BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.4541.C1
(7386 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178124.1| splicing factor Prp8, putative; protein id... 4684 0.0
pir||B96832 hypothetical protein F18B13.15 [imported] - Ara... 4628 0.0
dbj|BAA78744.1| EST AU065533(C2174) corresponds to a region... 4402 0.0
ref|NP_195589.1| splicing factor - like protein; protein id... 4338 0.0
gb|AAC61776.1| splicing factor Prp8 [Homo sapiens] 3982 0.0
>ref|NP_178124.1| splicing factor Prp8, putative; protein id: At1g80070.1 [Arabidopsis
thaliana]
Length = 2382
Score = 4684 bits (12150), Expect = 0.0
Identities = 2283/2382 (95%), Positives = 2283/2382 (95%)
Frame = +1
Query: 1 MWNNNDGMPLXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
MWNNNDGMPL Y
Sbjct: 1 MWNNNDGMPLAPPGTGGSMMPPPPAAHPSYTALPPPSNPTPPVEPTPEEAEAKLEEKARK 60
Query: 181 WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRLVFFSSFSTISKYSLLDNYFLARDH 360
WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRLVFFSSFSTISKYSLLDNYFLARDH
Sbjct: 61 WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRLVFFSSFSTISKYSLLDNYFLARDH 120
Query: 361 GDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIP 540
GDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIP
Sbjct: 121 GDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIP 180
Query: 541 WVVEPIYMAQWGTMWIXXXXXXXXXXXXXXXXXXXXXXXXXXLDYADNLLDVDPLEPIQL 720
WVVEPIYMAQWGTMWI LDYADNLLDVDPLEPIQL
Sbjct: 181 WVVEPIYMAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQL 240
Query: 721 ELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNY 900
ELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNY
Sbjct: 241 ELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNY 300
Query: 901 FYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRI 1080
FYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRI
Sbjct: 301 FYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRI 360
Query: 1081 AFPHLYNNRPRKVKLCVYHSPMIMYIKTEDPDLPAFYYDPLIHPISNTNKEKRERKVYDD 1260
AFPHLYNNRPRKVKLCVYHSPMIMYIKTEDPDLPAFYYDPLIHPISNTNKEKRERKVYDD
Sbjct: 361 AFPHLYNNRPRKVKLCVYHSPMIMYIKTEDPDLPAFYYDPLIHPISNTNKEKRERKVYDD 420
Query: 1261 EDDFALPEGVEPLLRDTQLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEWFKEH 1440
EDDFALPEGVEPLLRDTQLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEWFKEH
Sbjct: 421 EDDFALPEGVEPLLRDTQLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEWFKEH 480
Query: 1441 CPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVGL 1620
CPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVGL
Sbjct: 481 CPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVGL 540
Query: 1621 QVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLT 1800
QVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLT
Sbjct: 541 QVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLT 600
Query: 1801 KLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYY 1980
KLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYY
Sbjct: 601 KLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYY 660
Query: 1981 RFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTK 2160
RFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTK
Sbjct: 661 RFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTK 720
Query: 2161 QRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVP 2340
QRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVP
Sbjct: 721 QRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVP 780
Query: 2341 IENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNY 2520
IENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNY
Sbjct: 781 IENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNY 840
Query: 2521 LKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAV 2700
LKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAV
Sbjct: 841 LKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAV 900
Query: 2701 RLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEIEPL 2880
RLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEIEPL
Sbjct: 901 RLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEIEPL 960
Query: 2881 EKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQCV 3060
EKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQCV
Sbjct: 961 EKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQCV 1020
Query: 3061 VMLQTKFEKFFEKIDXXXXXXXXXXXXDHNIADYVSAKNNVVLSYKDMSHTNSYGLIRGL 3240
VMLQTKFEKFFEKID DHNIADYVSAKNNVVLSYKDMSHTNSYGLIRGL
Sbjct: 1021 VMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVSAKNNVVLSYKDMSHTNSYGLIRGL 1080
Query: 3241 QFASFVVQFYXXXXXXXXXXXTRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRYIDK 3420
QFASFVVQFY TRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRYIDK
Sbjct: 1081 QFASFVVQFYGLLLDLLLLGLTRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRYIDK 1140
Query: 3421 VHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVF 3600
VHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVF
Sbjct: 1141 VHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVF 1200
Query: 3601 WDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGV 3780
WDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGV
Sbjct: 1201 WDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGV 1260
Query: 3781 WNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTY 3960
WNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTY
Sbjct: 1261 WNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTY 1320
Query: 3961 FREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHI 4140
FREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHI
Sbjct: 1321 FREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHI 1380
Query: 4141 LIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKR 4320
LIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKR
Sbjct: 1381 LIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKR 1440
Query: 4321 QEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPF 4500
QEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPF
Sbjct: 1441 QEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPF 1500
Query: 4501 WWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESM 4680
WWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESM
Sbjct: 1501 WWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESM 1560
Query: 4681 KYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISL 4860
KYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISL
Sbjct: 1561 KYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISL 1620
Query: 4861 IQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFA 5040
IQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFA
Sbjct: 1621 IQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFA 1680
Query: 5041 AHKWPMSKPSLVAESKDMFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMS 5220
AHKWPMSKPSLVAESKDMFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMS
Sbjct: 1681 AHKWPMSKPSLVAESKDMFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMS 1740
Query: 5221 IYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQL 5400
IYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQL
Sbjct: 1741 IYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQL 1800
Query: 5401 YSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 5580
YSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1801 YSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1860
Query: 5581 TGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLE 5760
TGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLE
Sbjct: 1861 TGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLE 1920
Query: 5761 VHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISPYTAF 5940
VHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSIS YTAF
Sbjct: 1921 VHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAF 1980
Query: 5941 SRLILILRALHVNNEKAKMLLKPDKSVVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAK 6120
SRLILILRALHVNNEKAKMLLKPDKSVVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAK
Sbjct: 1981 SRLILILRALHVNNEKAKMLLKPDKSVVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAK 2040
Query: 6121 KNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDE 6300
KNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDE
Sbjct: 2041 KNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDE 2100
Query: 6301 LIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKK 6480
LIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKK
Sbjct: 2101 LIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKK 2160
Query: 6481 FICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFLNDLE 6660
FICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFLNDLE
Sbjct: 2161 FICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFLNDLE 2220
Query: 6661 PLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQT 6840
PLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQT
Sbjct: 2221 PLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQT 2280
Query: 6841 GYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHTLSMK 7020
GYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHTLSMK
Sbjct: 2281 GYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHTLSMK 2340
Query: 7021 YSVKLGSPKEFYHEEHRPTHFLEFSNMEEADITEGDREDTFT 7146
YSVKLGSPKEFYHEEHRPTHFLEFSNMEEADITEGDREDTFT
Sbjct: 2341 YSVKLGSPKEFYHEEHRPTHFLEFSNMEEADITEGDREDTFT 2382
>pir||B96832 hypothetical protein F18B13.15 [imported] - Arabidopsis
thaliana|gi|5902365|gb|AAD55467.1|AC009322_7 Putative
splicing factor Prp8 [Arabidopsis thaliana]
Length = 2359
Score = 4628 bits (12003), Expect = 0.0
Identities = 2260/2382 (94%), Positives = 2260/2382 (94%)
Frame = +1
Query: 1 MWNNNDGMPLXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
MWNNNDGMPL Y
Sbjct: 1 MWNNNDGMPLAPPGTGGSMMPPPPAAHPSYTALPPPSNPTPPVEPTPEEAEAKLEEKARK 60
Query: 181 WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRLVFFSSFSTISKYSLLDNYFLARDH 360
WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIR DH
Sbjct: 61 WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIR-----------------------DH 97
Query: 361 GDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIP 540
GDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIP
Sbjct: 98 GDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIP 157
Query: 541 WVVEPIYMAQWGTMWIXXXXXXXXXXXXXXXXXXXXXXXXXXLDYADNLLDVDPLEPIQL 720
WVVEPIYMAQWGTMWI LDYADNLLDVDPLEPIQL
Sbjct: 158 WVVEPIYMAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQL 217
Query: 721 ELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNY 900
ELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNY
Sbjct: 218 ELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNY 277
Query: 901 FYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRI 1080
FYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRI
Sbjct: 278 FYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRI 337
Query: 1081 AFPHLYNNRPRKVKLCVYHSPMIMYIKTEDPDLPAFYYDPLIHPISNTNKEKRERKVYDD 1260
AFPHLYNNRPRKVKLCVYHSPMIMYIKTEDPDLPAFYYDPLIHPISNTNKEKRERKVYDD
Sbjct: 338 AFPHLYNNRPRKVKLCVYHSPMIMYIKTEDPDLPAFYYDPLIHPISNTNKEKRERKVYDD 397
Query: 1261 EDDFALPEGVEPLLRDTQLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEWFKEH 1440
EDDFALPEGVEPLLRDTQLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEWFKEH
Sbjct: 398 EDDFALPEGVEPLLRDTQLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEWFKEH 457
Query: 1441 CPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVGL 1620
CPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVGL
Sbjct: 458 CPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVGL 517
Query: 1621 QVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLT 1800
QVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLT
Sbjct: 518 QVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLT 577
Query: 1801 KLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYY 1980
KLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYY
Sbjct: 578 KLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYY 637
Query: 1981 RFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTK 2160
RFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTK
Sbjct: 638 RFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTK 697
Query: 2161 QRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVP 2340
QRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVP
Sbjct: 698 QRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVP 757
Query: 2341 IENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNY 2520
IENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNY
Sbjct: 758 IENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNY 817
Query: 2521 LKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAV 2700
LKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAV
Sbjct: 818 LKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAV 877
Query: 2701 RLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEIEPL 2880
RLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEIEPL
Sbjct: 878 RLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEIEPL 937
Query: 2881 EKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQCV 3060
EKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQCV
Sbjct: 938 EKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQCV 997
Query: 3061 VMLQTKFEKFFEKIDXXXXXXXXXXXXDHNIADYVSAKNNVVLSYKDMSHTNSYGLIRGL 3240
VMLQTKFEKFFEKID DHNIADYVSAKNNVVLSYKDMSHTNSYGLIRGL
Sbjct: 998 VMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVSAKNNVVLSYKDMSHTNSYGLIRGL 1057
Query: 3241 QFASFVVQFYXXXXXXXXXXXTRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRYIDK 3420
QFASFVVQFY TRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRYIDK
Sbjct: 1058 QFASFVVQFYGLLLDLLLLGLTRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRYIDK 1117
Query: 3421 VHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVF 3600
VHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVF
Sbjct: 1118 VHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVF 1177
Query: 3601 WDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGV 3780
WDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGV
Sbjct: 1178 WDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGV 1237
Query: 3781 WNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTY 3960
WNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTY
Sbjct: 1238 WNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTY 1297
Query: 3961 FREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHI 4140
FREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHI
Sbjct: 1298 FREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHI 1357
Query: 4141 LIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKR 4320
LIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKR
Sbjct: 1358 LIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKR 1417
Query: 4321 QEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPF 4500
QEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPF
Sbjct: 1418 QEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPF 1477
Query: 4501 WWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESM 4680
WWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESM
Sbjct: 1478 WWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESM 1537
Query: 4681 KYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISL 4860
KYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISL
Sbjct: 1538 KYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISL 1597
Query: 4861 IQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFA 5040
IQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFA
Sbjct: 1598 IQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFA 1657
Query: 5041 AHKWPMSKPSLVAESKDMFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMS 5220
AHKWPMSKPSLVAESKDMFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMS
Sbjct: 1658 AHKWPMSKPSLVAESKDMFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMS 1717
Query: 5221 IYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQL 5400
IYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQL
Sbjct: 1718 IYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQL 1777
Query: 5401 YSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 5580
YSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1778 YSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1837
Query: 5581 TGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLE 5760
TGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLE
Sbjct: 1838 TGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLE 1897
Query: 5761 VHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISPYTAF 5940
VHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSIS YTAF
Sbjct: 1898 VHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAF 1957
Query: 5941 SRLILILRALHVNNEKAKMLLKPDKSVVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAK 6120
SRLILILRALHVNNEKAKMLLKPDKSVVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAK
Sbjct: 1958 SRLILILRALHVNNEKAKMLLKPDKSVVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAK 2017
Query: 6121 KNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDE 6300
KNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDE
Sbjct: 2018 KNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDE 2077
Query: 6301 LIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKK 6480
LIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKK
Sbjct: 2078 LIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKK 2137
Query: 6481 FICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFLNDLE 6660
FICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFLNDLE
Sbjct: 2138 FICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFLNDLE 2197
Query: 6661 PLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQT 6840
PLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQT
Sbjct: 2198 PLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQT 2257
Query: 6841 GYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHTLSMK 7020
GYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHTLSMK
Sbjct: 2258 GYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHTLSMK 2317
Query: 7021 YSVKLGSPKEFYHEEHRPTHFLEFSNMEEADITEGDREDTFT 7146
YSVKLGSPKEFYHEEHRPTHFLEFSNMEEADITEGDREDTFT
Sbjct: 2318 YSVKLGSPKEFYHEEHRPTHFLEFSNMEEADITEGDREDTFT 2359
>dbj|BAA78744.1| EST AU065533(C2174) corresponds to a region of the predicted
gene.~Similar to Homo sapiens splicing factor Prp8 mRNA,
complete cds.(AF092565) [Oryza sativa (japonica
cultivar-group)]
Length = 2391
Score = 4402 bits (11416), Expect = 0.0
Identities = 2119/2325 (91%), Positives = 2203/2325 (94%), Gaps = 3/2325 (0%)
Frame = +1
Query: 181 WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRLVFFSSFSTISKYSLLDNYFLARDH 360
W QLNSKRYGDKRKFGFVE QKEDMPPEHVRKIIR DH
Sbjct: 60 WHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIR-----------------------DH 96
Query: 361 GDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIP 540
GDMSSKK+RHDKRVYLGALKFVPHAV+KLLENMPMPWEQVR VK+LYHITGAITFVNEIP
Sbjct: 97 GDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRHVKILYHITGAITFVNEIP 156
Query: 541 WVVEPIYMAQWGTMWIXXXXXXXXXXXXXXXXXXXXXXXXXXLDYADNLLDVDPLEPIQL 720
WVVEPIY+AQWGTMWI LDYADNLLDV+PLE IQL
Sbjct: 157 WVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQL 216
Query: 721 ELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNY 900
ELDEEEDSAVH WFYDHKPLVKTKLINGPSYR+W+LSLPIMATL+RLAGQLLSDLIDRNY
Sbjct: 217 ELDEEEDSAVHEWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLYRLAGQLLSDLIDRNY 276
Query: 901 FYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRI 1080
FYLFDM SFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIR PLRTEYRI
Sbjct: 277 FYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRI 336
Query: 1081 AFPHLYNNRPRKVKLCVYHSPMIMYIKTEDPDLPAFYYDPLIHPISNTNK-EKRERKVY- 1254
AFPHLYNNRPRKV+L VYH+PMIMYIKTEDPDLPAFYYDPLI+PI++TNK ++RER+
Sbjct: 337 AFPHLYNNRPRKVRLGVYHTPMIMYIKTEDPDLPAFYYDPLINPITSTNKVDRRERRTTE 396
Query: 1255 -DDEDDFALPEGVEPLLRDTQLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEWF 1431
D+++DF LP+GVEPLL+ T+LYTDTTAAGISLLFAP+PFNMRSGRTRRAEDIPLVSEW+
Sbjct: 397 EDEDEDFRLPDGVEPLLKGTELYTDTTAAGISLLFAPKPFNMRSGRTRRAEDIPLVSEWY 456
Query: 1432 KEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVE 1611
KEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSL ATKFFQ+TELDW E
Sbjct: 457 KEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAE 516
Query: 1612 VGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREIL 1791
GLQVC+QGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREIL
Sbjct: 517 AGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREIL 576
Query: 1792 RLTKLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHL 1971
RLTKLVVDAN+QFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHL
Sbjct: 577 RLTKLVVDANIQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHL 636
Query: 1972 IYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKT 2151
IYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKT
Sbjct: 637 IYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKT 696
Query: 2152 VTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGL 2331
VTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGL
Sbjct: 697 VTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGL 756
Query: 2332 PVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQ 2511
PVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQ
Sbjct: 757 PVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQ 816
Query: 2512 HNYLKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYS 2691
HNYLKDGPYVTPEEA+AIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYS
Sbjct: 817 HNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYS 876
Query: 2692 VAVRLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEI 2871
VAVRLNQ QREELGLIEQAYDNPHEALSRIKRHLLTQR FKEVGIEFMDLYSYLIPVYEI
Sbjct: 877 VAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEI 936
Query: 2872 EPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDG 3051
EPLEKITDAYLDQYLWYEGDKRHLFPNW+KPADSEPPPLLVYKWCQGINNLQ +WDT DG
Sbjct: 937 EPLEKITDAYLDQYLWYEGDKRHLFPNWVKPADSEPPPLLVYKWCQGINNLQDVWDTSDG 996
Query: 3052 QCVVMLQTKFEKFFEKIDXXXXXXXXXXXXDHNIADYVSAKNNVVLSYKDMSHTNSYGLI 3231
QCVVMLQTKFEKFFEKID DHNIADYV+AKNNVVLSYKDMSHTNSYGLI
Sbjct: 997 QCVVMLQTKFEKFFEKIDLTLLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLI 1056
Query: 3232 RGLQFASFVVQFYXXXXXXXXXXXTRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRY 3411
RGLQFASFVVQ+Y TRASEIAGPP MPNEF+T+ DTKVETRHPIRLYSRY
Sbjct: 1057 RGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPTMPNEFLTYADTKVETRHPIRLYSRY 1116
Query: 3412 IDKVHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGR 3591
IDKVHIMF+FTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGR
Sbjct: 1117 IDKVHIMFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGR 1176
Query: 3592 SVFWDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTK 3771
SVFWDMKNRLPRSITTLEWEN FVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTK
Sbjct: 1177 SVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTK 1236
Query: 3772 DGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGL 3951
DGVWNLQNEQTKERTA+AFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGL
Sbjct: 1237 DGVWNLQNEQTKERTAIAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGL 1296
Query: 3952 MTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSM 4131
MTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSM
Sbjct: 1297 MTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSM 1356
Query: 4132 GHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYA 4311
GHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYA
Sbjct: 1357 GHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYA 1416
Query: 4312 LKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQ 4491
LKRQEAQ+QNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQ
Sbjct: 1417 LKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQ 1476
Query: 4492 NPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFE 4671
NPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFE
Sbjct: 1477 NPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFE 1536
Query: 4672 ESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLK 4851
ESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLK
Sbjct: 1537 ESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLK 1596
Query: 4852 ISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVL 5031
ISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCAD+L
Sbjct: 1597 ISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADIL 1656
Query: 5032 LFAAHKWPMSKPSLVAESKDMFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTD 5211
LFAAH+W MSKPSLV+ESKD+FDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTD
Sbjct: 1657 LFAAHRWQMSKPSLVSESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTD 1716
Query: 5212 NMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKG 5391
NMSIYPSPTGVMIG+DLAYNLHSAFGNWFPGSKPLL QAMNKIMKSNPALYVLRERIRKG
Sbjct: 1717 NMSIYPSPTGVMIGIDLAYNLHSAFGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKG 1776
Query: 5392 LQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIF 5571
LQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIF
Sbjct: 1777 LQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIF 1836
Query: 5572 NPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLD 5751
NPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLD
Sbjct: 1837 NPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLD 1896
Query: 5752 PLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISPY 5931
PLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVL+NIYDDWLKSIS +
Sbjct: 1897 PLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLYNIYDDWLKSISSF 1956
Query: 5932 TAFSRLILILRALHVNNEKAKMLLKPDKSVVTEPHHIWPSLTDDQWMKVEVALRDLILSD 6111
TAFSR++LILRALHVNNEKAKMLLKPDK++VTEPHHIWP+LTD+QW+KVE ALRDLILSD
Sbjct: 1957 TAFSRIVLILRALHVNNEKAKMLLKPDKTIVTEPHHIWPTLTDEQWLKVECALRDLILSD 2016
Query: 6112 YAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVH 6291
YAKKNNVNTSALTQSEIRDIILGAEI PPSQQRQQIAEIEKQ++E +QLTAVTTRTTNVH
Sbjct: 2017 YAKKNNVNTSALTQSEIRDIILGAEIAPPSQQRQQIAEIEKQSRETTQLTAVTTRTTNVH 2076
Query: 6292 GDELIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNI 6471
GDELI+TTTSPYEQ AF SKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNI
Sbjct: 2077 GDELIITTTSPYEQQAFASKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNI 2136
Query: 6472 LKKFICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFLN 6651
LKKFIC+ADLRTQIAG+LYG+SP DNPQVKEIRC+ + PQ G HQ+V LP++LPEH+FLN
Sbjct: 2137 LKKFICIADLRTQIAGFLYGLSPQDNPQVKEIRCIAIPPQHGTHQMVTLPANLPEHEFLN 2196
Query: 6652 DLEPLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKL 6831
DLEPLGW+HTQPNE PQLSPQD+TSH++ILENNKQWDGEKCIILTCSFTPGSCSLT+YKL
Sbjct: 2197 DLEPLGWMHTQPNEAPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKL 2256
Query: 6832 TQTGYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHTL 7011
T +GYEWGR NKD GSNPHGYLPTHYEKVQMLLSDRFLGFYMVP++ PWN++F GVKH
Sbjct: 2257 TPSGYEWGRSNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNTPWNFNFMGVKHDP 2316
Query: 7012 SMKYSVKLGSPKEFYHEEHRPTHFLEFSNMEEADITEGDREDTFT 7146
MKY++KLG+P++FYHE+HRPTHFLEFSN++E ++ EGDREDTFT
Sbjct: 2317 LMKYNMKLGTPRDFYHEDHRPTHFLEFSNIDEGEVAEGDREDTFT 2361
>ref|NP_195589.1| splicing factor - like protein; protein id: At4g38780.1 [Arabidopsis
thaliana]|gi|7488347|pir||T06077 splicing factor PRP8
homolog T9A14.60 - Arabidopsis
thaliana|gi|4490330|emb|CAB38612.1| splicing factor-like
protein [Arabidopsis thaliana]|gi|7270861|emb|CAB80541.1|
splicing factor-like protein [Arabidopsis thaliana]
Length = 2352
Score = 4338 bits (11251), Expect = 0.0
Identities = 2102/2325 (90%), Positives = 2174/2325 (93%), Gaps = 4/2325 (0%)
Frame = +1
Query: 181 WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRLVFFSSFSTISKYSLLDNYFLARDH 360
WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIR
Sbjct: 59 WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIR------------------------- 93
Query: 361 GDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIP 540
+K R DKRVYLGALKFVPHAVFKLLENMPMPWEQV VLYHITGAITFVNE+
Sbjct: 94 -----RKHRLDKRVYLGALKFVPHAVFKLLENMPMPWEQVIIHLVLYHITGAITFVNEVR 148
Query: 541 WVVEPIYMAQWGTMWIXXXXXXXXXXXXXXXXXXXXXXXXXXLDYADNLLDVDPLEPIQL 720
WVVEPIYMAQWG+MWI LDYADNLLDVDPLE IQL
Sbjct: 149 WVVEPIYMAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEAIQL 208
Query: 721 ELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNY 900
ELDEEEDSAV++WFYDHKPLVKTK+INGPSY+ WNLSLPIM+TLHRLA QLLSDL+DRNY
Sbjct: 209 ELDEEEDSAVYSWFYDHKPLVKTKMINGPSYQTWNLSLPIMSTLHRLAAQLLSDLVDRNY 268
Query: 901 FYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRI 1080
FYLFDMPSFFTAKALNMCIPGGPKFEPL+RDMEKGDEDWNEFNDINKLIIRSPLRTEY++
Sbjct: 269 FYLFDMPSFFTAKALNMCIPGGPKFEPLHRDMEKGDEDWNEFNDINKLIIRSPLRTEYKV 328
Query: 1081 AFPHLYNNRPRKVKLCVYHSPMIMYIKTEDPDLPAFYYDPLIHPISN---TNKEKRERKV 1251
AFPHLYNNRPRKVKLCVYH+PM+MYIKTEDPDLPAFYYDPLIHPISN TNKE+R+
Sbjct: 329 AFPHLYNNRPRKVKLCVYHTPMVMYIKTEDPDLPAFYYDPLIHPISNSNNTNKEQRKSNG 388
Query: 1252 YDDE-DDFALPEGVEPLLRDTQLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEW 1428
YDD+ DDF LPEG+EPLL ++ LYTDTTA GISLLFAPRPFNMRSGRTRRAEDIPLV+EW
Sbjct: 389 YDDDGDDFVLPEGLEPLLNNSPLYTDTTAPGISLLFAPRPFNMRSGRTRRAEDIPLVAEW 448
Query: 1429 FKEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWV 1608
FKEHCPPAYPVKVRVSYQKLLKCY+LNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWV
Sbjct: 449 FKEHCPPAYPVKVRVSYQKLLKCYLLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWV 508
Query: 1609 EVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREI 1788
EVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREI
Sbjct: 509 EVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREI 568
Query: 1789 LRLTKLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKH 1968
LRLTKLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKH
Sbjct: 569 LRLTKLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKH 628
Query: 1969 LIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAK 2148
LIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAK
Sbjct: 629 LIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAK 688
Query: 2149 TVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPG 2328
TVTKQRVESHFDLELRAAVMHDV+DAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPG
Sbjct: 689 TVTKQRVESHFDLELRAAVMHDVVDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPG 748
Query: 2329 LPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQER 2508
LPV IENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQER
Sbjct: 749 LPVAIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQER 808
Query: 2509 QHNYLKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESY 2688
QHN+ KDGPYVT +E +AIY+TTV+WLESRKFS IPFPPLSYKHDTKLLILALERLKESY
Sbjct: 809 QHNFQKDGPYVTADEGIAIYSTTVNWLESRKFSAIPFPPLSYKHDTKLLILALERLKESY 868
Query: 2689 SVAVRLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYE 2868
S AV+LNQQQREELGLIEQAYDNPHEAL RIKRHLLTQ FKEVGIEFMDLYS+LIPVY+
Sbjct: 869 SAAVKLNQQQREELGLIEQAYDNPHEALMRIKRHLLTQHSFKEVGIEFMDLYSHLIPVYQ 928
Query: 2869 IEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGD 3048
I+PLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDT D
Sbjct: 929 IDPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTSD 988
Query: 3049 GQCVVMLQTKFEKFFEKIDXXXXXXXXXXXXDHNIADYVSAKNNVVLSYKDMSHTNSYGL 3228
GQCVVMLQTKFEK FEKID D +A+YV+ KNNVVLSYKDMS+TN+YGL
Sbjct: 989 GQCVVMLQTKFEKLFEKIDLTVLNSLLRLVLDPKLANYVTGKNNVVLSYKDMSYTNTYGL 1048
Query: 3229 IRGLQFASFVVQFYXXXXXXXXXXXTRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSR 3408
IRGLQFASFVVQFY TRASEIAGPPQ PNEFMT+WDTKVETRHPIRLYSR
Sbjct: 1049 IRGLQFASFVVQFYGLVLDLLLLGLTRASEIAGPPQRPNEFMTYWDTKVETRHPIRLYSR 1108
Query: 3409 YIDKVHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLG 3588
YIDKVHIMFKFTHEEARDLIQR+LTE PDPNNENMVGYNNKKCWPRDARMRLMKHDVNLG
Sbjct: 1109 YIDKVHIMFKFTHEEARDLIQRHLTERPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLG 1168
Query: 3589 RSVFWDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNT 3768
RSVFWDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVR+LPKIRM QEAFS+T
Sbjct: 1169 RSVFWDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRVLPKIRMGQEAFSST 1228
Query: 3769 KDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIG 3948
+DGVWNLQNEQTKERTAVAFLR DDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIG
Sbjct: 1229 RDGVWNLQNEQTKERTAVAFLRADDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIG 1288
Query: 3949 LMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLS 4128
LMTYFREATVHTQELLDLLVKCENKIQTR+KIGLNSKMPSRFPPVIFYTPKEIGGLGMLS
Sbjct: 1289 LMTYFREATVHTQELLDLLVKCENKIQTRVKIGLNSKMPSRFPPVIFYTPKEIGGLGMLS 1348
Query: 4129 MGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEY 4308
MGHILIPQSDLRYS QTDVGV+HFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEY
Sbjct: 1349 MGHILIPQSDLRYSNQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEY 1408
Query: 4309 ALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLK 4488
ALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ LK
Sbjct: 1409 ALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQALK 1468
Query: 4489 QNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGF 4668
QNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGF
Sbjct: 1469 QNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGF 1528
Query: 4669 EESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTL 4848
EESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI+MHGKIPTL
Sbjct: 1529 EESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIYMHGKIPTL 1588
Query: 4849 KISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADV 5028
KISLIQIFRAHLWQKIHESVVMDLCQVLDQEL+ LEIETVQKETIHPRKSYKMNSSCADV
Sbjct: 1589 KISLIQIFRAHLWQKIHESVVMDLCQVLDQELEPLEIETVQKETIHPRKSYKMNSSCADV 1648
Query: 5029 LLFAAHKWPMSKPSLVAESKDMFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTT 5208
LLFAAHKWPMSKPSL+AESKD+FDQKASNKYWIDVQLRWGDYDSHDIERYT+AKFMDYTT
Sbjct: 1649 LLFAAHKWPMSKPSLIAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTKAKFMDYTT 1708
Query: 5209 DNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRK 5388
DNMSIYPSPTGV+IGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRK
Sbjct: 1709 DNMSIYPSPTGVIIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRK 1768
Query: 5389 GLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFI 5568
GLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPING IFI
Sbjct: 1769 GLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGVIFI 1828
Query: 5569 FNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGML 5748
FNPRTGQLFLK+IHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQ+IVTRKGML
Sbjct: 1829 FNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQVIVTRKGML 1888
Query: 5749 DPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISP 5928
DPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQM LFNIYDDWL ++S
Sbjct: 1889 DPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMALFNIYDDWLMTVSS 1948
Query: 5929 YTAFSRLILILRALHVNNEKAKMLLKPDKSVVTEPHHIWPSLTDDQWMKVEVALRDLILS 6108
YTAF RLILILRALHVNNEKAKMLLKPD SVVTEP+HIWPSLTDDQWMKVEVALRDLILS
Sbjct: 1949 YTAFQRLILILRALHVNNEKAKMLLKPDMSVVTEPNHIWPSLTDDQWMKVEVALRDLILS 2008
Query: 6109 DYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNV 6288
DYAKKN VNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNV
Sbjct: 2009 DYAKKNKVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNV 2068
Query: 6289 HGDELIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKN 6468
HGDELI TT SPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKN
Sbjct: 2069 HGDELISTTISPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKN 2128
Query: 6469 ILKKFICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFL 6648
ILKKFIC+ADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQ GNHQ V LPSSLPEH FL
Sbjct: 2129 ILKKFICIADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQCGNHQQVQLPSSLPEHQFL 2188
Query: 6649 NDLEPLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYK 6828
+DLEPLGW+HTQPNELPQLSPQDVT H+R+LENNKQWD EKCIILTCSFTPGSCSLTSYK
Sbjct: 2189 DDLEPLGWIHTQPNELPQLSPQDVTFHTRVLENNKQWDAEKCIILTCSFTPGSCSLTSYK 2248
Query: 6829 LTQTGYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHT 7008
LTQ GYEWGRLNKD GSNPHGYLPTHYEKVQMLLSDRF GFYMVPE+GPWNY+F G HT
Sbjct: 2249 LTQAGYEWGRLNKDTGSNPHGYLPTHYEKVQMLLSDRFFGFYMVPENGPWNYNFMGANHT 2308
Query: 7009 LSMKYSVKLGSPKEFYHEEHRPTHFLEFSNMEEADITEGDREDTF 7143
+S+ YS+ LG+PKE+YH+ HRPTHFL+FS MEE + DR+D+F
Sbjct: 2309 VSINYSLTLGTPKEYYHQVHRPTHFLQFSKMEEDG--DLDRDDSF 2351
>gb|AAC61776.1| splicing factor Prp8 [Homo sapiens]
Length = 2335
Score = 3982 bits (10328), Expect = 0.0
Identities = 1878/2322 (80%), Positives = 2084/2322 (88%), Gaps = 1/2322 (0%)
Frame = +1
Query: 181 WMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRLVFFSSFSTISKYSLLDNYFLARDH 360
W QL +KRY +KRKFGFV+ QKEDMPPEHVRKIIR DH
Sbjct: 37 WQQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIR-----------------------DH 73
Query: 361 GDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIP 540
GDM+++KFRHDKRVYLGALK++PHAV KLLENMPMPWEQ+RDV VLYHITGAI+FVNEIP
Sbjct: 74 GDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIP 133
Query: 541 WVVEPIYMAQWGTMWIXXXXXXXXXXXXXXXXXXXXXXXXXXLDYADNLLDVDPLEPIQL 720
WV+EP+Y++QWG+MWI LDYADN+LDV+PLE IQL
Sbjct: 134 WVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQL 193
Query: 721 ELDEEEDSAVHTWFYDHKPLVKT-KLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRN 897
ELD EED+ V WFYDH+PL + K +NG +Y+RW +LP+M+TL+RLA QLL+DL+D N
Sbjct: 194 ELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDN 253
Query: 898 YFYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYR 1077
YFYLFD+ +FFT+KALNM IPGGPKFEPL RD+ DEDWNEFNDINK+IIR P+RTEY+
Sbjct: 254 YFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYK 313
Query: 1078 IAFPHLYNNRPRKVKLCVYHSPMIMYIKTEDPDLPAFYYDPLIHPISNTNKEKRERKVYD 1257
IAFP+LYNN P V L YH+P +++IKTEDPDLPAFY+DPLI+PIS+ + K + + D
Sbjct: 314 IAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPD 373
Query: 1258 DEDDFALPEGVEPLLRDTQLYTDTTAAGISLLFAPRPFNMRSGRTRRAEDIPLVSEWFKE 1437
D+++F LPE VEP L+DT LYTD TA GI+LL+APRPFN+RSGRTRRA DIPLV W++E
Sbjct: 374 DDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYRE 433
Query: 1438 HCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVG 1617
HCP PVKVRVSYQKLLK YVLN L HRPPKAQKK++LFRS ATKFFQST+LDWVEVG
Sbjct: 434 HCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVG 493
Query: 1618 LQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRL 1797
LQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCRE+LRL
Sbjct: 494 LQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRL 553
Query: 1798 TKLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIY 1977
TKLVVD++VQ+RLGNVDAFQLADGLQYIF+HVGQLTGMYRYKY+LMRQIRMCKDLKHLIY
Sbjct: 554 TKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIY 613
Query: 1978 YRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVT 2157
YRFNTGPVGKGPGCGFWA WRVWLFF+RGI PLLERWLGNLLARQFEGRHSKGVAKTVT
Sbjct: 614 YRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVT 673
Query: 2158 KQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPV 2337
KQRVESHFDLELRAAVMHD+LD MPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLP
Sbjct: 674 KQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPT 733
Query: 2338 PIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHN 2517
PIENMILRYVK+KADWWTN AHYNRERIRRGATVDKTVC+KNLGRLTRL+LKAEQERQHN
Sbjct: 734 PIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHN 793
Query: 2518 YLKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVA 2697
YLKDGPY+T EEA+A+YTTTVHWLESR+FSPIPFPPLSYKHDTKLLILALERLKE+YSV
Sbjct: 794 YLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVK 853
Query: 2698 VRLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEIEP 2877
RLNQ QREELGLIEQAYDNPHEALSRIKRHLLTQR FKEVGIEFMDLYS+L+PVY++EP
Sbjct: 854 SRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEP 913
Query: 2878 LEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQC 3057
LEKITDAYLDQYLWYE DKR LFP WIKPAD+EPPPLLVYKWCQGINNLQ +W+T +G+C
Sbjct: 914 LEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGEC 973
Query: 3058 VVMLQTKFEKFFEKIDXXXXXXXXXXXXDHNIADYVSAKNNVVLSYKDMSHTNSYGLIRG 3237
VML+++FEK +EKID DHNIADY++AKNNVV++YKDM+HTNSYG+IRG
Sbjct: 974 NVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRG 1033
Query: 3238 LQFASFVVQFYXXXXXXXXXXXTRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRYID 3417
LQFASF+VQ+Y RASE+AGPPQMPN+F++F D E HPIRL+ RYID
Sbjct: 1034 LQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEAAHPIRLFCRYID 1093
Query: 3418 KVHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSV 3597
++HI F+FT +EARDLIQRYLTEHPDPNNEN+VGYNNKKCWPRDARMRLMKHDVNLGR+V
Sbjct: 1094 RIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAV 1153
Query: 3598 FWDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDG 3777
FWD+KNRLPRS+TT++WEN FVSVYSKDNPNLLF+MCGFE RILPK R + E F++ KDG
Sbjct: 1154 FWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTH-KDG 1212
Query: 3778 VWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMT 3957
VWNLQNE TKERTA FLRVDDE M+ F NRVRQILM+SGSTTFTKIVNKWNTALIGLMT
Sbjct: 1213 VWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMT 1272
Query: 3958 YFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGH 4137
YFREA V+TQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPV+FYTPKE+GGLGMLSMGH
Sbjct: 1273 YFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGH 1332
Query: 4138 ILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALK 4317
+LIPQSDLR+SKQTDVG+THFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALK
Sbjct: 1333 VLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALK 1392
Query: 4318 RQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNP 4497
RQEA AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNP
Sbjct: 1393 RQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNP 1452
Query: 4498 FWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEES 4677
FWWTHQRHDGKLWNLNNYRTD+IQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEES
Sbjct: 1453 FWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEES 1512
Query: 4678 MKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKIS 4857
MK+KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKIS
Sbjct: 1513 MKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKIS 1572
Query: 4858 LIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLF 5037
LIQIFRAHLWQKIHES+VMDLCQV DQELDALEIETVQKETIHPRKSYKMNSSCAD+LLF
Sbjct: 1573 LIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLF 1632
Query: 5038 AAHKWPMSKPSLVAESKDMFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNM 5217
A++KW +S+PSL+A+SKD+ D + KYWID+QLRWGDYDSHDIERY RAKF+DYTTDNM
Sbjct: 1633 ASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNM 1692
Query: 5218 SIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQ 5397
SIYPSPTGV+I +DLAYNLHSA+GNWFPGSKPL+ QAM KIMK+NPALYVLRERIRKGLQ
Sbjct: 1693 SIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQ 1752
Query: 5398 LYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNP 5577
LYSSEPTEPYLSSQNYGE+FSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNP
Sbjct: 1753 LYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNP 1812
Query: 5578 RTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPL 5757
RTGQLFLK+IHTSVWAGQKRLGQLAKWKTAEEVAAL+RSLPVEEQPKQIIVTRKGMLDPL
Sbjct: 1813 RTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPL 1872
Query: 5758 EVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISPYTA 5937
EVHLLDFPNIVIKGSELQLPFQACLK+EKFGDLILKATEPQMVLFN+YDDWLK+IS YTA
Sbjct: 1873 EVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 1932
Query: 5938 FSRLILILRALHVNNEKAKMLLKPDKSVVTEPHHIWPSLTDDQWMKVEVALRDLILSDYA 6117
FSRLILILRALHVNN++AK++LKPDK+ +TEPHHIWP+LTD++W+KVEV L+DLIL+DY
Sbjct: 1933 FSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYG 1992
Query: 6118 KKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGD 6297
KKNNVN ++LTQSEIRDIILG EI+ PSQQRQQIAEIEKQ KE SQLTA TRT N HGD
Sbjct: 1993 KKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGD 2052
Query: 6298 ELIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILK 6477
E+I +TTS YE F SKT+WRVRAISA NL+LR NHIYV+SDDIKETGYTYI+PKN+LK
Sbjct: 2053 EIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLK 2112
Query: 6478 KFICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFLNDL 6657
KFIC++DLR QIAGYLYG+SPPDNPQVKEIRC+VMVPQWG HQ VHLP LP+H++L ++
Sbjct: 2113 KFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEM 2172
Query: 6658 EPLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQ 6837
EPLGW+HTQPNE PQLSPQDVT+H++I+ +N WDGEK II+TCSFTPGSC+LT+YKLT
Sbjct: 2173 EPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTP 2232
Query: 6838 TGYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHTLSM 7017
+GYEWGR N D G+NP GYLP+HYE+VQMLLSDRFLGF+MVP WNY+F GV+H +M
Sbjct: 2233 SGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNM 2292
Query: 7018 KYSVKLGSPKEFYHEEHRPTHFLEFSNMEEADITEGDREDTF 7143
KY ++L +PKEFYHE HRP+HFL F+ ++E ++ DRED +
Sbjct: 2293 KYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLY 2334
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 140
effective length of database: 241,722,101
effective search space used: 561036996421
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)