BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At5g57730.f
         (129 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200581.1|  unknown protein; protein id: At5g57730.1 [...    87   5e-17

>ref|NP_200581.1| unknown protein; protein id: At5g57730.1 [Arabidopsis
           thaliana]|gi|9759270|dbj|BAB09591.1|
           gene_id:MRI1.9~unknown protein [Arabidopsis thaliana]
          Length = 42

 Score = 87.4 bits (215), Expect = 5e-17
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +1

Query: 1   MLQVSSCVLVSKKARGKEAKNLTHFKSIKTVFWVNHAYALDL 126
           MLQVSSCVLVSKKARGKEAKNLTHFKSIKTVFWVNHAYALDL
Sbjct: 1   MLQVSSCVLVSKKARGKEAKNLTHFKSIKTVFWVNHAYALDL 42



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 18
effective length of database: 405,085,713
effective search space used: 9722057112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)