIQFRKQSGEAGRG
Sbjct: 2281 SVGIITIKSKQRAALRLQEETIQKKELHLFENFIKKHGSDSANSLIFIQFRKQSGEAGRG 2340
Query: 7021 AIEFASVNVTEEGSTLAVHFQKPPNTPPPYRIENFLHSASLTYYQKDSSEIEVLGPGSGA 7200
AIEFASVNVTEEGSTLAVHFQKPPNTPPPYRIENFLHSASLTYYQKDSSEIEVLGPGSGA
Sbjct: 2341 AIEFASVNVTEEGSTLAVHFQKPPNTPPPYRIENFLHSASLTYYQKDSSEIEVLGPGSGA 2400
Query: 7201 DYAWDDMTLPHKLVVIVDGMIPLREVSLDKVRPWKPLFKATQHRSIASHLMMXXXXXXXX 7380
DYAWDDMTLPHKLVVIVDGMIPLREVSLDKVRPWKPLFKATQHRSIASHLMM
Sbjct: 2401 DYAWDDMTLPHKLVVIVDGMIPLREVSLDKVRPWKPLFKATQHRSIASHLMMKKKAKDHK 2460
Query: 7381 XXXXELSRIPMVKVGYEVYADGLTRVIRICEVSESLKGDSAFQSRSKIQFRVTHLGVHLL 7560
ELSRIPMVKVGYEVYADGLTRVIRICEVSESLKGDSAFQSRSKIQFRVTHLGVHLL
Sbjct: 2461 TADKELSRIPMVKVGYEVYADGLTRVIRICEVSESLKGDSAFQSRSKIQFRVTHLGVHLL 2520
Query: 7561 EKVKQNAEEKTVVSYSPILVARLENVGLHSMFTDQQKFNQLCIEALNVDHKWAGAPFAAM 7740
EKVKQNAEEKTVVSYSPILVARLENVGLHSMFTDQQKFNQLCIEALNVDHKWAGAPFAAM
Sbjct: 2521 EKVKQNAEEKTVVSYSPILVARLENVGLHSMFTDQQKFNQLCIEALNVDHKWAGAPFAAM 2580
Query: 7741 LRQHQSSSSDANGCLFKCVFILVSSGSSVTQVKHSSIVLQPVNLNLDEETLMRVVAFWRS 7920
LRQHQSSSSDANGCLFKCVFILVSSGSSVTQVKHSSIVLQPVNLNLDEETLMRVVAFWRS
Sbjct: 2581 LRQHQSSSSDANGCLFKCVFILVSSGSSVTQVKHSSIVLQPVNLNLDEETLMRVVAFWRS 2640
Query: 7921 SLSTNTQSSQYYFDHFEIHPIKITANFVPGSSYSSYNSAQETLRSLLHSVVKVPHIKNMV 8100
SLSTNTQSSQYYFDHFEIHPIKITANFVPGSSYSSYNSAQETLRSLLHSVVKVPHIKNMV
Sbjct: 2641 SLSTNTQSSQYYFDHFEIHPIKITANFVPGSSYSSYNSAQETLRSLLHSVVKVPHIKNMV 2700
Query: 8101 VELNGVLVTHALITVRELLLRCVKHYSWYAMRAIYIAKGSPLLPPXXXXXXXXXXXXXXX 8280
VELNGVLVTHALITVRELLLRCVKHYSWYAMRAIYIAKGSPLLPP
Sbjct: 2701 VELNGVLVTHALITVRELLLRCVKHYSWYAMRAIYIAKGSPLLPPAFASMFDDFSSSSLD 2760
Query: 8281 XXXXPSRGLVNVPGLTVGTFKLLSKLIDNKGLSGTRRYFGDLGKTLRTAGSNVVFVALTE 8460
PSRGLVNVPGLTVGTFKLLSKLIDNKGLSGTRRYFGDLGKTLRTAGSNVVFVALTE
Sbjct: 2761 AFFDPSRGLVNVPGLTVGTFKLLSKLIDNKGLSGTRRYFGDLGKTLRTAGSNVVFVALTE 2820
Query: 8461 ISDSFLRGAEMKGVDGLVSGFHHGILKLAMEPSVIGTALMEGGPDRTIKLDRNPGIDELY 8640
ISDS LRGAEMKGVDGLVSGFHHGILKLAMEPSVIGTALMEGGPDRTIKLDRNPGIDELY
Sbjct: 2821 ISDSVLRGAEMKGVDGLVSGFHHGILKLAMEPSVIGTALMEGGPDRTIKLDRNPGIDELY 2880
Query: 8641 NRRIPSSYVGYKCIRQEYLRVKVIDDQVFLKNLPPSNSLIDEMIDRVKDFLESRGLLKGD 8820
+ + RQEYLRVKVIDDQVFLKNLPPSNSLIDEMIDRVKDFLESRGLLKGD
Sbjct: 2881 IEGYLQAMLD-TMYRQEYLRVKVIDDQVFLKNLPPSNSLIDEMIDRVKDFLESRGLLKGD 2939
Query: 8821 PSSSRPRRRLHGDKEWKIGPTVLTLCEHLFVSFAIRILKQHATKAITSLRPKKEEAEAET 9000
PSSSRPRRRLHGDKEWKIGPTVLTLCEHLFVSFAIRILKQHATKAITSLRPKKEEAEAET
Sbjct: 2940 PSSSRPRRRLHGDKEWKIGPTVLTLCEHLFVSFAIRILKQHATKAITSLRPKKEEAEAET 2999
Query: 9001 SDSGSNTAMVPVVSDNXXXXXXXXXXAGIGNFVASGIVAYIDGRLCRQIPNPIARRIVSG 9180
SDSGSNTAMVPVVSDN AGIGNFVASGIVAYIDGRLCRQIPNPIARRIVSG
Sbjct: 3000 SDSGSNTAMVPVVSDNKKKKMKFMWKAGIGNFVASGIVAYIDGRLCRQIPNPIARRIVSG 3059
Query: 9181 FLLSFLDKSSEQ 9216
FLLSFLDKSSEQ
Sbjct: 3060 FLLSFLDKSSEQ 3071
>ref|NP_596800.1| putative vacuolar protein sorting-associated protein
[Schizosaccharomyces pombe]|gi|7493605|pir||T39553
vacuolar protein sorting-associated protein - fission
yeast (Schizosaccharomyces
pombe)|gi|2853094|emb|CAA16910.1| putative vacuolar
protein sorting-associated protein [Schizosaccharomyces
pombe]
Length = 3131
Score = 52.8 bits (125), Expect = 1e-04
Identities = 95/451 (21%), Positives = 175/451 (38%), Gaps = 60/451 (13%)
Frame = +1
Query: 7045 VTEEGSTLAVHFQKPPNTPPPYRIENFLHSASLTYYQK-------DSSEIE-------VL 7182
VT E +T V K P +R++N S + Y QK DS ++ L
Sbjct: 2290 VTLEDATFFVTITKEDKAWP-FRLKNCT-SREICYEQKRPDPESVDSRFLQGSRSMKYAL 2347
Query: 7183 GPGSGADYAWDDMTLPHKLVVIVDG--MIPLREVSLDKVRPWKPLFKATQHRSIASHLMM 7356
PG A+Y+WD L KL+ + G + L S+ ++ PW P
Sbjct: 2348 NPGEEANYSWDFPILKSKLLQVEVGKAIHDLDISSVGQLEPWHP---------------- 2391
Query: 7357 XXXXXXXXXXXXELSRIPMVKVGYEVYADGLTRVIRICEV-----------SESLKGDSA 7503
EL + +++ EV D LT ++ E+ + ++KG S
Sbjct: 2392 -----------TELDQ--KIRIHPEVKVDSLTSLVTFNEIDLSKPKLPSRTNSNVKG-SI 2437
Query: 7504 FQSRSKIQFRVTHLGVHLLEKVKQNAEEKTVVSYSPILVARLENVGLHSMFTDQQKFNQ- 7680
+ + K+ ++ G+ L++K Y A L+N F D + N
Sbjct: 2438 VEQKFKLVLQLKGFGISLIDK-----------KYEEFAYATLKNFTFR--FDDSKDLNTF 2484
Query: 7681 ------LCIEALNVDHKWAGAPFAAMLRQHQSSSSDANGCLFKCVFILVSSGSSVTQVKH 7842
L I+ +D + A F M+ Q D L +L S ++ +K+
Sbjct: 2485 GMSLGWLQIDNQMLDSVYPIALFPTMIT--QEVKQDDPQLLQLRFSVLKDSSFNILYIKY 2542
Query: 7843 SSIVLQPVNLNLDEETLMRV---------VAFWRSSLSTNTQSSQY-------------- 7953
+S++LQ ++L +++ ++ + V+ +SLS N + ++
Sbjct: 2543 ASLLLQELSLEVEDRLVLTLLQLLYPSSDVSKDSASLSKNAFADKFEIPDLDADVYRSNV 2602
Query: 7954 YFDHFEIHPIKITANFVPG--SSYSSYNSAQETLRSLLHSVVK-VPHIKNMVVELNGVLV 8124
+F+ + P ++ +F S + S+ TL + ++ + +I + V+LN +L+
Sbjct: 2603 FFETLHLQPTRLNISFETSYESDQPAVKSSNPTLDFMTGILISTLGNIHDAPVQLNSILL 2662
Query: 8125 THALITVRELLLRCVKHYSWYAMRAIYIAKG 8217
+A T+ E+ R HY IY G
Sbjct: 2663 ENARGTLSEMANRVASHYKQQVGYQIYKIAG 2693
>dbj|BAA32298.2| KIAA0453 protein [Homo sapiens]
Length = 1118
Score = 48.1 bits (113), Expect = 0.003
Identities = 27/83 (32%), Positives = 41/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 7018 GAIEFASVNVTEEGSTLAVHFQKPPNTPPPYRIENFLHSASLTYYQKDSSEIEV---LGP 7188
G F V +T G+T + F PPP+RI+NF + + Q +E + + P
Sbjct: 217 GKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNF-SKVPVVFTQHGVAEPRLRTEVKP 275
Query: 7189 GSGADYAWDDMTLPHKLVVIVDG 7257
+ DYAWD+ TLP + + V G
Sbjct: 276 MTSLDYAWDEPTLPPFITLTVKG 298
>ref|XP_044546.3| similar to KIAA0453 protein [Homo sapiens]
Length = 1231
Score = 48.1 bits (113), Expect = 0.003
Identities = 27/83 (32%), Positives = 41/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 7018 GAIEFASVNVTEEGSTLAVHFQKPPNTPPPYRIENFLHSASLTYYQKDSSEIEV---LGP 7188
G F V +T G+T + F PPP+RI+NF + + Q +E + + P
Sbjct: 330 GKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNF-SKVPVVFTQHGVAEPRLRTEVKP 388
Query: 7189 GSGADYAWDDMTLPHKLVVIVDG 7257
+ DYAWD+ TLP + + V G
Sbjct: 389 MTSLDYAWDEPTLPPFITLTVKG 411
>pir||T00067 hypothetical protein KIAA0453 - human (fragment)
Length = 1052
Score = 48.1 bits (113), Expect = 0.003
Identities = 27/83 (32%), Positives = 41/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 7018 GAIEFASVNVTEEGSTLAVHFQKPPNTPPPYRIENFLHSASLTYYQKDSSEIEV---LGP 7188
G F V +T G+T + F PPP+RI+NF + + Q +E + + P
Sbjct: 217 GKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNF-SKVPVVFTQHGVAEPRLRTEVKP 275
Query: 7189 GSGADYAWDDMTLPHKLVVIVDG 7257
+ DYAWD+ TLP + + V G
Sbjct: 276 MTSLDYAWDEPTLPPFITLTVKG 298
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 141
effective length of database: 240,383,055
effective search space used: 710091544470
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)