BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BT001006.f
(1788 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201554.1| peptidylprolyl isomerase (cyclophilin)-lik... 1001 0.0
gb|AAL32594.1| peptidylprolyl isomerase (cyclophilin)-like ... 997 0.0
ref|NP_611113.1| CG7747-PA [Drosophila melanogaster]|gi|730... 358 2e-97
gb|AAH44993.1| Similar to peptidylprolyl isomerase (cycloph... 344 3e-93
ref|NP_055152.1| peptidylprolyl isomerase (cyclophilin)-lik... 326 8e-88
>ref|NP_201554.1| peptidylprolyl isomerase (cyclophilin)-like; protein id: At5g67530.1,
supported by cDNA: gi_17063169, supported by cDNA:
gi_17064879, supported by cDNA: gi_20259895 [Arabidopsis
thaliana]|gi|9757874|dbj|BAB08461.1| peptidylprolyl
isomerase (cyclophilin)-like [Arabidopsis
thaliana]|gi|17063170|gb|AAL32981.1| AT5g67530/K9I9_9
[Arabidopsis thaliana]|gi|24111273|gb|AAN46760.1|
At5g67530/K9I9_9 [Arabidopsis thaliana]
Length = 595
Score = 1001 bits (2587), Expect = 0.0
Identities = 501/595 (84%), Positives = 501/595 (84%)
Frame = +1
Query: 1 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV 180
MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV
Sbjct: 1 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV 60
Query: 181 FEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK 360
FEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK
Sbjct: 61 FEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK 120
Query: 361 TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK 540
TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK
Sbjct: 121 TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK 180
Query: 541 IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNERXXXXXXXL 720
IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNER L
Sbjct: 181 IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNERAAAIAAIL 240
Query: 721 ESRSKIKEVSKAEQPKQTYSVVDAASASVFGRXXXXXXXXXXXXXXXRIAMHMAGDRTPV 900
ESRSKIKEVSKAEQPKQTYSVVDAASASVFGR RIAMHMAGDRTPV
Sbjct: 241 ESRSKIKEVSKAEQPKQTYSVVDAASASVFGRSADAAKAGSSDKTAARIAMHMAGDRTPV 300
Query: 901 NSKMVKSRYXXXXXXXXXXXXXXXPVTKNDFELIKVEKNPKKKGYVQFQTTHGDLNIELH 1080
NSKMVKSRY PVTKNDFELIKVEKNPKKKGYVQFQTTHGDLNIELH
Sbjct: 301 NSKMVKSRYSSGAASRSFTSSAFTPVTKNDFELIKVEKNPKKKGYVQFQTTHGDLNIELH 360
Query: 1081 CDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXXXESIWGKPFKDEPNS 1260
CDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQ ESIWGKPFKDEPNS
Sbjct: 361 CDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEPNS 420
Query: 1261 KLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTXXXXXXXXLATLAAMENVPVD 1440
KLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHT LATLAAMENVPVD
Sbjct: 421 KLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVD 480
Query: 1441 ESDRPLEEIKIIEASVFVNPYTXXXXXXXXXXXXXXXXXXXXXXXIGSWYSNPXXXXXXX 1620
ESDRPLEEIKIIEASVFVNPYT IGSWYSNP
Sbjct: 481 ESDRPLEEIKIIEASVFVNPYTELDEEEEKEKAEKEKNEDKDIEKIGSWYSNPGSGTTEA 540
Query: 1621 XXXXXXXXKYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFSSW 1785
KYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFSSW
Sbjct: 541 GAGGGGVGKYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFSSW 595
>gb|AAL32594.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis
thaliana]|gi|20259896|gb|AAM13295.1| peptidylprolyl
isomerase (cyclophilin)-like [Arabidopsis thaliana]
Length = 595
Score = 997 bits (2578), Expect = 0.0
Identities = 500/595 (84%), Positives = 500/595 (84%)
Frame = +1
Query: 1 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV 180
MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV
Sbjct: 1 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV 60
Query: 181 FEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK 360
FEITTIVPYIRKFGKH VTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK
Sbjct: 61 FEITTIVPYIRKFGKHHVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK 120
Query: 361 TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK 540
TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK
Sbjct: 121 TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK 180
Query: 541 IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNERXXXXXXXL 720
IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNER L
Sbjct: 181 IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNERAAAIAAIL 240
Query: 721 ESRSKIKEVSKAEQPKQTYSVVDAASASVFGRXXXXXXXXXXXXXXXRIAMHMAGDRTPV 900
ESRSKIKEVSKAEQPKQTYSVVDAASASVFGR RIAMHMAGDRTPV
Sbjct: 241 ESRSKIKEVSKAEQPKQTYSVVDAASASVFGRSADAAKAGSSDKTAARIAMHMAGDRTPV 300
Query: 901 NSKMVKSRYXXXXXXXXXXXXXXXPVTKNDFELIKVEKNPKKKGYVQFQTTHGDLNIELH 1080
NSKMVKSRY PVTKNDFELIKVEKNPKKKGYVQFQTTHGDLNIELH
Sbjct: 301 NSKMVKSRYSSGAASRSFTSSAFTPVTKNDFELIKVEKNPKKKGYVQFQTTHGDLNIELH 360
Query: 1081 CDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXXXESIWGKPFKDEPNS 1260
CDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQ ESIWGKPFKDEPNS
Sbjct: 361 CDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEPNS 420
Query: 1261 KLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTXXXXXXXXLATLAAMENVPVD 1440
KLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHT LATLAAMENVPVD
Sbjct: 421 KLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVD 480
Query: 1441 ESDRPLEEIKIIEASVFVNPYTXXXXXXXXXXXXXXXXXXXXXXXIGSWYSNPXXXXXXX 1620
ESDRPLEEIKIIEASVFVNPYT IGSWYSNP
Sbjct: 481 ESDRPLEEIKIIEASVFVNPYTELDEEEEKEKAEKEKNEDKDIEKIGSWYSNPGSGTTEA 540
Query: 1621 XXXXXXXXKYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFSSW 1785
KYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFSSW
Sbjct: 541 GAGGGGVGKYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFSSW 595
>ref|NP_611113.1| CG7747-PA [Drosophila melanogaster]|gi|7302948|gb|AAF58019.1|
CG7747-PA [Drosophila
melanogaster]|gi|16769248|gb|AAL28843.1| LD20635p
[Drosophila melanogaster]
Length = 517
Score = 358 bits (918), Expect = 2e-97
Identities = 200/509 (39%), Positives = 274/509 (53%), Gaps = 8/509 (1%)
Frame = +1
Query: 1 MGKKQHSKDRMFITKTEWATEWGGAK--SKEN-RTPFKSLPYYCCALTFLPFEDPVCTID 171
MGK+QH KD+M++T TEW+ +GG K S EN FK LP+ C +T P+E P C +
Sbjct: 1 MGKRQHQKDKMYLTYTEWSELYGGKKVESLENDHVKFKRLPFEHCCITMAPYEMPYCDLQ 60
Query: 172 GSVFEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIV 351
G+VFE I+ +++ F +P+TG + + L+ L FH+N+ EYHCP L K F++ +HIV
Sbjct: 61 GNVFEYEAILKFLKTFKVNPITGQKMDSKSLVKLNFHRNANDEYHCPALFKPFSKNSHIV 120
Query: 352 AVKTTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKN 531
AV TTGNV+C+EAI +LNIKTKNWK+L+ + PF R D+ITIQ+P ++ F H+K
Sbjct: 121 AVATTGNVYCWEAIDQLNIKTKNWKDLVDDTPFQRKDIITIQDPQKLEKYDISTFYHIKK 180
Query: 532 GLKIDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNERXXXXX 711
L++ EE ++ +PA SG IK M
Sbjct: 181 NLRVLTEEEQQERKNPA-----SGRIKTM------------------------------- 204
Query: 712 XXLESRSKIKEVSKAEQPKQTYSVVDAASASVFGRXXXXXXXXXXXXXXXRIAMHMAGDR 891
LE++ ++++ + QP + + +A F
Sbjct: 205 -NLETKETLEQLQQDYQPAEEEASTSKRTADKFN-------------------------- 237
Query: 892 TPVNSKMVKSRYXXXXXXXXXXXXXXXPVTK-----NDFELIKVEKNPKKKGYVQFQTTH 1056
+ Y PV++ D +L+K E+ KKKGYV+ T
Sbjct: 238 --------AAHYSTGAVAASFTSTAMVPVSQIEAAIIDDDLVKYER-VKKKGYVRLNTNL 288
Query: 1057 GDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXXXESIWGK 1236
G LN+EL CD PRAC+NFI C GYYN V FHRSIRNF++Q ESIWGK
Sbjct: 289 GPLNLELFCDQTPRACDNFIKHCANGYYNNVMFHRSIRNFIVQGGDPTGSGSGGESIWGK 348
Query: 1237 PFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTXXXXXXXXLATLA 1416
F+DE L H+GRGV+SMANSGP+TNGSQFF+ Y+S HL+ KHT L TL
Sbjct: 349 KFEDEFKPNLTHTGRGVLSMANSGPNTNGSQFFITYRSCKHLDGKHTIFGKLVGGLDTLQ 408
Query: 1417 AMENVPVDESDRPLEEIKIIEASVFVNPY 1503
MEN+ VD DRP+E+I I + VFVNP+
Sbjct: 409 KMENIEVDNKDRPIEDIIIESSQVFVNPF 437
>gb|AAH44993.1| Similar to peptidylprolyl isomerase (cyclophilin)-like 2 [Xenopus
laevis]
Length = 521
Score = 344 bits (882), Expect = 3e-93
Identities = 212/600 (35%), Positives = 297/600 (49%), Gaps = 5/600 (0%)
Frame = +1
Query: 1 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV 180
MGK+QH KD+M+IT TE+ +GG + + F+ LP+ C+L+ PFE PVCT DG V
Sbjct: 1 MGKRQHQKDKMYITCTEYTHFYGGKRPDIPKANFRRLPFDHCSLSLQPFEYPVCTPDGIV 60
Query: 181 FEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK 360
F++ +IVP+I+K+G +P+TG L+ + LI L F KN +G+YHCPVL VFT+ +HIVAV
Sbjct: 61 FDLLSIVPWIKKYGTNPITGEKLEAKSLIKLNFAKNQDGKYHCPVLFSVFTKNSHIVAVS 120
Query: 361 TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK 540
TGNVF EA+++LNIK K++K+LLT+EPFTR D+IT+Q
Sbjct: 121 KTGNVFSNEAVEQLNIKPKSYKDLLTDEPFTRQDIITLQ--------------------- 159
Query: 541 IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNERXXXXXXXL 720
D +L K N Y+ V ++K + D +KA++ + +
Sbjct: 160 -DPSQLDKFNVSNFYH--VKNNLK--VTDPDEEKARQ------------DPSYYLKNANM 202
Query: 721 ESRSKIKEVSKAEQPKQTYSVVDAASASVFGRXXXXXXXXXXXXXXXRIAMHMAGDRTPV 900
E+R + E+ + +A M G
Sbjct: 203 ETRETLSELYR------------------------------DFKGDAMLAATMKGPEKKT 232
Query: 901 NSKMVKSRYXXXXXXXXXXXXXXXPVTKNDFELIKVE----KNPKKKGYVQFQTTHGDLN 1068
K+ + Y P T ++ I + + KKKGYV+ T GDLN
Sbjct: 233 TDKLNAAHYSTGAVSASFTSTAMTPETTHEAAAIAEDTVRYQYVKKKGYVRLHTNKGDLN 292
Query: 1069 IELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXXXESIWGKPFKD 1248
+EL+CD P+ CENFI LC++ YY+G FHRSIRNF+IQ ES WGKPFKD
Sbjct: 293 LELYCDKTPKTCENFIKLCKKNYYDGTIFHRSIRNFVIQGGDPTGTGTGGESFWGKPFKD 352
Query: 1249 EPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTXXXXXXXXLATLAAMEN 1428
E L H+GRGV+SMAN+GP+TN SQFF+ ++S T+L+ KHT T++AME
Sbjct: 353 EIKPNLSHTGRGVLSMANTGPNTNKSQFFITFRSCTYLDKKHTVFGRVVGGFDTVSAMEK 412
Query: 1429 VPVD-ESDRPLEEIKIIEASVFVNPYTXXXXXXXXXXXXXXXXXXXXXXXIGSWYSNPXX 1605
V D ++DRP EEI+I +VFV+PY +
Sbjct: 413 VDTDHKTDRPKEEIRIECTTVFVDPYEEADAQVAAEREKTQKAEEEERIKAQALLPK-KE 471
Query: 1606 XXXXXXXXXXXXXKYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFSSW 1785
KY+ + TK S + D + SKK + T FKDFSSW
Sbjct: 472 KRQEPKTYRTGVGKYINMAA------TKRSAEDDEAGPSTSKKERVTRD----FKDFSSW 521
>ref|NP_055152.1| peptidylprolyl isomerase (cyclophilin)-like 2 isoform a;
cyclophilin-like protein CyP-60; peptidylprolyl cis-trans
isomerase [Homo sapiens]|gi|22547212|ref|NP_680480.1|
peptidylprolyl isomerase (cyclophilin)-like 2 isoform a;
cyclophilin-like protein CyP-60; peptidylprolyl cis-trans
isomerase [Homo sapiens]|gi|23813917|sp|Q13356|CYP6_HUMAN
Peptidyl-prolyl cis-trans isomerase like 2 (PPIase)
(Rotamase) (Cyclophilin-60) (Cyclophilin-like protein
Cyp-60)|gi|2134962|pir||S64705 cyclophilin-like protein
CyP-60 - human|gi|1199598|gb|AAC50376.1| cyclophilin-like
protein CyP-60|gi|1587642|prf||2207180A
cyclophilin:ISOTYPE=CyP-60
Length = 520
Score = 326 bits (835), Expect = 8e-88
Identities = 212/600 (35%), Positives = 291/600 (48%), Gaps = 5/600 (0%)
Frame = +1
Query: 1 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV 180
MGK+QH KD+M+IT E+ +GG K +T F+ LP+ C+L+ PF PVCT DG V
Sbjct: 1 MGKRQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCSLSLQPFVYPVCTPDGIV 60
Query: 181 FEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK 360
F++ IVP+++K+G +P G L G LI L F KNSEG+YHCPVL VFT THIVAV+
Sbjct: 61 FDLLNIVPWLKKYGTNPSNGEKLDGRSLIKLNFSKNSEGKYHCPVLFTVFTNNTHIVAVR 120
Query: 361 TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK 540
TTGNV+ YEA+++LNIK KN++ DL+T P + +T++
Sbjct: 121 TTGNVYAYEAVEQLNIKAKNFR-----------DLLT-DEPFSRQDIITLQ--------- 159
Query: 541 IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNERXXXXXXXL 720
D L K N Y+ V ++K + D +KAK+ +
Sbjct: 160 -DPTNLDKFNVSNFYH--VKNNMK--IIDPDEEKAKQ------------DPSYYLKNTNA 202
Query: 721 ESRSKIKEVSKAEQPKQTYSVVDAASASVFGRXXXXXXXXXXXXXXXRIAMHMAGDRTPV 900
E+R ++E+ K + + +A M
Sbjct: 203 ETRETLQELYKEFKGDEI------------------------------LAATMKAPEKKK 232
Query: 901 NSKMVKSRYXXXXXXXXXXXXXXXPVTKNDFELIKVE----KNPKKKGYVQFQTTHGDLN 1068
K+ + Y P T ++ I + + KKKGYV+ T GDLN
Sbjct: 233 VDKLNAAHYSTGKVSASFTSTAMVPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNKGDLN 292
Query: 1069 IELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXXXESIWGKPFKD 1248
+ELHCD+ P+ CENFI LC++ YY+G FHRSIRNF+IQ ES WGKPFKD
Sbjct: 293 LELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKD 352
Query: 1249 EPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTXXXXXXXXLATLAAMEN 1428
E L H+GRG++SMANSGP++N SQFF+ ++S +L+ KHT L AMEN
Sbjct: 353 EFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMEN 412
Query: 1429 VPVD-ESDRPLEEIKIIEASVFVNPYTXXXXXXXXXXXXXXXXXXXXXXXIGSWYSNPXX 1605
V D ++DRP EEI+I +VFV+PY S P
Sbjct: 413 VESDPKTDRPKEEIRIDATTVFVDPYEEADAQIAQERKTQLKVAPETKVK----SSQPQA 468
Query: 1606 XXXXXXXXXXXXXKYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFSSW 1785
KY+ + ATK S +T+ +SKK+ S GF DFSSW
Sbjct: 469 GSQGPQTFRQGVGKYI---NPAATKRAAEEEPSTSATVPMSKKK-----PSRGFGDFSSW 520
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.317 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 129
effective length of database: 256,451,607
effective search space used: 119506448862
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)