BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AF446873.f
(1119 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201549.1| putative protein; protein id: At5g67480.1,... 739 0.0
ref|NP_568031.1| putative protein; protein id: At4g37610.1,... 437 e-121
pir||T04718 hypothetical protein F19F18.100 - Arabidopsis t... 437 e-121
dbj|BAC43651.1| unknown protein [Arabidopsis thaliana] 436 e-121
gb|AAM61515.1| unknown [Arabidopsis thaliana] 434 e-120
>ref|NP_201549.1| putative protein; protein id: At5g67480.1, supported by cDNA:
gi_15529177, supported by cDNA: gi_17386119 [Arabidopsis
thaliana]|gi|9757869|dbj|BAB08456.1|
gene_id:K9I9.4~pir||T04718~strong similarity to unknown
protein [Arabidopsis thaliana]|gi|15529178|gb|AAK97683.1|
AT5g67480/K9I9_4 [Arabidopsis
thaliana]|gi|17386120|gb|AAL38606.1|AF446873_1
AT5g67480/K9I9_4 [Arabidopsis thaliana]
Length = 372
Score = 739 bits (1908), Expect = 0.0
Identities = 358/372 (96%), Positives = 358/372 (96%)
Frame = +1
Query: 1 MVTGCVDLHQSFKSADXXXXXXXXXXXXXXDGLKKKLGHSSVSTATRDMWDRLFNDGYKA 180
MVTGCVDLHQSFKSAD DGLKKKLGHSSVSTATRDMWDRLFNDGYKA
Sbjct: 1 MVTGCVDLHQSFKSADSSSVPIPPPLPSKSDGLKKKLGHSSVSTATRDMWDRLFNDGYKA 60
Query: 181 DVVIYTDNGSIIYAHANILGTASTVIKGMLKQAKRHGKWHTISIRGVPHDAVRVFIRFLY 360
DVVIYTDNGSIIYAHANILGTASTVIKGMLKQAKRHGKWHTISIRGVPHDAVRVFIRFLY
Sbjct: 61 DVVIYTDNGSIIYAHANILGTASTVIKGMLKQAKRHGKWHTISIRGVPHDAVRVFIRFLY 120
Query: 361 SSCYEKEEMNEFIMHLLLLSHAYVVPQLKRVCEWHLEHGLLTTENVVDVFQLALLCDFPR 540
SSCYEKEEMNEFIMHLLLLSHAYVVPQLKRVCEWHLEHGLLTTENVVDVFQLALLCDFPR
Sbjct: 121 SSCYEKEEMNEFIMHLLLLSHAYVVPQLKRVCEWHLEHGLLTTENVVDVFQLALLCDFPR 180
Query: 541 LSLISHRMIMKHFNELSATEAWTAMKKSHPFLEKEVRDSVIIEANTRKERMRKRNDQRIY 720
LSLISHRMIMKHFNELSATEAWTAMKKSHPFLEKEVRDSVIIEANTRKERMRKRNDQRIY
Sbjct: 181 LSLISHRMIMKHFNELSATEAWTAMKKSHPFLEKEVRDSVIIEANTRKERMRKRNDQRIY 240
Query: 721 SQLYEAMEALVHICRDGCKTIGPHDKDFKPNHATCNYEACKGLESLIRHFAGCKLRVPGG 900
SQLYEAMEALVHICRDGCKTIGPHDKDFKPNHATCNYEACKGLESLIRHFAGCKLRVPGG
Sbjct: 241 SQLYEAMEALVHICRDGCKTIGPHDKDFKPNHATCNYEACKGLESLIRHFAGCKLRVPGG 300
Query: 901 CVHCKRMWQLLELHSRVCAGSDQCRVPLCRNLKEKMEKQSKKDESRWKLLVKNVLGSKKI 1080
CVHCKRMWQLLELHSRVCAGSDQCRVPLCRNLKEKMEKQSKKDESRWKLLVKNVLGSKKI
Sbjct: 301 CVHCKRMWQLLELHSRVCAGSDQCRVPLCRNLKEKMEKQSKKDESRWKLLVKNVLGSKKI 360
Query: 1081 GGSPFFLPVTNC 1116
GGSPFFLPVTNC
Sbjct: 361 GGSPFFLPVTNC 372
>ref|NP_568031.1| putative protein; protein id: At4g37610.1, supported by cDNA: 122670.
[Arabidopsis thaliana]
Length = 368
Score = 437 bits (1124), Expect = e-121
Identities = 206/330 (62%), Positives = 260/330 (78%), Gaps = 1/330 (0%)
Frame = +1
Query: 115 HSSVSTATRDMWDRLFNDGYKADVVIYTDNGSIIYAHANILGTASTVIKGMLKQAKRHGK 294
+S VS ATRD WDR+F++ + ADV+I+TD+ +IYAH+N++G AS VI+GM+KQ KR
Sbjct: 34 NSFVSKATRDSWDRMFDEAHGADVLIHTDDNGLIYAHSNVIGMASDVIRGMMKQHKRKSH 93
Query: 295 WHTISIRGVPHDAVRVFIRFLYSSCYEKEEMNEFIMHLLLLSHAYVVPQLKRVCEWHLEH 474
+ISI GVPH A+RVFIRFLYSSCYEK++M +F +HLL+LSH YVVP LKRVCE E
Sbjct: 94 RKSISILGVPHHALRVFIRFLYSSCYEKQDMEDFAIHLLVLSHVYVVPHLKRVCESEFES 153
Query: 475 GLLTTENVVDVFQLALLCDFPRLSLISHRMIMKHFNELSATEAWTAMKKSHPFLEKEVRD 654
LL ENV+DVFQLALLCD PRL L+ HRMI+ +F E+S +E W AMK+SHP L+KE+
Sbjct: 154 SLLNKENVIDVFQLALLCDAPRLGLLCHRMILNNFEEVSTSEGWQAMKESHPRLQKELLR 213
Query: 655 SVIIEANTRKERMRKRNDQRIYSQLYEAMEALVHICRDGCKTIGPHDKDFKPNHATCNYE 834
SV E N+ K+R RK+ + + Y+QLYEAMEA VHICRDGC+ IGP + H +C ++
Sbjct: 214 SVAYELNSLKQRNRKQKEIQTYTQLYEAMEAFVHICRDGCREIGPTKTE--TPHMSCGFQ 271
Query: 835 ACKGLESLIRHFAGCKLR-VPGGCVHCKRMWQLLELHSRVCAGSDQCRVPLCRNLKEKME 1011
AC GLE L++H AGCKLR +PGGC CKRMWQLLELHSR+C S+QC+VPLC +LKE+M+
Sbjct: 272 ACNGLEQLLKHLAGCKLRSIPGGCSRCKRMWQLLELHSRICVDSEQCKVPLCSSLKERMK 331
Query: 1012 KQSKKDESRWKLLVKNVLGSKKIGGSPFFL 1101
QS+KDE RWKLLV+NVL +K+IGGSPFFL
Sbjct: 332 TQSRKDEKRWKLLVRNVLSTKRIGGSPFFL 361
>pir||T04718 hypothetical protein F19F18.100 - Arabidopsis
thaliana|gi|4468986|emb|CAB38300.1| putative protein
[Arabidopsis thaliana]|gi|7270743|emb|CAB80426.1|
putative protein [Arabidopsis thaliana]
Length = 365
Score = 437 bits (1124), Expect = e-121
Identities = 206/330 (62%), Positives = 260/330 (78%), Gaps = 1/330 (0%)
Frame = +1
Query: 115 HSSVSTATRDMWDRLFNDGYKADVVIYTDNGSIIYAHANILGTASTVIKGMLKQAKRHGK 294
+S VS ATRD WDR+F++ + ADV+I+TD+ +IYAH+N++G AS VI+GM+KQ KR
Sbjct: 31 NSFVSKATRDSWDRMFDEAHGADVLIHTDDNGLIYAHSNVIGMASDVIRGMMKQHKRKSH 90
Query: 295 WHTISIRGVPHDAVRVFIRFLYSSCYEKEEMNEFIMHLLLLSHAYVVPQLKRVCEWHLEH 474
+ISI GVPH A+RVFIRFLYSSCYEK++M +F +HLL+LSH YVVP LKRVCE E
Sbjct: 91 RKSISILGVPHHALRVFIRFLYSSCYEKQDMEDFAIHLLVLSHVYVVPHLKRVCESEFES 150
Query: 475 GLLTTENVVDVFQLALLCDFPRLSLISHRMIMKHFNELSATEAWTAMKKSHPFLEKEVRD 654
LL ENV+DVFQLALLCD PRL L+ HRMI+ +F E+S +E W AMK+SHP L+KE+
Sbjct: 151 SLLNKENVIDVFQLALLCDAPRLGLLCHRMILNNFEEVSTSEGWQAMKESHPRLQKELLR 210
Query: 655 SVIIEANTRKERMRKRNDQRIYSQLYEAMEALVHICRDGCKTIGPHDKDFKPNHATCNYE 834
SV E N+ K+R RK+ + + Y+QLYEAMEA VHICRDGC+ IGP + H +C ++
Sbjct: 211 SVAYELNSLKQRNRKQKEIQTYTQLYEAMEAFVHICRDGCREIGPTKTE--TPHMSCGFQ 268
Query: 835 ACKGLESLIRHFAGCKLR-VPGGCVHCKRMWQLLELHSRVCAGSDQCRVPLCRNLKEKME 1011
AC GLE L++H AGCKLR +PGGC CKRMWQLLELHSR+C S+QC+VPLC +LKE+M+
Sbjct: 269 ACNGLEQLLKHLAGCKLRSIPGGCSRCKRMWQLLELHSRICVDSEQCKVPLCSSLKERMK 328
Query: 1012 KQSKKDESRWKLLVKNVLGSKKIGGSPFFL 1101
QS+KDE RWKLLV+NVL +K+IGGSPFFL
Sbjct: 329 TQSRKDEKRWKLLVRNVLSTKRIGGSPFFL 358
>dbj|BAC43651.1| unknown protein [Arabidopsis thaliana]
Length = 368
Score = 436 bits (1120), Expect = e-121
Identities = 205/330 (62%), Positives = 259/330 (78%), Gaps = 1/330 (0%)
Frame = +1
Query: 115 HSSVSTATRDMWDRLFNDGYKADVVIYTDNGSIIYAHANILGTASTVIKGMLKQAKRHGK 294
+S VS ATRD WDR+F++ + ADV+I+TD+ +IYAH+N++G AS VI+GM+KQ KR
Sbjct: 34 NSFVSKATRDSWDRMFDEAHGADVLIHTDDNGLIYAHSNVIGMASDVIRGMMKQHKRKSH 93
Query: 295 WHTISIRGVPHDAVRVFIRFLYSSCYEKEEMNEFIMHLLLLSHAYVVPQLKRVCEWHLEH 474
+ISI GVPH A+RVFIRFLYSSCYEK++M +F +HLL+LSH YVVP LKRVCE E
Sbjct: 94 RKSISILGVPHHALRVFIRFLYSSCYEKQDMEDFAIHLLVLSHVYVVPHLKRVCESEFES 153
Query: 475 GLLTTENVVDVFQLALLCDFPRLSLISHRMIMKHFNELSATEAWTAMKKSHPFLEKEVRD 654
LL ENV+DVFQLALLCD PRL L+ HRMI+ +F E+S +E W MK+SHP L+KE+
Sbjct: 154 SLLNKENVIDVFQLALLCDAPRLGLLCHRMILNNFEEVSTSEGWQTMKESHPRLQKELLR 213
Query: 655 SVIIEANTRKERMRKRNDQRIYSQLYEAMEALVHICRDGCKTIGPHDKDFKPNHATCNYE 834
SV E N+ K+R RK+ + + Y+QLYEAMEA VHICRDGC+ IGP + H +C ++
Sbjct: 214 SVAYELNSLKQRNRKQKEIQTYTQLYEAMEAFVHICRDGCREIGPTKTE--TPHMSCGFQ 271
Query: 835 ACKGLESLIRHFAGCKLR-VPGGCVHCKRMWQLLELHSRVCAGSDQCRVPLCRNLKEKME 1011
AC GLE L++H AGCKLR +PGGC CKRMWQLLELHSR+C S+QC+VPLC +LKE+M+
Sbjct: 272 ACNGLEQLLKHLAGCKLRSIPGGCSRCKRMWQLLELHSRICVDSEQCKVPLCSSLKERMK 331
Query: 1012 KQSKKDESRWKLLVKNVLGSKKIGGSPFFL 1101
QS+KDE RWKLLV+NVL +K+IGGSPFFL
Sbjct: 332 TQSRKDEKRWKLLVRNVLSTKRIGGSPFFL 361
>gb|AAM61515.1| unknown [Arabidopsis thaliana]
Length = 367
Score = 434 bits (1116), Expect = e-120
Identities = 207/330 (62%), Positives = 260/330 (78%), Gaps = 1/330 (0%)
Frame = +1
Query: 115 HSSVSTATRDMWDRLFNDGYKADVVIYTDNGSIIYAHANILGTASTVIKGMLKQAKRHGK 294
+S VS ATRD WDR+F++ + ADV+I+TD+ +IYAH+N++G AS VI+GM+KQ KR
Sbjct: 34 NSFVSKATRDSWDRMFDEAHGADVLIHTDDNGLIYAHSNVIGMASDVIRGMMKQHKRKSH 93
Query: 295 WHTISIRGVPHDAVRVFIRFLYSSCYEKEEMNEFIMHLLLLSHAYVVPQLKRVCEWHLEH 474
+ISI GVPH AVRVFIRFLYSSCYEK++M +F +HLL+LSH YV P LKRVCE E
Sbjct: 94 RKSISILGVPHHAVRVFIRFLYSSCYEKQDMEDFAIHLLVLSHVYV-PHLKRVCESEFES 152
Query: 475 GLLTTENVVDVFQLALLCDFPRLSLISHRMIMKHFNELSATEAWTAMKKSHPFLEKEVRD 654
LL ENV+DVFQLALLCD PRL L+ HRMI+K+F E+S +E W AMK+SHP L+KE+
Sbjct: 153 SLLNKENVIDVFQLALLCDAPRLGLLCHRMILKNFEEVSTSEGWQAMKESHPRLQKELLR 212
Query: 655 SVIIEANTRKERMRKRNDQRIYSQLYEAMEALVHICRDGCKTIGPHDKDFKPNHATCNYE 834
SV E N+ K+R RK+ + + Y+QLYEAMEA VHICRDGC+ IGP + H +C ++
Sbjct: 213 SVAYELNSLKQRNRKQKEIQTYTQLYEAMEAFVHICRDGCREIGPTKTE--TPHMSCGFQ 270
Query: 835 ACKGLESLIRHFAGCKLR-VPGGCVHCKRMWQLLELHSRVCAGSDQCRVPLCRNLKEKME 1011
AC GLE L++H AGCKLR +PGGC CKRMWQLLELHSR+C S+QC+VPLC +LKE+M+
Sbjct: 271 ACNGLEQLLKHLAGCKLRSIPGGCSRCKRMWQLLELHSRICVDSEQCKVPLCSSLKERMK 330
Query: 1012 KQSKKDESRWKLLVKNVLGSKKIGGSPFFL 1101
QS+KDE RWKLLV+NVL +K+IGGSPFFL
Sbjct: 331 TQSRKDEKRWKLLVRNVLSTKRIGGSPFFL 360
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 124
effective length of database: 263,146,837
effective search space used: 65260415576
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)