BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.17507.C1
(1864 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201558.1| putative protein; protein id: At5g67570.1 ... 828 0.0
dbj|BAB93320.1| OJ1117_G01.3 [Oryza sativa (japonica cultiv... 372 e-101
ref|NP_174349.1| hypothetical protein; protein id: At1g3061... 338 1e-91
ref|NP_195906.1| putative protein; protein id: At5g02860.1 ... 117 5e-25
ref|NP_566237.1| expressed protein; protein id: At3g04760.1... 109 1e-22
>ref|NP_201558.1| putative protein; protein id: At5g67570.1 [Arabidopsis
thaliana]|gi|9757878|dbj|BAB08465.1|
gb|AAD25748.1~gene_id:K9I9.14~similar to unknown protein
[Arabidopsis thaliana]
Length = 505
Score = 828 bits (2139), Expect(2) = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Frame = +2
Query: 638 FVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLS 817
FVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLS
Sbjct: 98 FVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLS 157
Query: 818 VLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTK 997
VLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTK
Sbjct: 158 VLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTK 217
Query: 998 LTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAM 1177
LTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAM
Sbjct: 218 LTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAM 277
Query: 1178 EVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVI 1357
EVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVI
Sbjct: 278 EVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVI 337
Query: 1358 GTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMA 1537
GTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMA
Sbjct: 338 GTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMA 397
Query: 1538 IFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEA 1717
IFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEA
Sbjct: 398 IFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEA 457
Query: 1718 SARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKVTNLCLV 1861
SARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKVTNLCLV
Sbjct: 458 SARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKVTNLCLV 505
Score = 111 bits (277), Expect(2) = 0.0
Identities = 60/98 (61%), Positives = 60/98 (61%)
Frame = +1
Query: 346 MVGNPWEGIERVKLKELVSGVRREEVSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 525
MVGNPWEGIERVKLKELVSGVRREEVSAG
Sbjct: 1 MVGNPWEGIERVKLKELVSGVRREEVSAGELKKENLKELKKILEKDLRWVLDDDVDVEEF 60
Query: 526 XXXXXXXPAKRWRNEGEAVRVLVDRLSGREINEKHWKF 639
PAKRWRNEGEAVRVLVDRLSGREINEKHWKF
Sbjct: 61 DLDKEFDPAKRWRNEGEAVRVLVDRLSGREINEKHWKF 98
>dbj|BAB93320.1| OJ1117_G01.3 [Oryza sativa (japonica
cultivar-group)]|gi|21644630|dbj|BAC01189.1| P0485G01.23
[Oryza sativa (japonica cultivar-group)]
Length = 1045
Score = 372 bits (954), Expect = e-101
Identities = 183/408 (44%), Positives = 272/408 (65%), Gaps = 7/408 (1%)
Frame = +2
Query: 638 FVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLS 817
F +M++ + ++F++ +L++V LGR +WK+ VV W+ S ++ K +SR++YT +L
Sbjct: 463 FSKMIHDAKIKFSDHSILRVVQILGRYGNWKRVLQVVEWLQSRERFKSYKSRYIYTTVLD 522
Query: 818 VLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTK 997
VLG A+RP EAL +F ML YPDMAAYHCIAVTLGQ+GL+KEL VI+RMR P K
Sbjct: 523 VLGKAKRPFEALNVFYTMLDQLSSYPDMAAYHCIAVTLGQSGLVKELFDVIDRMRSPPKK 582
Query: 998 LTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAM 1177
+ Q NWDP LEPDL+VYNA+LNACV QW+ WV +L++ +RP TYGL M
Sbjct: 583 FKLSPIQ-NWDPRLEPDLIVYNAVLNACVQQKQWEGAFWVLQQLKEKNIRPTNTTYGLVM 641
Query: 1178 EVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVI 1357
EVML GK++ V++FF K++ + P + YKVL+ ALWREGKI+EAV AV+ ME +G++
Sbjct: 642 EVMLVCGKYNLVYEFFNKVEKT-SIPGTLNYKVLINALWREGKIDEAVMAVKGMESRGIV 700
Query: 1358 GTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMA 1537
G+ S+YY+LA CLC+ GR +A+L+V ++ ++ N +PL +T+TGLI ++ G +++
Sbjct: 701 GSASLYYDLARCLCSGGRCKEALLQVEKICKVAN-KPLVVTYTGLIQTCIDNGSMENAKY 759
Query: 1538 IFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVS-------RKETHLVPNEYT 1696
IF M C PN T N+MLK Y + MF +AK+L E I+S + +++T
Sbjct: 760 IFDEMCKYCSPNNITCNIMLKSYTEHGMFEDAKDLLENILSGRIRSKVESSQKAIADKFT 819
Query: 1697 YSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGK 1840
++ +EA A + +W FE+ ++ M+ SGY D+ +H M+++A R GK
Sbjct: 820 FNIFMEACAEAKRWNDFEYAFRKMLSSGYHFDERRHLRMVLDAYRNGK 867
>ref|NP_174349.1| hypothetical protein; protein id: At1g30610.1 [Arabidopsis
thaliana]|gi|25403359|pir||D86431 protein T5I8.6
[imported] - Arabidopsis
thaliana|gi|4587517|gb|AAD25748.1|AC007060_6 T5I8.6
[Arabidopsis thaliana]
Length = 1006
Score = 338 bits (868), Expect = 1e-91
Identities = 177/437 (40%), Positives = 264/437 (59%), Gaps = 36/437 (8%)
Frame = +2
Query: 638 FVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLS 817
F + + + +++T+ +++++ LG+ +W++ V+ W+ + K + R +YT L+
Sbjct: 456 FSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALN 515
Query: 818 VLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTK 997
VLG +RRP EAL +F+ ML YPDM AY IAVTLGQAG +KEL VI+ MR P K
Sbjct: 516 VLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKK 575
Query: 998 LTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAM 1177
K + WDP LEPD+VVYNA+LNACV QW+ WV +L++ G +P+ TYGL M
Sbjct: 576 KFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIM 635
Query: 1178 EVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVI 1357
EVML K++ VH+FFRKM+ S P A+ Y+VLV LW+EGK +EAV V DME +G++
Sbjct: 636 EVMLACEKYNLVHEFFRKMQKS-SIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIV 694
Query: 1358 GTGSVYYELACCLCNNGRWCDAMLEVG-----RMKRLEN------------------CR- 1465
G+ ++YY+LA CLC+ GR + + V +K +EN CR
Sbjct: 695 GSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRV 754
Query: 1466 ---PLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAK 1636
PL +T+TGLI A ++ G++ + IF MK C PN+ T N+MLK Y + +F EA+
Sbjct: 755 ANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEAR 814
Query: 1637 ELFEEI---------VSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQM 1789
ELF+++ S E+ ++P+ YT++ ML+ A +W+ F + Y+ M+ GY
Sbjct: 815 ELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHF 874
Query: 1790 DQTKHASMLIEASRAGK 1840
+ +H M++EASRAGK
Sbjct: 875 NAKRHLRMVLEASRAGK 891
>ref|NP_195906.1| putative protein; protein id: At5g02860.1 [Arabidopsis
thaliana]|gi|11357908|pir||T48307 hypothetical protein
F9G14.170 - Arabidopsis
thaliana|gi|7413561|emb|CAB86040.1| putative protein
[Arabidopsis thaliana]
Length = 819
Score = 117 bits (294), Expect = 5e-25
Identities = 100/411 (24%), Positives = 175/411 (42%), Gaps = 23/411 (5%)
Frame = +2
Query: 674 TEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVLGFARRPQEAL 853
T ++L + LG + + A W K + + V ++S+LG R A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 854 QIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQ---KPTKLTKN----- 1009
+FN + D D+ +Y + +G +E + V ++M + KPT +T N
Sbjct: 194 NMFNGLQEDG-FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNV 252
Query: 1010 -------------LRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRP 1150
L +K + PD YN ++ C + + VF E++ G
Sbjct: 253 FGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY 312
Query: 1151 NGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAV 1330
+ TY ++V +S + +M +G +P +TY L+ A R+G ++EA+E
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 1331 RDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLN 1510
M +KG Y L G+ ++ + + R C+P TF I N
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGK-VESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 1511 GGHVDDCMAIFQYMKDKC--DPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVP 1684
G + M IF + + C P+I T N +L V+G+N M SE +F+E+ K VP
Sbjct: 432 RGKFTEMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM---KRAGFVP 487
Query: 1685 NEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAG 1837
T++ ++ A +R +E VY+ M+ +G D + + ++L +R G
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Score = 90.5 bits (223), Expect = 8e-17
Identities = 89/408 (21%), Positives = 163/408 (39%), Gaps = 27/408 (6%)
Frame = +2
Query: 650 MNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVLGF 829
M +G + + ++D G+ K+A V++ + + + Y L+S
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI---VTYNSLISAYAR 361
Query: 830 ARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQ---KPTKL 1000
EA+++ NQM ++ PD+ Y + +AG ++ + + E MR KP
Sbjct: 362 DGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 1001 TKNL-------------RQKNWDPV----LEPDLVVYNAILNACVPTLQWKAVSWVFVEL 1129
T N K +D + L PD+V +N +L VS VF E+
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 1130 RKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKI 1309
++ G P T+ + G F++ +R+M +G P TY ++ AL R G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 1310 EEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLEN------CRPL 1471
E++ + + +ME Y L N E+G M L P
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANG-------KEIGLMHSLAEEVYSGVIEPR 593
Query: 1472 EITFTGLIAASLNGGHVDDCMAIFQYMKDK-CDPNIGTANMMLKVYGRNDMFSEAKELFE 1648
+ L+ + + F +K++ P+I T N M+ +YGR M ++A + +
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD 653
Query: 1649 EIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMD 1792
+ KE P+ TY+ ++ +RS + E + + ++ G + D
Sbjct: 654 YM---KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Score = 79.3 bits (194), Expect = 2e-13
Identities = 89/392 (22%), Positives = 156/392 (39%), Gaps = 37/392 (9%)
Frame = +2
Query: 626 SIGSFVRMMNQSGLQFTEDQMLKIVDRLG------RKQSWKQASAV---------VHWVY 760
+ +F++M G +FTE M+KI D + +W AV V V+
Sbjct: 421 TFNAFIKMYGNRG-KFTE--MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 761 SDKKRK-HLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQ 937
+ KR + R + L+S ++A+ ++ +ML D + PD++ Y+ + L +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAALAR 536
Query: 938 AGLLKELLKVIERM---RQKPTKLT-----------------KNLRQKNWDPVLEPDLVV 1057
G+ ++ KV+ M R KP +LT +L ++ + V+EP V+
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 1058 YNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMK 1237
++ C F EL++ G P+ T + + + + MK
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 1238 SSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWC 1417
G P TY L+ R ++ E +R++ KG+ Y + C N R
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 1418 DAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYM-KDKCDPNIGTANMM 1594
DA M+ P IT+ I + ++ + + +YM K C PN T N +
Sbjct: 717 DASRIFSEMRN-SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 1595 LKVYGRNDMFSEAKELFEEIVSRKETHLVPNE 1690
+ Y + + EAK LF E + + H E
Sbjct: 776 VDGYCKLNRKDEAK-LFVEDLRNLDPHAPKGE 806
>ref|NP_566237.1| expressed protein; protein id: At3g04760.1, supported by cDNA:
gi_15810358 [Arabidopsis
thaliana]|gi|6175176|gb|AAF04902.1|AC011437_17
hypothetical protein [Arabidopsis
thaliana]|gi|15810359|gb|AAL07067.1| unknown protein
[Arabidopsis thaliana]|gi|22136960|gb|AAM91709.1| unknown
protein [Arabidopsis thaliana]
Length = 602
Score = 109 bits (273), Expect = 1e-22
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 1/342 (0%)
Frame = +2
Query: 800 YTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERM 979
YT L+ EAL++ ++ML R L PDM Y+ I G+ KE M
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYNTII-----RGMCKE------GM 278
Query: 980 RQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGA 1159
+ ++ +NL K EPD++ YN +L A + +W+ + ++ PN
Sbjct: 279 VDRAFEMVRNLELKG----CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 1160 TYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDM 1339
TY + + + GK + + + MK G P A +Y L+ A REG+++ A+E + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 1340 EQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGG- 1516
G + Y + LC NG+ A+ G++ + C P ++ + +A + G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNTMFSALWSSGD 453
Query: 1517 HVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYT 1696
+ I + M + DP+ T N M+ R M EA FE +V + P+ T
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA---FELLVDMRSCEFHPSVVT 510
Query: 1697 YSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIE 1822
Y+ +L ++ + E +V ++MV +G + ++T + ++LIE
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY-TVLIE 551
Score = 100 bits (248), Expect = 1e-19
Identities = 97/436 (22%), Positives = 174/436 (39%), Gaps = 36/436 (8%)
Frame = +2
Query: 644 RMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVL 823
R + L F + QMLKI R R ++ ++ +H + + ++ + + TKL+
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIES---LHLLETMVRKGYNPDVILCTKLIKGF 134
Query: 824 GFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLT 1003
R +A+++ + ++ PD+ AY+ + + + + +V++RMR K
Sbjct: 135 FTLRNIPKAVRVMEIL--EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD---- 188
Query: 1004 KNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEV 1183
PD V YN ++ + + V +L + +P TY + +E
Sbjct: 189 -----------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEA 237
Query: 1184 MLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGT 1363
+ G D +M S G P TY ++R + +EG ++ A E VR++E KG
Sbjct: 238 TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPD 297
Query: 1364 GSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIF 1543
Y L L N G+W + + +M E C P +T++ LI G +++ M +
Sbjct: 298 VISYNILLRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 1544 QYMKDK------------------------------------CDPNIGTANMMLKVYGRN 1615
+ MK+K C P+I N +L +N
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 1616 DMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQ 1795
+A E+F ++ E PN +Y+ M A S H+ M+ +G D+
Sbjct: 417 GKADQALEIFGKL---GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 1796 TKHASMLIEASRAGKV 1843
+ SM+ R G V
Sbjct: 474 ITYNSMISCLCREGMV 489
Score = 100 bits (248), Expect = 1e-19
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
Frame = +2
Query: 1040 EPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHD 1219
+PD+ YNA++N + + V +R P+ TY + + + GK D
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 1220 FFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLC 1399
++ S P ITY +L+ A EG ++EA++ + +M +G+ Y + +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 1400 NNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYM-KDKCDPNI 1576
G D E+ R L+ C P I++ L+ A LN G ++ + M +KCDPN+
Sbjct: 275 KEG-MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 1577 GTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHV 1756
T ++++ R+ EA L + + KE L P+ Y+Y ++ A R + +
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLM---KEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 1757 YQTMVLSGYQMDQTKHASMLIEASRAGK 1840
+TM+ G D + ++L + GK
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGK 418
Score = 68.6 bits (166), Expect = 3e-10
Identities = 64/267 (23%), Positives = 110/267 (40%), Gaps = 20/267 (7%)
Frame = +2
Query: 800 YTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERM 979
Y LL L + +E ++ +M ++ P++ Y + TL + G ++E + +++ M
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 980 RQKPTK---------LTKNLRQKNWDPVLE-----------PDLVVYNAILNACVPTLQW 1099
++K + R+ D +E PD+V YN +L +
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 1100 KAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVL 1279
+F +L + G PN ++Y + SG R +M S+G P ITY +
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 1280 VRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLEN 1459
+ L REG ++EA E + DM + Y + C R DA+ + M
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG-NG 538
Query: 1460 CRPLEITFTGLIAASLNGGHVDDCMAI 1540
CRP E T+T LI G+ + M +
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMEL 565
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 129
effective length of database: 256,451,607
effective search space used: 125917739037
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)