BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.5717.C1
(7608 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180257.1| unknown protein; protein id: At2g26890.1 [... 4586 0.0
gb|AAL67579.1|AC018929_1 putative DnaJ domain containg prot... 1544 0.0
gb|AAK00454.1|AC060755_24 unknown protein [Oryza sativa] 1522 0.0
ref|NP_492222.2| Receptor Mediated Endocytosis 8 RME-8, pro... 568 e-160
ref|XP_039828.3| similar to hypothetical protein KIAA0678 -... 565 e-159
>ref|NP_180257.1| unknown protein; protein id: At2g26890.1 [Arabidopsis
thaliana]|gi|7485402|pir||T02646 hypothetical protein
At2g26890 [imported] - Arabidopsis
thaliana|gi|3426038|gb|AAC32237.1| unknown protein
[Arabidopsis thaliana]
Length = 2535
Score = 4586 bits (11895), Expect = 0.0
Identities = 2338/2535 (92%), Positives = 2338/2535 (92%)
Frame = +1
Query: 1 MDSVSRGAVASTTGGAVEEPEYLARYLVVKHSWRGRYKRILCISSGGIVTLDPNTLAVTN 180
MDSVSRGAVASTTGGAVEEPEYLARYLVVKHSWRGRYKRILCISSGGIVTLDPNTLAVTN
Sbjct: 1 MDSVSRGAVASTTGGAVEEPEYLARYLVVKHSWRGRYKRILCISSGGIVTLDPNTLAVTN 60
Query: 181 SYDTGSNFDGASPLVGRDENTESVGGEFTVNVRTDGKGKFKAMKFSSRCRASILTELYRL 360
SYDTGSNFDGASPLVGRDENTESVGGEFTVNVRTDGKGKFKAMKFSSRCRASILTELYRL
Sbjct: 61 SYDTGSNFDGASPLVGRDENTESVGGEFTVNVRTDGKGKFKAMKFSSRCRASILTELYRL 120
Query: 361 RWNQIRPVAEFQVLHLRRRNAEWVPYKLKITFVGLELVDSKSGNSRWILDFRDMGSPAII 540
RWNQIRPVAEFQVLHLRRRNAEWVPYKLKITFVGLELVDSKSGNSRWILDFRDMGSPAII
Sbjct: 121 RWNQIRPVAEFQVLHLRRRNAEWVPYKLKITFVGLELVDSKSGNSRWILDFRDMGSPAII 180
Query: 541 LLSDAYRTKSADSAGFVLCPMYGRKSKAFRAAPGTTNSSIVASLAKTAKSMVGVFLSVDD 720
LLSDAYRTKSADSAGFVLCPMYGRKSKAFRAAPGTTNSSIVASLAKTAKSMVGVFLSVDD
Sbjct: 181 LLSDAYRTKSADSAGFVLCPMYGRKSKAFRAAPGTTNSSIVASLAKTAKSMVGVFLSVDD 240
Query: 721 SQLLTVSEYMTRRAKEAVGAEETPNGWWSVTRLRSAAHGTLNMPGLSLAIGPKGGLGEHG 900
SQLLTVSEYMTRRAKEAVGAEETPNGWWSVTRLRSAAHGTLNMPGLSLAIGPKGGLGEHG
Sbjct: 241 SQLLTVSEYMTRRAKEAVGAEETPNGWWSVTRLRSAAHGTLNMPGLSLAIGPKGGLGEHG 300
Query: 901 DAVALQLILTKASLVERRIDNYEXXXXXXXXXXXXXXXFAEEPQMFAIEFSDGCPVLGHC 1080
DAVALQLILTKASLVERRIDNYE FAEEPQMFAIEFSDGCPVLGHC
Sbjct: 301 DAVALQLILTKASLVERRIDNYEVVIVRPLSSVSSLVRFAEEPQMFAIEFSDGCPVLGHC 360
Query: 1081 PIPVLPRLTMPGHRIDPPCGRVSLISGPQHLVADLETCSXXXXXXXXXXXXXXXEGGSVP 1260
PIPVLPRLTMPGHRIDPPCGRVSLISGPQHLVADLETCS EGGSVP
Sbjct: 361 PIPVLPRLTMPGHRIDPPCGRVSLISGPQHLVADLETCSLHLKHLAAAAKDAVAEGGSVP 420
Query: 1261 GCRARLWRRIREFNACIPYTGVPANSEVPEVTLMALITMLPSTXXXXXXXXXXXXXXXXX 1440
GCRARLWRRIREFNACIPYTGVPANSEVPEVTLMALITMLPST
Sbjct: 421 GCRARLWRRIREFNACIPYTGVPANSEVPEVTLMALITMLPSTPNLPVDAPPLPPPSPKA 480
Query: 1441 XXTVIGFVTCXXXXXXXXXAASHIMSFPAAVNRIMGLLRNGSEGVAAEAAGLIASLIGGW 1620
TVIGFVTC AASHIMSFPAAVNRIMGLLRNGSEGVAAEAAGLIASLIGGW
Sbjct: 481 AATVIGFVTCLRRLLSSRSAASHIMSFPAAVNRIMGLLRNGSEGVAAEAAGLIASLIGGW 540
Query: 1621 SADLSTAPDSRGEKHATIMHTKSVLFAQQGYVTILVNRLKPMSVSPLFSMAIVEVFEAMV 1800
SADLSTAPDSRGEKHATIMHTKSVLFAQQGYVTILVNRLKPMSVSPLFSMAIVEVFEAMV
Sbjct: 541 SADLSTAPDSRGEKHATIMHTKSVLFAQQGYVTILVNRLKPMSVSPLFSMAIVEVFEAMV 600
Query: 1801 CDPHGETTQYTVFVEXXXXXXXXXXXXXXXXXHPAESVRETIAVIMRTIAEEDAIAAESM 1980
CDPHGETTQYTVFVE HPAESVRETIAVIMRTIAEEDAIAAESM
Sbjct: 601 CDPHGETTQYTVFVELLRQIAALRRRLFALFAHPAESVRETIAVIMRTIAEEDAIAAESM 660
Query: 1981 RDAALRDGALLRHLLNAFSLPASERREVSRQLVALWADSYQPALDLLSRVLPPGLVAYLH 2160
RDAALRDGALLRHLLNAFSLPASERREVSRQLVALWADSYQPALDLLSRVLPPGLVAYLH
Sbjct: 661 RDAALRDGALLRHLLNAFSLPASERREVSRQLVALWADSYQPALDLLSRVLPPGLVAYLH 720
Query: 2161 TRPDDVVDDTDQEGSSTNXXXXXXXXXXXXXIAKGMGAQDIPLPPGNNVEAGDAAKHMSA 2340
TRPDDVVDDTDQEGSSTN IAKGMGAQDIPLPPGNNVEAGDAAKHMSA
Sbjct: 721 TRPDDVVDDTDQEGSSTNRRQKRLLQQRRGRIAKGMGAQDIPLPPGNNVEAGDAAKHMSA 780
Query: 2341 NASVPDNFQRRAADSSSEASNPQASAFPGVDSTIAGVSQNGYPAFASVTTNANGHEQPET 2520
NASVPDNFQRRAADSSSEASNPQASAFPGVDSTIAGVSQNGYPAFASVTTNANGHEQPET
Sbjct: 781 NASVPDNFQRRAADSSSEASNPQASAFPGVDSTIAGVSQNGYPAFASVTTNANGHEQPET 840
Query: 2521 NASDVVGSDPNLYGIQNSVLPAPAQVIVESTAVGSGKLLLNWREFWRAFGLDHNRADLIW 2700
NASDVVGSDPNLYGIQNSVLPAPAQVIVESTAVGSGKLLLNWREFWRAFGLDHNRADLIW
Sbjct: 841 NASDVVGSDPNLYGIQNSVLPAPAQVIVESTAVGSGKLLLNWREFWRAFGLDHNRADLIW 900
Query: 2701 NERTRQELIEALKAEVHNLDVEKERTEDISPGDVEATTGQEIIPRISWNYSEFSVSYRSL 2880
NERTRQELIEALKAEVHNLDVEKERTEDISPGDVEATTGQEIIPRISWNYSEFSVSYRSL
Sbjct: 901 NERTRQELIEALKAEVHNLDVEKERTEDISPGDVEATTGQEIIPRISWNYSEFSVSYRSL 960
Query: 2881 SKEVCVGQYYLRLLLESGNAGKAQDFPLRDPVAFFRALYHRFQCDADMGLTIDGAVPDEL 3060
SKEVCVGQYYLRLLLESGNAGKAQDFPLRDPVAFFRALYHRFQCDADMGLTIDGAVPDEL
Sbjct: 961 SKEVCVGQYYLRLLLESGNAGKAQDFPLRDPVAFFRALYHRFQCDADMGLTIDGAVPDEL 1020
Query: 3061 GSSGDWCDMSRLDGFGGGGGASVRELCARAMAIVYEQHYNTIGPFEGTAHITALIDRTND 3240
GSSGDWCDMSRLDGFGGGGGASVRELCARAMAIVYEQHYNTIGPFEGTAHITALIDRTND
Sbjct: 1021 GSSGDWCDMSRLDGFGGGGGASVRELCARAMAIVYEQHYNTIGPFEGTAHITALIDRTND 1080
Query: 3241 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVHENSERTPIPLQSNLIAATA 3420
R TVVHENSERTPIPLQSNLIAATA
Sbjct: 1081 RALRHRLLLLLKALVKVLLNVEGCVVVGGCVLAVDLLTVVHENSERTPIPLQSNLIAATA 1140
Query: 3421 FMEPPKEWMYIDKGGAEVGPVEKDVIRSLWSKKDIDWTTKCRALGMSDWKKLRDIRELRW 3600
FMEPPKEWMYIDKGGAEVGPVEKDVIRSLWSKKDIDWTTKCRALGMSDWKKLRDIRELRW
Sbjct: 1141 FMEPPKEWMYIDKGGAEVGPVEKDVIRSLWSKKDIDWTTKCRALGMSDWKKLRDIRELRW 1200
Query: 3601 AVAVRVPVLTPSQVGDAALSILHSMVSAHSDLDDAGEIVTPTPRVKRILSSTRCLPHIAQ 3780
AVAVRVPVLTPSQVGDAALSILHSMVSAHSDLDDAGEIVTPTPRVKRILSSTRCLPHIAQ
Sbjct: 1201 AVAVRVPVLTPSQVGDAALSILHSMVSAHSDLDDAGEIVTPTPRVKRILSSTRCLPHIAQ 1260
Query: 3781 ALLSGEPVIVEAGAALLKDVVTRNSKAMIRLYSTGAFYFALAYPGSNLYSIAQLFSVTHV 3960
ALLSGEPVIVEAGAALLKDVVTRNSKAMIRLYSTGAFYFALAYPGSNLYSIAQLFSVTHV
Sbjct: 1261 ALLSGEPVIVEAGAALLKDVVTRNSKAMIRLYSTGAFYFALAYPGSNLYSIAQLFSVTHV 1320
Query: 3961 HQAFHGGEEATVSSSLPLAKRSVLGGLLPESLLYVLERSGPAAFAAGMVSDSDTPEIIWT 4140
HQAFHGGEEATVSSSLPLAKRSVLGGLLPESLLYVLERSGPAAFAAGMVSDSDTPEIIWT
Sbjct: 1321 HQAFHGGEEATVSSSLPLAKRSVLGGLLPESLLYVLERSGPAAFAAGMVSDSDTPEIIWT 1380
Query: 4141 HKMRAENLICQVLQHLGDYPQKLSQHCHSLYDYAPMPPVTYPELRDEMWCHRYYLRNLCD 4320
HKMRAENLICQVLQHLGDYPQKLSQHCHSLYDYAPMPPVTYPELRDEMWCHRYYLRNLCD
Sbjct: 1381 HKMRAENLICQVLQHLGDYPQKLSQHCHSLYDYAPMPPVTYPELRDEMWCHRYYLRNLCD 1440
Query: 4321 EIQFPNWPIVEHVEFLQSLLVMWREELTRKPMDLSEGEACKILEISLNNVSSDDLNRTAS 4500
EIQFPNWPIVEHVEFLQSLLVMWREELTRKPMDLSEGEACKILEISLNNVSSDDLNRTAS
Sbjct: 1441 EIQFPNWPIVEHVEFLQSLLVMWREELTRKPMDLSEGEACKILEISLNNVSSDDLNRTAS 1500
Query: 4501 VELNEEISNISKQIQNLDEEKLKRQYRKLAMRYHPDKNPEGREKFLAVQKAYECLQATMQ 4680
VELNEEISNISKQIQNLDEEKLKRQYRKLAMRYHPDKNPEGREKFLAVQKAYECLQATMQ
Sbjct: 1501 VELNEEISNISKQIQNLDEEKLKRQYRKLAMRYHPDKNPEGREKFLAVQKAYECLQATMQ 1560
Query: 4681 GLQGPQPWRLLLLLKAQCILYRRYGHVLRPFKYAGYPMLLDAVTVDKDDNNFLSNDRSPL 4860
GLQGPQPWRLLLLLKAQCILYRRYGHVLRPFKYAGYPMLLDAVTVDKDDNNFLSNDRSPL
Sbjct: 1561 GLQGPQPWRLLLLLKAQCILYRRYGHVLRPFKYAGYPMLLDAVTVDKDDNNFLSNDRSPL 1620
Query: 4861 LVAASELVSLTCAASSLNGEELVRDGGVQLLSTLLSRCMCVVQPTTSQHEPAAIIVTNVM 5040
LVAASELVSLTCAASSLNGEELVRDGGVQLLSTLLSRCMCVVQPTTSQHEPAAIIVTNVM
Sbjct: 1621 LVAASELVSLTCAASSLNGEELVRDGGVQLLSTLLSRCMCVVQPTTSQHEPAAIIVTNVM 1680
Query: 5041 RTLSVISQFESARAGFLELPSLIEDIVHCTELERVPAAVDAALQSIAKVSVFPELQHGLL 5220
RTLSVISQFESARAGFLELPSLIEDIVHCTELERVPAAVDAALQSIAKVSVFPELQHGLL
Sbjct: 1681 RTLSVISQFESARAGFLELPSLIEDIVHCTELERVPAAVDAALQSIAKVSVFPELQHGLL 1740
Query: 5221 KAGALWYILPLLLQYDSTAEESNSVESHGVGVSIQIAKNEHALQASQALSRLTGLCADES 5400
KAGALWYILPLLLQYDSTAEESNSVESHGVGVSIQIAKNEHALQASQALSRLTGLCADES
Sbjct: 1741 KAGALWYILPLLLQYDSTAEESNSVESHGVGVSIQIAKNEHALQASQALSRLTGLCADES 1800
Query: 5401 LTPYNATAADVLKALLTPKLASLLKDEVAKDLLSKLNTNLETPEIIWNSATRSELLNFVD 5580
LTPYNATAADVLKALLTPKLASLLKDEVAKDLLSKLNTNLETPEIIWNSATRSELLNFVD
Sbjct: 1801 LTPYNATAADVLKALLTPKLASLLKDEVAKDLLSKLNTNLETPEIIWNSATRSELLNFVD 1860
Query: 5581 EQRACQCPDGSYDLKNAQSFSYDALSKEVFVGNVYLKVYNDQPDSEISEPESFCNALIDF 5760
EQRACQCPDGSYDLKNAQSFSYDALSKEVFVGNVYLKVYNDQPDSEISEPESFCNALIDF
Sbjct: 1861 EQRACQCPDGSYDLKNAQSFSYDALSKEVFVGNVYLKVYNDQPDSEISEPESFCNALIDF 1920
Query: 5761 ISSLVHTELPSVSEDQNLIEDRNSSNDTPELQSSVAEPSLIEEHSDHQPSSEGMKNEECF 5940
ISSLVHTELPSVSEDQNLIEDRNSSNDTPELQSSVAEPSLIEEHSDHQPSSEGMKNEECF
Sbjct: 1921 ISSLVHTELPSVSEDQNLIEDRNSSNDTPELQSSVAEPSLIEEHSDHQPSSEGMKNEECF 1980
Query: 5941 LIDHXXXXXXXXXXXXXKYPDLASVFSSKERLLPLFECFSVAIASKTDIPKLCLNVLSRL 6120
LIDH KYPDLASVFSSKERLLPLFECFSVAIASKTDIPKLCLNVLSRL
Sbjct: 1981 LIDHLQLGLTALQNLLTKYPDLASVFSSKERLLPLFECFSVAIASKTDIPKLCLNVLSRL 2040
Query: 6121 TAYAPCLETMVXXXXXXXXXXXXXXXXXXFREGALHVLYALASTPELAWAAAKHEEIPLQ 6300
TAYAPCLETMV FREGALHVLYALASTPELAWAAAKHEEIPLQ
Sbjct: 2041 TAYAPCLETMVSDGSSLLLLLQMLHSAPSFREGALHVLYALASTPELAWAAAKHEEIPLQ 2100
Query: 6301 QRAAAASLLGKLVAQPMHGPRVAITLVRFLPDGLVSIIRDGPGEAVVHALERTTETPELV 6480
QRAAAASLLGKLVAQPMHGPRVAITLVRFLPDGLVSIIRDGPGEAVVHALERTTETPELV
Sbjct: 2101 QRAAAASLLGKLVAQPMHGPRVAITLVRFLPDGLVSIIRDGPGEAVVHALERTTETPELV 2160
Query: 6481 WTPAMAASLSAQIATMASDIYREQQKGSVIEWDVPEQSAGQQEMRDEPQVGGIYVRRFLK 6660
WTPAMAASLSAQIATMASDIYREQQKGSVIEWDVPEQSAGQQEMRDEPQVGGIYVRRFLK
Sbjct: 2161 WTPAMAASLSAQIATMASDIYREQQKGSVIEWDVPEQSAGQQEMRDEPQVGGIYVRRFLK 2220
Query: 6661 DPKFPLRNPKRFLEGLLDQYLSAMAATHYEQHPVDPEXXXXXXXXXXXXXRVHPALADHI 6840
DPKFPLRNPKRFLEGLLDQYLSAMAATHYEQHPVDPE RVHPALADHI
Sbjct: 2221 DPKFPLRNPKRFLEGLLDQYLSAMAATHYEQHPVDPELPLLLSAALVSLLRVHPALADHI 2280
Query: 6841 GHLGYVPKLVAAVAYEGRRETMSSGEVKAEEIGSDGVNESTDPSSLPGQTPQERVRLSCL 7020
GHLGYVPKLVAAVAYEGRRETMSSGEVKAEEIGSDGVNESTDPSSLPGQTPQERVRLSCL
Sbjct: 2281 GHLGYVPKLVAAVAYEGRRETMSSGEVKAEEIGSDGVNESTDPSSLPGQTPQERVRLSCL 2340
Query: 7021 RVLHQLXXXXXXXXXXXXXXXGNAQVVPLLMKAIGWLGGSILALETLKRVVVAGNRARDA 7200
RVLHQL GNAQVVPLLMKAIGWLGGSILALETLKRVVVAGNRARDA
Sbjct: 2341 RVLHQLAASTTCAEAMAATSAGNAQVVPLLMKAIGWLGGSILALETLKRVVVAGNRARDA 2400
Query: 7201 LVAQGLKVGLIEVLLGLLDWRTGGRYGLSSHMKWNESEASIGRVLAXXXXXXXXXXXXXX 7380
LVAQGLKVGLIEVLLGLLDWRTGGRYGLSSHMKWNESEASIGRVLA
Sbjct: 2401 LVAQGLKVGLIEVLLGLLDWRTGGRYGLSSHMKWNESEASIGRVLAVEVSVEFVSEMFVM 2460
Query: 7381 CVTHVLHGFATEGAHCSKVREILDASEVWSAYKDQKHDLFLPSNTQSAAGVAGFIENSSN 7560
CVTHVLHGFATEGAHCSKVREILDASEVWSAYKDQKHDLFLPSNTQSAAGVAGFIENSSN
Sbjct: 2461 CVTHVLHGFATEGAHCSKVREILDASEVWSAYKDQKHDLFLPSNTQSAAGVAGFIENSSN 2520
Query: 7561 SLTYALTAPPPPSHP 7605
SLTYALTAPPPPSHP
Sbjct: 2521 SLTYALTAPPPPSHP 2535
>gb|AAL67579.1|AC018929_1 putative DnaJ domain containg protein, 3'-partial [Oryza sativa]
Length = 1630
Score = 1544 bits (3997), Expect = 0.0
Identities = 816/1247 (65%), Positives = 914/1247 (72%), Gaps = 29/1247 (2%)
Frame = +1
Query: 1015 FAEEPQMFAIEFSDGCPV---------------------LGHCPIPVLPRLTMPGHRIDP 1131
FAEEPQMFA EF+DGCP+ C IPVLPRLTMPGHRIDP
Sbjct: 398 FAEEPQMFAFEFNDGCPIHVYASTSRDSLLATVLDVLQNQSQCAIPVLPRLTMPGHRIDP 457
Query: 1132 PCGRVSLISGPQHLVADLETCSXXXXXXXXXXXXXXXEGGSVPGCRARLWRRIREFNACI 1311
PCG V+ + H V D+E S +VPG + RLWRRIREFNACI
Sbjct: 458 PCG-VARVHISHHTV-DMEAASMHIKHLATVAKEAVVSSDTVPGAKIRLWRRIREFNACI 515
Query: 1312 PYTGVPANSEVPEVTLMALITMLPSTXXXXXXXXXXXXXXX-XXXXTVIGFVTCXXXXXX 1488
PYTGVP N EVPEV LMALI++LP+T T++GFV C
Sbjct: 516 PYTGVPVNIEVPEVVLMALISLLPATPQNLPADAPPLPPPSPKAAATIMGFVACLRRLLT 575
Query: 1489 XXXAASHIMSFPAAVNRIMGLLRNGSEGVAAEAAGLIASLIGGWSADLSTAPDSRGEKHA 1668
++H+M+FP AV RIMGLLRNGSEGVAAEAAGL+A LIGG D S D+RGE HA
Sbjct: 576 SRSVSAHVMAFPVAVGRIMGLLRNGSEGVAAEAAGLVAMLIGGGPGDTSMLTDTRGESHA 635
Query: 1669 TIMHTKSVLFAQQGYVTILVNRLKPMSVSPLFSMAIVEVFEAMVCDPHGETTQYTVFVEX 1848
T MH KSVLF+Q YV ILVNRL+P+SVSPL S++IVEV EAM+C+PHGETTQ+ FVE
Sbjct: 636 TYMHAKSVLFSQPVYVPILVNRLRPLSVSPLLSLSIVEVLEAMLCEPHGETTQHATFVEL 695
Query: 1849 XXXXXXXXXXXXXXXXHPAESVRETIAVIMRTIAEEDAIAAESMRDAALRDGALLRHLLN 2028
HPAESVRET++VIMRTIAEEDAIAAESMRDAAL+DGALLRHLLN
Sbjct: 696 LRQVAGLRRRLFALFAHPAESVRETVSVIMRTIAEEDAIAAESMRDAALKDGALLRHLLN 755
Query: 2029 AFSLPASERREVSRQLVALWADSYQPALDLLSRVLPPGLVAYLHTRPDDVVDDTDQEGSS 2208
AF PA ERR+VSRQLVALWADSYQPALDLLSR+LPPGLVAYLHTR D+ + E
Sbjct: 756 AFFYPAGERRDVSRQLVALWADSYQPALDLLSRILPPGLVAYLHTRSDEDSQNQYDEVPL 815
Query: 2209 TNXXXXXXXXXXXXXIAKGMGAQDIPLPPGNNVEAGDAAKHMSANASVPDNFQRRAADSS 2388
+ K M + +P NN GD H + D QR A +
Sbjct: 816 SRRQKRILQQRRSRG-GKSMAVPEQGMPSNNN--EGDFFGHTNVGPFGADVHQRHA-NQY 871
Query: 2389 SEASNPQASAFPGVDSTIAGVSQNGYPAFASVTTN-ANGHEQPETNASDVVGSDPN--LY 2559
A P PG+ + +G+ A N G Q +++A +V S+ N L
Sbjct: 872 PTAYTPS----PGISIDPSQAVPHGFVPEAFYENNHQTGAPQLDSHAY-LVDSNGNGDLA 926
Query: 2560 GIQNSVLPAPAQVIVESTAVGSGKLLLNWREFWRAFGLDHNRADLIWNERTRQELIEALK 2739
+ PAQV+VE+T VGSG+LL NW FWRAF LDHNRADLIWNERTRQEL EAL+
Sbjct: 927 NSAHLDFSVPAQVVVENTPVGSGRLLCNWYGFWRAFSLDHNRADLIWNERTRQELREALQ 986
Query: 2740 AEVHNLDVEKERTEDISPGD--VEATTGQEIIPRISWNYSEFSVSYRSLSKEVCVGQYYL 2913
AEVH+LDVEKERT+DI PG E + E +PRISWNY EFSVSY SLSKEVCVGQYYL
Sbjct: 987 AEVHSLDVEKERTDDIVPGSSVTEDASDSETLPRISWNYVEFSVSYPSLSKEVCVGQYYL 1046
Query: 2914 RLLLESGNAGKAQDFPLRDPVAFFRALYHRFQCDADMGLTIDGAVPDELGSSGDWCDMSR 3093
RLLLESG+ +AQDFPLRDPVAFFRALYHRF CDAD+GLT+DGAVPDELGSS DWCD+ R
Sbjct: 1047 RLLLESGSNYRAQDFPLRDPVAFFRALYHRFLCDADIGLTVDGAVPDELGSSDDWCDLGR 1106
Query: 3094 LDGFGGGGGASVRELCARAMAIVYEQHYNTIGPFEGTAHITALIDRTNDRXXXXXXXXXX 3273
LDGFGGGGG+SVRELC+RAMAIVYEQH IGPF+GTAHIT L+DRT+DR
Sbjct: 1107 LDGFGGGGGSSVRELCSRAMAIVYEQHNKVIGPFDGTAHITVLLDRTDDRALRHRLLLLL 1166
Query: 3274 XXXXXXXXXXXXXXXXXXXXXXXXXXTVVHENSERTPIPLQSNLIAATAFMEPPKEWMYI 3453
TV HE SERT IPLQSNLIAATAFMEP KEWMYI
Sbjct: 1167 KALMNDLSNVEVCVLVGGCVLAVDMLTVAHEASERTAIPLQSNLIAATAFMEPLKEWMYI 1226
Query: 3454 DKGGAEVGPVEKDVIRSLWSKKDIDWTTKCRALGMSDWKKLRDIRELRWAVAVRVPVLTP 3633
DK G +VGP+EKD IR LWSKK IDWTTKC A GMSDWK+LRDIRELRWA+AV+VPVLTP
Sbjct: 1227 DKDGKQVGPLEKDAIRRLWSKKSIDWTTKCWASGMSDWKRLRDIRELRWALAVKVPVLTP 1286
Query: 3634 SQVGDAALSILHSMVSAHSDLDDAGEIVTPTPRVKRILSSTRCLPHIAQALLSGEPVIVE 3813
SQ+GDAALSILHSM SAHSDLDDAGEIVTPTPRVKRILSS RCLPH+AQA+L+GEP IVE
Sbjct: 1287 SQIGDAALSILHSMASAHSDLDDAGEIVTPTPRVKRILSSPRCLPHVAQAMLTGEPSIVE 1346
Query: 3814 AGAALLKDVVTRNSKAMIRLYSTGAFYFALAYPGSNLYSIAQLFSVTHVHQAFHGGEEAT 3993
A A+LLK +VTRN KAMIRLYSTGAFYFALAYPGSNL SIAQLFS TH HQAFHGGEEA
Sbjct: 1347 AAASLLKAIVTRNPKAMIRLYSTGAFYFALAYPGSNLLSIAQLFSATHTHQAFHGGEEAA 1406
Query: 3994 VSSSLPLAKRSVLGGLLPESLLYVLERSGPAAFAAGMVSDSDTPEIIWTHKMRAENLICQ 4173
VSSSLPLAKRSVLGGLLPESLLYVLERSGP+AFAA MVSDSDTPEIIWTHKMRAE+LI Q
Sbjct: 1407 VSSSLPLAKRSVLGGLLPESLLYVLERSGPSAFAAAMVSDSDTPEIIWTHKMRAEHLIRQ 1466
Query: 4174 VLQHLGDYPQKLSQHCHSLYDYAPMPPVTYPELRDEMWCHRYYLRNLCDEIQFPNWPIVE 4353
VLQHLGD+PQKL+QHCHSLYDYAPMPPVTYP L+DEMWCHRYYLRNLCDEI+FPNWPIVE
Sbjct: 1467 VLQHLGDFPQKLAQHCHSLYDYAPMPPVTYPNLKDEMWCHRYYLRNLCDEIRFPNWPIVE 1526
Query: 4354 HVEFLQSLLVMWREELTRKPMDLSEGEACKILEISLNNVSSDDLNRTASVELNEEIS--N 4527
HVEFLQSLL MWREELTR+PMDLSE +ACKILEISL+++ L S + + E+S N
Sbjct: 1527 HVEFLQSLLAMWREELTRRPMDLSEEDACKILEISLDDLV---LGENGSSKQSSELSSGN 1583
Query: 4528 ISKQIQNLDEEKLKRQYRKLAMRYHPDKNPEGREKFLAVQKAYECLQ 4668
++ I+N+DEEKLKRQYRKLA++YHPDKNPEGREKF+AVQKAYE LQ
Sbjct: 1584 LTNNIENIDEEKLKRQYRKLAIKYHPDKNPEGREKFVAVQKAYERLQ 1630
Score = 391 bits (1005), Expect = e-107
Identities = 196/316 (62%), Positives = 243/316 (76%)
Frame = +1
Query: 22 AVASTTGGAVEEPEYLARYLVVKHSWRGRYKRILCISSGGIVTLDPNTLAVTNSYDTGSN 201
+ +S++ A EEPEYLARY VVKHSWRGRY+RILCI+S G+VTLDP TLAVTNSYD
Sbjct: 28 SASSSSSAAAEEPEYLARYFVVKHSWRGRYRRILCIASSGLVTLDPATLAVTNSYDASYG 87
Query: 202 FDGASPLVGRDENTESVGGEFTVNVRTDGKGKFKAMKFSSRCRASILTELYRLRWNQIRP 381
FD A+P E EFT+ +RTD +GKFKA++FSS RA ILTEL+RLR + P
Sbjct: 88 FDRAAP--------EGNATEFTLTLRTDARGKFKALRFSSPLRAGILTELHRLR--PVHP 137
Query: 382 VAEFQVLHLRRRNAEWVPYKLKITFVGLELVDSKSGNSRWILDFRDMGSPAIILLSDAYR 561
V +F VLHLRRR EW P+KLK+T VG+EL++ SG+ RW LDFRDM SPAIILL D+Y
Sbjct: 138 VLDFPVLHLRRRTHEWAPFKLKVTSVGIELLEGHSGDLRWCLDFRDMDSPAIILLGDSYG 197
Query: 562 TKSADSAGFVLCPMYGRKSKAFRAAPGTTNSSIVASLAKTAKSMVGVFLSVDDSQLLTVS 741
++A+ GFVLCP+YGRKSKAF AA G+TN+ I++ L KTA SMVGV L VD+SQ +T +
Sbjct: 198 KRTAEGGGFVLCPLYGRKSKAFMAASGSTNTLIISYLTKTANSMVGVSLHVDNSQSMTAT 257
Query: 742 EYMTRRAKEAVGAEETPNGWWSVTRLRSAAHGTLNMPGLSLAIGPKGGLGEHGDAVALQL 921
+++ +RA EAVGA ET +G WSVTRLR AAHGT ++ LSL IGP+GGLG+HGD+V+ QL
Sbjct: 258 DFIAKRANEAVGAAETRHGEWSVTRLRPAAHGTASIESLSLGIGPRGGLGDHGDSVSRQL 317
Query: 922 ILTKASLVERRIDNYE 969
+LT SLVERR +NYE
Sbjct: 318 VLTNTSLVERRPENYE 333
>gb|AAK00454.1|AC060755_24 unknown protein [Oryza sativa]
Length = 1190
Score = 1522 bits (3941), Expect = 0.0
Identities = 785/1183 (66%), Positives = 923/1183 (77%), Gaps = 19/1183 (1%)
Frame = +1
Query: 4102 MVSDSDTPEIIWTHKMRAENLICQVLQHLGDYPQKLSQHCHSLYDYAPMPPVTYPELRDE 4281
MVSDSDTPEIIWTHKMRAE+LI QVLQHLGD+PQKL+QHCHSLYDYAPMPPVTYP L+DE
Sbjct: 1 MVSDSDTPEIIWTHKMRAEHLIRQVLQHLGDFPQKLAQHCHSLYDYAPMPPVTYPNLKDE 60
Query: 4282 MWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTRKPMDLSEGEACKILEISL 4461
MWCHRYYLRNLCDEI+FPNWPIVEHVEFLQSLL MWREELTR+PMDLSE +ACKILEISL
Sbjct: 61 MWCHRYYLRNLCDEIRFPNWPIVEHVEFLQSLLAMWREELTRRPMDLSEEDACKILEISL 120
Query: 4462 NNVSSDDLNRTASVELNEEIS--NISKQIQNLDEEKLKRQYRKLAMRYHPDKNPEGREKF 4635
+++ L S + + E+S N++ I+N+DEEKLKRQYRKLA++YHPDKNPEGREKF
Sbjct: 121 DDLV---LGENGSSKQSSELSSGNLTNNIENIDEEKLKRQYRKLAIKYHPDKNPEGREKF 177
Query: 4636 LAVQKAYECLQATMQGLQGPQPWRLLLLLKAQCILYRRYGHVLRPFKYAGYPMLLDAVTV 4815
+AVQKAYE LQA+MQGLQGPQ WRLLLLL+AQCILY+RYGHVL PFKYAGYPMLL+AVTV
Sbjct: 178 VAVQKAYERLQASMQGLQGPQVWRLLLLLRAQCILYKRYGHVLEPFKYAGYPMLLNAVTV 237
Query: 4816 DKDDNNFLSNDRSPLLVAASELVSLTCAASSLNGEELVRDGGVQLLSTLLSRCMCVVQPT 4995
DKDD+NFLS++R+PLL+AASEL+ LTCA+SSLNGEEL+RDGG+ LL+TLLSRCMC+VQPT
Sbjct: 238 DKDDSNFLSSERAPLLIAASELIWLTCASSSLNGEELIRDGGIPLLATLLSRCMCIVQPT 297
Query: 4996 TSQHEPAAIIVTNVMRTLSVISQFESARAGFLELPSLIEDIVHCTELERVPAAVDAALQS 5175
T +EPAA IVTN+M T +V+SQFES RA L+ L+EDIVH TELE VP+AVDAALQ+
Sbjct: 298 TPANEPAARIVTNIMHTFAVLSQFESGRAEILKFGGLVEDIVHSTELEFVPSAVDAALQT 357
Query: 5176 IAKVSVFPELQHGLLKAGALWYILPLLLQYDSTAEESNSVESHGVGVSIQIAKNEHALQA 5355
A +SV ELQ LL AG LWY+LPLLLQYDSTAEE+ + E+HGVG +QIAKN HA+ A
Sbjct: 358 AANISVSSELQSSLLAAGFLWYVLPLLLQYDSTAEENATSEAHGVGARVQIAKNLHAVHA 417
Query: 5356 SQALSRLTGLCADESLTPYNATAADVLKALLTPKLASLLKDEVAKDLLSKLNTNLETPEI 5535
+QALSRL GL D ++P N +A D L+ALLTPKLA +L++ K+LLS LN NLE+PEI
Sbjct: 418 TQALSRLCGLGGD-GISPSNQSAFDALRALLTPKLADMLRNHPPKELLSNLNANLESPEI 476
Query: 5536 IWNSATRSELLNFVDEQRACQCPDGSYDLKNAQSFSYDALSKEVFVGNVYLKVYNDQPDS 5715
IWNS+TR ELL FVD+QRA Q PDGSYDL + F+Y ALSKE+ VGNVYL+VYN+QPD
Sbjct: 477 IWNSSTRGELLKFVDQQRASQGPDGSYDLTESHCFTYQALSKELNVGNVYLRVYNNQPDY 536
Query: 5716 EISEPESFCNALIDFISSLVHTELPSVSEDQNLIEDRNSSNDTPELQSSVAEPSLIE--E 5889
EIS+ E FC AL+ FI+ LV + S+S D+N++ ++ +T ++ S E E
Sbjct: 537 EISDQEGFCIALLKFIAELVQ-KWNSLSLDENMMHQCGTAIETSVTENGDISGSTNEGKE 595
Query: 5890 HSDHQPSSEGMKNEECFLIDHXXXXXXXXXXXXXKYPDLASVFSSKERLLPLFECFSVAI 6069
+ + G+ + + +I + P LA+VF+SKERL PLFEC ++ +
Sbjct: 596 EDSLEKHNRGVTDGDSEVIMNLRSGLTSLQNLLTSNPGLAAVFASKERLTPLFECLALPV 655
Query: 6070 ASKTDIPKLCLNVLSRLTAYAPCLETMVXXXXXXXXXXXXXXXXXXFREGALHVLYALAS 6249
+++IP++CL+VLS LT +APCLE MV R+GAL VLY+LAS
Sbjct: 656 PPESNIPQICLSVLSLLTKHAPCLEAMVAERTSLILLFQILHCNRSCRDGALTVLYSLAS 715
Query: 6250 TPELAWAAAKH--------------EEIPLQQRAAAASLLGKLVAQPMHGPRVAITLVRF 6387
TPELAWAAAKH EEIP+QQRAAAASLLGKLV QPMHGPRVAITL RF
Sbjct: 716 TPELAWAAAKHGGVVYILELMLPLEEEIPMQQRAAAASLLGKLVGQPMHGPRVAITLARF 775
Query: 6388 LPDGLVSIIRDGPGEAVVHALERTTETPELVWTPAMAASLSAQIATMASDIYREQQKGSV 6567
LPDGLVS IRDGPGEAVV LE+TTETPELVWTPAMAASLSAQ++TMA+D+Y+EQ KG V
Sbjct: 776 LPDGLVSAIRDGPGEAVVSCLEQTTETPELVWTPAMAASLSAQLSTMATDLYQEQMKGRV 835
Query: 6568 IEWDVPEQSAGQQEMRDEPQVGGIYVRRFLKDPKFPLRNPKRFLEGLLDQYLSAMAATHY 6747
++WDVPEQ++GQ M+DEPQVGGIYVR FLKDPKFPLRNPKRFLEGLLDQY+S++AATHY
Sbjct: 836 VDWDVPEQASGQHVMKDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYVSSVAATHY 895
Query: 6748 EQHPVDPEXXXXXXXXXXXXXRVHPALADHIGHLGYVPKLVAAVAYEGRRETMSSGEVKA 6927
E + VDPE RVHPALADH+G+LGYVPKLV+A+AYEGRR+TM+SG+ +
Sbjct: 896 EANAVDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVSAMAYEGRRDTMASGQTTS 955
Query: 6928 EEIGSDGVNESTDPSSLPGQTPQERVRLSCLRVLHQLXXXXXXXXXXXXXXXGNAQVVPL 7107
E++ S++ QTPQERVRLSCLRVLHQL G QVVPL
Sbjct: 956 RLQAEPSNQENSADSTV--QTPQERVRLSCLRVLHQLASSTTCAEAMAATSAGTPQVVPL 1013
Query: 7108 LMKAIGWLGGSILALETLKRVVVAGNRARDALVAQGLKVGLIEVLLGLLDWRTGGRYGLS 7287
LMKAIGW GGSILALETLKRVV AGNRARDALVAQGLKVGL+EVLLG+LDWR GGR GL
Sbjct: 1014 LMKAIGWQGGSILALETLKRVVGAGNRARDALVAQGLKVGLVEVLLGILDWRAGGRQGLC 1073
Query: 7288 SHMKWNESEASIGRVLAXXXXXXXXXXXXXXCVTHVLHGFATEGAHCSKVREILDASEVW 7467
+ MKWNESEASIGRVLA VLH FATEGAHC+KVREIL++S+VW
Sbjct: 1074 NQMKWNESEASIGRVLA----------------VEVLHAFATEGAHCAKVREILNSSDVW 1117
Query: 7468 SAYKDQKHDLFLPSNTQ-SAAGVAGFIENSSNSLTYALTAPPP 7593
SAYKDQKHDLFLPSN Q SAAGVAG IE+SS+ LTYALTAPPP
Sbjct: 1118 SAYKDQKHDLFLPSNAQSSAAGVAGLIESSSSRLTYALTAPPP 1160
>ref|NP_492222.2| Receptor Mediated Endocytosis 8 RME-8, protein containing a J-domain
required for endocytosis (259.2 kD) (rme-8)
[Caenorhabditis
elegans]|gi|14134120|gb|AAK54248.1|AF372457_1 endocytosis
protein RME-8 [Caenorhabditis
elegans]|gi|19571659|emb|CAA99831.3| C. elegans RME-8
protein (corresponding sequence F18C12.2a)
[Caenorhabditis elegans]
Length = 2279
Score = 568 bits (1465), Expect = e-160
Identities = 423/1477 (28%), Positives = 671/1477 (44%), Gaps = 52/1477 (3%)
Frame = +1
Query: 2638 LNWREFWRAFGLDHNRADLIWNERTRQELIEALKAEVHNLDVEKERTEDISPGDVEATTG 2817
+NW+ F F DH++ADLIWNE+TR+E A+ E L EKE +A TG
Sbjct: 762 VNWKLFAYQFSKDHSQADLIWNEKTREEFRHAMDTETRALISEKE----------QAPTG 811
Query: 2818 QEIIPRISWNYSEFSVSYRSLSKEVCVGQYYLRLLLESGNAGKAQDFPLRDPVAFFRALY 2997
+P I+WN++EF + Y SL +E+ +G YYLRLLL + P+ +P+ FF +Y
Sbjct: 812 ---LP-IAWNHTEFQIRYPSLLEEIKIGDYYLRLLLIEADENAT---PIHNPLEFFNNVY 864
Query: 2998 HRFQCDADMGLTIDGAVPDELGSSGDWCDMSRLDGFGGGGGASVRELCARAMAIVYEQHY 3177
HRF + + LC RAMAI Y +H+
Sbjct: 865 HRFLLSTKVDMKC---------------------------------LCLRAMAITYSRHH 891
Query: 3178 NTIGPFEGTAHITALIDRTNDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTV 3357
TIG F+ + + ++ + + +
Sbjct: 892 MTIGAFQDSKYFVEMLQKCINPLERDHLVLLLSKLALNKDNVRELIISNILPLLVDLCVL 951
Query: 3358 VHENSERTPIPLQSNLIAATAFMEPP---KEWMYIDKGGAEVGPVEKDVIRSLWSKKDID 3528
H + +R + Q+N+I A+A +EW Y DK +VGP+ + ++SL+++K I
Sbjct: 952 AHLHVQRAKVQNQTNVIEASAEQMAEGGSEEWYYHDKDAKQVGPLSFEKMKSLYTEKTIF 1011
Query: 3529 WTTKCRALGMSDWKKLRDIRELRWAVA---------------VRVPVLTPSQVGDAALSI 3663
++ A GM W L + + RW V + V+ + + L
Sbjct: 1012 EKSQIWAAGMDKWMSLAAVPQFRWTVCQQKDQPNEINTGKGPFQATVMNFTDLSVLCLDT 1071
Query: 3664 LHSMVSAHSDLDDAGEIVTPTPRVKRILSSTRCLPHIAQALLSGEPVIVEAGAALLKDVV 3843
+ M D +V P P VK+ L+ L + Q LL+ EP IV+ ALL +V
Sbjct: 1072 ILQMCEFFPSRDSHDCVVRPMPSVKKQLTEPVLLYQLVQLLLTYEPQIVQR-VALLLYLV 1130
Query: 3844 TRNSKAMIRLYSTGAFYFALAYPGSNLYSIAQLFSVTHVHQAFHGGEEATVSSSLPL--- 4014
+++ + RLY +G FYF L Y GSN+ IA+ TH+ QAF S+LP
Sbjct: 1131 MQDNPFLPRLYLSGVFYFILMYNGSNVLPIARFLHYTHMKQAFR--------STLPQFEG 1182
Query: 4015 AKRSVLGGLLPESLLYVLERSGPAAFAAGMVSDSDTPEIIWTHKMRAENLICQVLQHLGD 4194
++SVL LLPE+ + LE+ GP +A + + D PEIIW MR +LI ++ H+ D
Sbjct: 1183 QRQSVLATLLPEAATFYLEQYGPEKYAEVFLGEFDNPEIIWNTAMR-RHLIERIAVHVAD 1241
Query: 4195 YPQKLSQHCHSLYDYAPMPPVTYPELRDEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQS 4374
+ +L+ + +LY + P+P + YPEL E++CH YYLR+LC++ +FP+W I + + FL+
Sbjct: 1242 FSHRLTSNVRALYQFCPIPLIDYPELAQELFCHVYYLRHLCNKQRFPDWEIRDPIPFLRC 1301
Query: 4375 LLVMWREELTRKPMDLSEGEACKILEISLNNVSSDDLNRTASVELNEEISNISKQIQNLD 4554
L W EL +KP +S A +IL + L N ++ + A +
Sbjct: 1302 CLATWYNELEKKPATMSVDLAREILSVDLTN---EEHRKPAFI----------------- 1341
Query: 4555 EEKLKRQYRKLAMRYHPDKNPEGREKFLAVQKAYECLQATMQGLQG-PQPWRLLLLLKAQ 4731
+RQY KLA +YHPDKNPEGRE F + AYE L + G P R++L L+AQ
Sbjct: 1342 ----RRQYYKLAAKYHPDKNPEGREMFERINAAYELLSSETANNSGMPDSHRIVLCLQAQ 1397
Query: 4732 CILYRRYGHVLRPFKYAGYPMLLDAVTVDKDDNNFLSNDRSPLLVAASELVSLTCAASSL 4911
I+Y RY L +KYAGY L+ + ++ D LL AA EL + T +S+L
Sbjct: 1398 SIIYSRYSQELSEYKYAGYSQLIKTIDLEAKDEALFIKGGGDLLSAAIELANYTLISSAL 1457
Query: 4912 NGEELVRDGGVQLLSTLLSRCMCVVQPTTSQHEPAAIIVTNVMRTLSVISQFESARAGFL 5091
N E+L RD G++ L T RC+ +V ++ + A + +V + + FE+ R +
Sbjct: 1458 NAEQLRRDNGLEALVTAFDRCVPMVTMSSLPDDMAVRVCIHVCDCFATAATFEACRQRLM 1517
Query: 5092 ELPSLIEDIVHCTELERVPAAVDAALQSIAKVSVFPELQHGLLKAGALWYILPLLLQYDS 5271
E+PS+ + + +P AA Q I ++V LQ L + G LW ++P L +D
Sbjct: 1518 EMPSIFGALTRLLQFSNLPRLSTAAAQCIRAMAVDTLLQFQLFQTGVLWQLVPHLFHFDY 1577
Query: 5272 TAEESNSVESHGVGVSIQIAKNEHALQASQALSRLTGLCADESLTPYNATAADVLKALLT 5451
T +E H + Q N A + +AL+ L G TP N L+ALLT
Sbjct: 1578 TLDEGG--VQHSEDSNKQSLANSLARSSCEALAALAGF---RENTPDNDGVQASLRALLT 1632
Query: 5452 PKLASLLKDEVAKDLLSKLNTNLETPEIIWNSATRSELLNFVDEQRACQCPDGSYDLKNA 5631
P + +K E +L LN+N+E P +IW++ TR+E+L FV+ R P + +L A
Sbjct: 1633 PYICRCMKLETNDMVLKTLNSNMENPYMIWDNGTRAEVLEFVERHRTSNEP--TSELYGA 1690
Query: 5632 QSFSYDALSKEVFVGNVYLKVYNDQPDSEISEPESFCNALIDFIS--SLVHTELP---SV 5796
+ F E+ VG++++++YN+QP + EP+ L+D+I S T P ++
Sbjct: 1691 E-FELSVHKNELIVGDIFIRIYNEQPTFALHEPKKVAIDLLDYIKKHSAELTGAPKPKAI 1749
Query: 5797 SEDQNLIEDRNSS--------NDTPELQSSVAEPSLIEEHSDHQPSSEGMKNEECFLIDH 5952
S+D I+ N S +T L + A +L+ + +++ K E LI +
Sbjct: 1750 SDDLIEIDWGNGSQANGNSLDTETKVLMTMTALANLVSANPGALFANK--KGVEILLIGN 1807
Query: 5953 XXXXXXXXXXXXXKYPDLASVFSSKERLLPLFECFSVAIASKTDIPKLC-LNVLSRLTAY 6129
K+P L + + +A A+K + L NV + L
Sbjct: 1808 --FPLLITYLRCRKHPKLQ---------IAALQVILLAAANKECVTDLATCNVTTTLFTL 1856
Query: 6130 APCLETMVXXXXXXXXXXXXXXXXXXFREGALHVLYALASTPELAWAAAKHEEI------ 6291
M+ L VL AL+S ++ +H +
Sbjct: 1857 LRDQPKMIAR--------------------VLDVLIALSSNGQIGKEMLEHGGLMYILSI 1896
Query: 6292 ------PLQQRAAAASLLGKLVAQPMHGPRVAITLVRFLPDGLVSIIRDGPGEAVVHALE 6453
QR AA LL KL A + GPR +++FLP+ +RD P A + +
Sbjct: 1897 LCLTNSDQGQRLQAAELLAKLQADKLTGPRWTRFIIKFLPEIFADSLRDSPNTA-LQMFD 1955
Query: 6454 RTTETPELVWTPAMAASLSAQIATMASDIYREQQKGSVIEWD----VPEQSAGQQEMRDE 6621
++E PEL+W + I T +Y + K ++W+ + A + E
Sbjct: 1956 SSSENPELIWNEVTRQKVKGIIDTEVGKLYEQHIKDPTVKWNTTSLADKSCAYGDSINGE 2015
Query: 6622 PQVGGIYVRRFLKDPKFPLRNPKRFLEGLLDQYLSAMAATHYEQHPVDPEXXXXXXXXXX 6801
VGG++VR ++++P F +R+PK F L+++ L M+ E V
Sbjct: 2016 LVVGGVFVRLYVENPGFNVRHPKLFSTELIEKVLELMSRPTPELDLV--------TKAFV 2067
Query: 6802 XXXRVHPALADHIGHLGYVPKLVAAVAYEGRRETMSS 6912
R HP AD + GY+P+ A+ + + S+
Sbjct: 2068 ELVRHHPNTADQLPSQGYLPQFCTAMCLQNTSASRSA 2104
Score = 71.2 bits (173), Expect = 2e-10
Identities = 82/338 (24%), Positives = 140/338 (41%), Gaps = 7/338 (2%)
Frame = +1
Query: 67 LARYLVVKHSWRGRYKRILCISSGGIVTLDPNTLAVTNSYDTGSNFDGASPLVGRDENTE 246
+A YLV KHSW+G+YKR+ I + I T +PNTL +TN + +F PL N +
Sbjct: 11 IACYLVTKHSWKGKYKRVFSIGTLAITTYNPNTLEITNQW-LYEDFLSVKPLRNGGSN-D 68
Query: 247 SVGGEFTVNVRTDGKGKFKAMKFSSRCRASILTELYRLRWNQIRPVAEFQVLHLRRRNAE 426
S E+ ++VR +GK M+FSS ILT + L+++ F+ L +
Sbjct: 69 SKQDEYKIHVR--NRGKNNDMRFSSDYTTDILT--HCLQFSTKFADKNFEPLTVTAFKQS 124
Query: 427 W----VPYKLKITFVGLELVDSKS--GNSRWILDFRDMGSPAIILLSDAYRTKSADSAGF 588
W +P L+ LE +D++ S + R +G +SD GF
Sbjct: 125 WSDRRIPVTLRANASCLEQIDNRGVVVQSYPYKNIRSIGK-----VSDC-------PGGF 172
Query: 589 VLCPMYGRKSKAFRAAPGTTNSSIVASLAKTAKSMVGVFLSVDDSQLLTVSEYMTRRAKE 768
V+ R+ F + + N +V + + A +G+ + + Q LT+ ++M R
Sbjct: 173 VVDVGEHRRRHMFAS---SNNEELVKEIRRLASDNIGIIVPIAKEQ-LTLEDFMRTRLGL 228
Query: 769 AVGAEE-TPNGWWSVTRLRSAAHGTLNMPGLSLAIGPKGGLGEHGDAVALQLILTKASLV 945
EE T + ++++ MP V L L++ ++
Sbjct: 229 CSRDEELTSYAEFKISKITRRN----EMP------------------VRRLLCLSETCII 266
Query: 946 ERRIDNYEXXXXXXXXXXXXXXXFAEEPQMFAIEFSDG 1059
ER + Y ++PQ F +E+ +G
Sbjct: 267 ERDLATYAVICATPLKHIVCLVRSEKDPQQFIVEYENG 304
Score = 59.3 bits (142), Expect = 9e-07
Identities = 41/138 (29%), Positives = 63/138 (44%), Gaps = 6/138 (4%)
Frame = +1
Query: 1798 VCDPHGETTQYTVFVEXXXXXXXXXXXXXXXXXHPAESVRETIAVIMRTIAEE-DAIAAE 1974
VC P+ ETT F P+ ++ + ++MR I EE D ++
Sbjct: 545 VCSPYSETTAGDTFDHILKLVSLRGRSFFRLFQCPSMTIVKGAGMVMRAIIEEADVETSK 604
Query: 1975 SMRDAALRDGALLRHLLNAF-----SLPASERREVSRQLVALWADSYQPALDLLSRVLPP 2139
SM+ AL +GA L HL + L +++S L++LW Q A DLL R LP
Sbjct: 605 SMQMLALSEGAFLTHLFMSLLSTGKDLRVMTNKQLSGHLISLWIADNQQANDLLIRCLPR 664
Query: 2140 GLVAYLHTRPDDVVDDTD 2193
GL+ Y+ + V++ D
Sbjct: 665 GLLNYMESDEKVPVNEKD 682
Score = 49.7 bits (117), Expect = 7e-04
Identities = 28/62 (45%), Positives = 36/62 (57%), Gaps = 5/62 (8%)
Frame = +1
Query: 7432 KVREILDASEVWSAYKDQKHDLFLP-----SNTQSAAGVAGFIENSSNSLTYALTAPPPP 7596
K+ EILD S VW+ +KDQ+HDLFLP + T GVAG+ LT + PPP
Sbjct: 2209 KIAEILDKSPVWAQFKDQRHDLFLPEARTQAITGGPTGVAGY-------LTEGMFNPPPM 2261
Query: 7597 SH 7602
S+
Sbjct: 2262 SN 2263
>ref|XP_039828.3| similar to hypothetical protein KIAA0678 - human (fragment) [Homo
sapiens]
Length = 1194
Score = 565 bits (1455), Expect = e-159
Identities = 405/1337 (30%), Positives = 636/1337 (47%), Gaps = 23/1337 (1%)
Frame = +1
Query: 3661 ILHSMVSAHSDLDDAGEIVTPTPRVKRILSSTRCLPHIAQALLSGEPVIVEAGAALLKDV 3840
+L +M D I+ P P+VKR+LS + CLPHI Q LL+ +P++VE A LL +
Sbjct: 1 MLITMCGYFPSRDQDNAIIRPLPKVKRLLSDSTCLPHIIQLLLTFDPILVEKVAILLYHI 60
Query: 3841 VTRNSKAMIRLYSTGAFYFALAYPGSNLYSIAQLFSVTHVHQAFHGGEEATVSSSLPLAK 4020
+ N + + RLY +G F+F + Y GSN+ +A+ TH QAF E + + +
Sbjct: 61 MQDNPQ-LPRLYLSGVFFFIMMYTGSNVLPVARFLKYTHTKQAFKSEE----TKGQDIFQ 115
Query: 4021 RSVLGGLLPESLLYVLERSGPAAFAAGMVSDSDTPEIIWTHKMRAENLICQVLQHLGDYP 4200
RS+LG +LPE+++ LE P F+ + + DTPE IW+ +MR +I ++ HL D+
Sbjct: 116 RSILGHILPEAMVCYLENYEPEKFSEIFLGEFDTPEAIWSSEMR-RLMIEKIAAHLADFT 174
Query: 4201 QKLSQHCHSLYDYAPMPPVTYPELRDEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLL 4380
+L + +LY Y P+P + YP+L +E++C+ YYL+ LCD ++FP+WPI + V+ L+ L
Sbjct: 175 PRLQSNTRALYQYCPIPIINYPQLENELFCNIYYLKQLCDTLRFPDWPIKDPVKLLKDTL 234
Query: 4381 VMWREELTRKPMDLSEGEACKILEISLNNVSSDDLNRTASVELNEEISNISKQIQNLDEE 4560
W++E+ +KP +S +A ++L N+ + DE
Sbjct: 235 DAWKKEVEKKPPMMSIDDAYEVL-------------------------NLPQGQGPHDES 269
Query: 4561 KLKRQYRKLAMRYHPDKNPEGREKFLAVQKAYECL-QATMQGLQGPQPWRLLLLLKAQCI 4737
K+++ Y +LA +YHPDKNPEGR+ F V KAYE L + + + GP P ++L+LK Q I
Sbjct: 270 KIRKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFLCTKSAKIVDGPDPENIILILKTQSI 329
Query: 4738 LYRRYGHVLRPFKYAGYPMLLDAVTVDKDDNNFLSNDRSPLLVAASELVSLTCAASSLNG 4917
L+ R+ L+P+KYAGYPML+ +T++ D+ S + SPLL AA+EL T S+LN
Sbjct: 330 LFNRHKEDLQPYKYAGYPMLIRTITMETSDDLLFSKE-SPLLPAATELAFHTVNCSALNA 388
Query: 4918 EELVRDGGVQLLSTLLSRCMCVVQPTTSQHEPAAIIVTNVMRTLSVISQFESARAGFLEL 5097
EEL R+ G+++L SRC+ V+ + + + + + + SV +QFE R E+
Sbjct: 389 EELRRENGLEVLQEAFSRCVAVLTRASKPSDMSVQVCGYISKCYSVAAQFEECREKITEM 448
Query: 5098 PSLIEDIVHCTELER-VPAAVDAALQSIAKVSVFPELQHGLLKAGALWYILPLLLQYDST 5274
PS+I+D+ + +P ++ ++ +V LQ L +AG LWY+L L YD T
Sbjct: 449 PSIIKDLCRVLYFGKSIPRVAALGVECVSSFAVDFWLQTHLFQAGILWYLLGFLFNYDYT 508
Query: 5275 AEESNSVESHGVGVSIQIAKNEHALQASQALSRLTGLCADESLTPYNATAADVLKALLTP 5454
EES +S Q N A + ALSRL G A+E TP N T L +LTP
Sbjct: 509 LEESGIQKSEETNQ--QEVANSLAKLSVHALSRLGGYLAEEQATPENPTIRKSLAGMLTP 566
Query: 5455 KLASLLKDEVAKDLLSKLNTNLETPEIIWNSATRSELLNFVDEQRACQCPDGSYDLKNAQ 5634
+A L ++L LN+N E+P +IWN++TR+ELL F++ Q+ G D
Sbjct: 567 YVARKLAVASVTEILKMLNSNTESPYLIWNNSTRAELLEFLESQQENMIKKGDCDKTYGS 626
Query: 5635 SFSYDALSKEVFVGNVYLKVYNDQPDSEISEPESFCNALIDFISS---LVHTELPSVSED 5805
F Y +KE+ VG ++++VYN+ P ++ P++F +L+D+I S +HT +
Sbjct: 627 EFVYSDHAKELIVGEIFVRVYNEVPTFQLEVPKAFAASLLDYIGSQAQYLHTFMAITHAA 686
Query: 5806 QNLIEDRNSSNDTPELQSSVAEPSLIEEHSDHQPSSEGMKNEECFLIDHXXXXXXXXXXX 5985
+ +E + P ++ ++ + + P SE EC I H
Sbjct: 687 K--VESEQHGDRLPRVEMAL---EALRNVIKYNPGSE----SEC--IGH----------- 724
Query: 5986 XXKYPDLASVFSSKERLLPLFECFSVAIASKTDIPKLCLNVLSRLTAYAPCLETMVXXXX 6165
+FS + + + +L L V++ +T+ C+ +
Sbjct: 725 ------FKLIFS------------LLRVHGAGQVQQLALEVVNIVTSNQDCVNN-IAESM 765
Query: 6166 XXXXXXXXXXXXXXFREGALHVLYAL-ASTPELAWAAAKHEEIPL----------QQRAA 6312
R+ L LYAL +ST + A AK I L Q RA
Sbjct: 766 VLSSLLALLHSLPSSRQLVLETLYALTSSTKIIKEAMAKGALIYLLDMFCNSTHPQVRAQ 825
Query: 6313 AASLLGKLVAQPMHGPRVAITLVRFLPDGLVSIIRDGPGEAVVHALERTTETPELVWTPA 6492
A L K+ A + GP+V ITL++FLP + +RD P EA VH E T E PEL+W
Sbjct: 826 TAELFAKMTADKLIGPKVRITLMKFLPSVFMDAMRDNP-EAAVHIFEGTHENPELIWNDN 884
Query: 6493 MAASLSAQIATMASDIYREQQKGSVIEWDVPEQSAGQ-QEMRDEPQVGGIYVRRFLKDPK 6669
+S + M + ++ QQ W +PE A E E VGG+++R F+ P
Sbjct: 885 SRDKVSTTVREMMLEHFKNQQDNPEANWKLPEDFAVVFGEAEGELAVGGVFLRIFIAQPA 944
Query: 6670 FPLRNPKRFLEGLLDQYLSAMAATHYEQHPVDPEXXXXXXXXXXXXXRVHPALADHIGHL 6849
+ LR P+ FL LL++ + E++ E P LAD + L
Sbjct: 945 WVLRKPREFLIALLEKLTELL-----EKNNPHGETLETLTMATVCLFSAQPQLADQVPPL 999
Query: 6850 GYVPKLVAAVAYEGRRETMSSGEVKAEEIGSDGVNESTDPSSLPGQTPQERVRLSCLRVL 7029
G++PK++ A+ + + S +RV+
Sbjct: 1000 GHLPKVIQAMNHR-----------------------------------NNAIPKSAIRVI 1024
Query: 7030 HQLXXXXXXXXXXXXXXXGNAQVVPLLMKAIGWLGGSI-LALETLKRVVVAGNRARDALV 7206
H L + + + LM + ++ LA E + R+ + + LV
Sbjct: 1025 HAL-----SENELCVRAMASLETIGPLMNGMKKRADTVGLACEAINRMF---QKEQSELV 1076
Query: 7207 AQGLKVGLIEVLLGLLDWRTGGRYGLSSHMKWNESEASIGRVLAXXXXXXXXXXXXXXCV 7386
AQ LK L+ LL LL+ GL + ++A I + L +
Sbjct: 1077 AQALKADLVPYLLKLLE-----GIGLENLDSPAATKAQIVKAL--------------KAM 1117
Query: 7387 THVLHGFATEGAHCSKVREILDASEVWSAYKDQKHDLFLPSNTQSAA-----GVAGFIEN 7551
T L + +V EIL S VWSA+KDQKHDLF+ S +Q+A GVAG++
Sbjct: 1118 TRSLQ-------YGEQVNEILCRSSVWSAFKDQKHDLFI-SESQTAGYLTGPGVAGYL-T 1168
Query: 7552 SSNSLTYALTAPPPPSH 7602
+ S + PPP H
Sbjct: 1169 AGTSTSVMSNLPPPVDH 1185
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 140
effective length of database: 241,722,101
effective search space used: 578924431895
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)