BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BE844938.x
(123 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM63604.1| putative anthocyanidin synthase [Arabidopsis... 85 3e-16
ref|NP_181359.1| putative anthocyanidin synthase; protein i... 85 3e-16
ref|NP_196179.1| leucoanthocyanidin dioxygenase-like protei... 60 1e-08
gb|AAM61665.1| leucoanthocyanidin dioxygenase-like protein ... 60 1e-08
ref|NP_187728.1| putative leucoanthocyanidin dioxygenase; p... 59 2e-08
>gb|AAM63604.1| putative anthocyanidin synthase [Arabidopsis thaliana]
Length = 353
Score = 85.1 bits (209), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = -2
Query: 122 GMERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFD 3
GMERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFD
Sbjct: 290 GMERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFD 329
>ref|NP_181359.1| putative anthocyanidin synthase; protein id: At2g38240.1, supported
by cDNA: 256433., supported by cDNA: gi_17065133,
supported by cDNA: gi_20259907 [Arabidopsis
thaliana]|gi|7433241|pir||T01256 probable anthocyanidin
synthase [imported] - Arabidopsis
thaliana|gi|3335372|gb|AAC27173.1| putative
anthocyanidin synthase [Arabidopsis
thaliana]|gi|17065134|gb|AAL32721.1| putative
anthocyanidin synthase [Arabidopsis
thaliana]|gi|20259908|gb|AAM13301.1| putative
anthocyanidin synthase [Arabidopsis thaliana]
Length = 353
Score = 85.1 bits (209), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = -2
Query: 122 GMERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFD 3
GMERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFD
Sbjct: 290 GMERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFD 329
>ref|NP_196179.1| leucoanthocyanidin dioxygenase-like protein; protein id:
At5g05600.1, supported by cDNA: 13012., supported by
cDNA: gi_14532537 [Arabidopsis
thaliana]|gi|10178137|dbj|BAB11549.1| leucoanthocyanidin
dioxygenase-like protein [Arabidopsis
thaliana]|gi|14532538|gb|AAK63997.1| AT5g05600/MOP10_14
[Arabidopsis thaliana]|gi|22137300|gb|AAM91495.1|
AT5g05600/MOP10_14 [Arabidopsis thaliana]
Length = 371
Score = 59.7 bits (143), Expect = 1e-08
Identities = 25/38 (65%), Positives = 32/38 (83%)
Frame = -2
Query: 116 ERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFD 3
ERVSLAFFYNP+SDIP+ P++ELV+ + P LY P+ FD
Sbjct: 310 ERVSLAFFYNPKSDIPIQPLQELVSTHNPPLYPPMTFD 347
>gb|AAM61665.1| leucoanthocyanidin dioxygenase-like protein [Arabidopsis thaliana]
Length = 355
Score = 59.7 bits (143), Expect = 1e-08
Identities = 25/38 (65%), Positives = 32/38 (83%)
Frame = -2
Query: 116 ERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFD 3
ERVSLAFFYNP+SDIP+ P++ELV+ + P LY P+ FD
Sbjct: 294 ERVSLAFFYNPKSDIPIQPLQELVSTHNPPLYPPMTFD 331
>ref|NP_187728.1| putative leucoanthocyanidin dioxygenase; protein id: At3g11180.1
[Arabidopsis
thaliana]|gi|6016680|gb|AAF01507.1|AC009991_3 putative
leucoanthocyanidin dioxygenase [Arabidopsis
thaliana]|gi|12321884|gb|AAG50980.1|AC073395_22
leucoanthocyanidin dioxygenase, putative; 41415-43854
[Arabidopsis thaliana]
Length = 400
Score = 59.3 bits (142), Expect = 2e-08
Identities = 25/38 (65%), Positives = 32/38 (83%)
Frame = -2
Query: 116 ERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFD 3
ERVSLAFFYNP+SDIP+ P+++LVT+ P LY P+ FD
Sbjct: 339 ERVSLAFFYNPKSDIPIQPMQQLVTSTMPPLYPPMTFD 376
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 16
effective length of database: 407,763,805
effective search space used: 9786331320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)