BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV545051.r
         (129 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181221.1|  putative aquaporin (tonoplast intrinsic pr...    83   1e-15
gb|AAM65100.1|  putative aquaporin (tonoplast intrinsic prot...    83   1e-15
emb|CAA51171.1|  tonoplast intrinsic protein gamma (gamma-TI...    83   1e-15
gb|AAB51394.2|  tonoplast intrinsic protein bobTIP26-2 [Bras...    82   2e-15
gb|AAN05780.1|  tonoplast intrinsic protein bobTIP26-2 [Bras...    82   2e-15

>ref|NP_181221.1| putative aquaporin (tonoplast intrinsic protein gamma); protein id:
           At2g36830.1, supported by cDNA: 36633., supported by
           cDNA: gi_13877818, supported by cDNA: gi_16323491
           [Arabidopsis thaliana]|gi|135860|sp|P25818|TIPG_ARATH
           Tonoplast intrinsic protein, gamma (Gamma TIP)
           (Aquaporin-TIP) (Tonoplast intrinsic protein,
           root-specific RB7)|gi|99761|pir||S22202 tonoplast
           intrinsic protein gamma - Arabidopsis
           thaliana|gi|16312|emb|CAA45115.1| tonoplast intrinsic
           protein, gamma-TIP(Ara). [Arabidopsis
           thaliana]|gi|166732|gb|AAA32806.1| tonoplast intrinsic
           protein|gi|4883600|gb|AAD31569.1| putative aquaporin
           (tonoplast intrinsic protein gamma) [Arabidopsis
           thaliana]|gi|13877819|gb|AAK43987.1|AF370172_1 putative
           tonoplast intrinsic protein gamma, aquaporin
           [Arabidopsis thaliana]|gi|16323492|gb|AAL15240.1|
           putative aquaporin [Arabidopsis
           thaliana]|gi|445129|prf||1908432B tonoplast intrinsic
           protein gamma
          Length = 251

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -3

Query: 127 NHWVYWAGPLVVGGIAGLIYEVFFINTTHEQLPTTDY 17
           NHWVYWAGPLV GGIAGLIYEVFFINTTHEQLPTTDY
Sbjct: 215 NHWVYWAGPLVGGGIAGLIYEVFFINTTHEQLPTTDY 251



>gb|AAM65100.1| putative aquaporin (tonoplast intrinsic protein gamma) [Arabidopsis
           thaliana]
          Length = 251

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -3

Query: 127 NHWVYWAGPLVVGGIAGLIYEVFFINTTHEQLPTTDY 17
           NHWVYWAGPLV GGIAGLIYEVFFINTTHEQLPTTDY
Sbjct: 215 NHWVYWAGPLVGGGIAGLIYEVFFINTTHEQLPTTDY 251



>emb|CAA51171.1| tonoplast intrinsic protein gamma (gamma-TIP) [Arabidopsis
           thaliana]
          Length = 251

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -3

Query: 127 NHWVYWAGPLVVGGIAGLIYEVFFINTTHEQLPTTDY 17
           NHWVYWAGPLV GGIAGLIYEVFFINTTHEQLPTTDY
Sbjct: 215 NHWVYWAGPLVGGGIAGLIYEVFFINTTHEQLPTTDY 251



>gb|AAB51394.2| tonoplast intrinsic protein bobTIP26-2 [Brassica oleracea var.
           botrytis]
          Length = 175

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 34/37 (91%), Positives = 36/37 (96%)
 Frame = -3

Query: 127 NHWVYWAGPLVVGGIAGLIYEVFFINTTHEQLPTTDY 17
           NHWVYWAGPL+ GG+AGLIYEVFFINTTHEQLPTTDY
Sbjct: 139 NHWVYWAGPLIGGGVAGLIYEVFFINTTHEQLPTTDY 175



>gb|AAN05780.1| tonoplast intrinsic protein bobTIP26-2 [Brassica oleracea var.
           botrytis]
          Length = 251

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 34/37 (91%), Positives = 36/37 (96%)
 Frame = -3

Query: 127 NHWVYWAGPLVVGGIAGLIYEVFFINTTHEQLPTTDY 17
           NHWVYWAGPL+ GG+AGLIYEVFFINTTHEQLPTTDY
Sbjct: 215 NHWVYWAGPLIGGGVAGLIYEVFFINTTHEQLPTTDY 251



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 18
effective length of database: 405,085,713
effective search space used: 9722057112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)