BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PTA.sd.11468.C1
         (1867 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193130.1|  adenosylhomocysteinase; protein id: At4g13...   956   0.0  
gb|AAM62888.1|  adenosylhomocysteinase [Arabidopsis thaliana]     954   0.0  
ref|NP_189023.1|  S-adenosyl-L-homocysteinas, putative; prot...   918   0.0  
emb|CAB09795.1|  S-adenosyl-L-homocysteine hydrolase [Arabid...   917   0.0  
gb|AAL16259.1|AF428329_1  AT3g23810/MYM9_15 [Arabidopsis tha...   916   0.0  
>ref|NP_193130.1| adenosylhomocysteinase; protein id: At4g13940.1, supported by cDNA:
            16846., supported by cDNA: gi_13358226, supported by
            cDNA: gi_14596156, supported by cDNA: gi_15146275,
            supported by cDNA: gi_19699157, supported by cDNA:
            gi_20148278, supported by cDNA: gi_3088578 [Arabidopsis
            thaliana]|gi|6174970|sp|O23255|SAHH_ARATH
            Adenosylhomocysteinase (S-adenosyl-L-homocysteine
            hydrolase) (AdoHcyase)|gi|7435510|pir||C71400
            adenosylhomocysteinase (EC 3.3.1.1) [similarity] -
            Arabidopsis thaliana|gi|2244750|emb|CAB10173.1|
            adenosylhomocysteinase [Arabidopsis
            thaliana]|gi|3088579|gb|AAC14714.1|
            S-adenosyl-L-homocysteine hydrolase [Arabidopsis
            thaliana]|gi|7268098|emb|CAB78436.1|
            adenosylhomocysteinase [Arabidopsis
            thaliana]|gi|11762222|gb|AAG40389.1|AF325037_1 AT4g13940
            [Arabidopsis thaliana]|gi|14596157|gb|AAK68806.1|
            adenosylhomocysteinase [Arabidopsis
            thaliana]|gi|15146276|gb|AAK83621.1| AT4g13940/dl3010w
            [Arabidopsis thaliana]|gi|19699158|gb|AAL90945.1|
            AT4g13940/dl3010w [Arabidopsis
            thaliana]|gi|20148279|gb|AAM10030.1|
            adenosylhomocysteinase [Arabidopsis
            thaliana]|gi|27311597|gb|AAO00764.1|
            adenosylhomocysteinase [Arabidopsis thaliana]
          Length = 485

 Score =  956 bits (2471), Expect = 0.0
 Identities = 471/485 (97%), Positives = 471/485 (97%)
 Frame = +1

Query: 58   MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 237
            MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS
Sbjct: 1    MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 60

Query: 238  LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 417
            LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWC
Sbjct: 61   LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120

Query: 418  TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 597
            TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI
Sbjct: 121  TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180

Query: 598  IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 777
            IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN
Sbjct: 181  IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 240

Query: 778  LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 957
            LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ
Sbjct: 241  LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300

Query: 958  ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 1137
            ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301  ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360

Query: 1138 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 1317
            ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361  ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420

Query: 1318 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 1497
            LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP
Sbjct: 421  LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 480

Query: 1498 PHYRY 1512
            PHYRY
Sbjct: 481  PHYRY 485
>gb|AAM62888.1| adenosylhomocysteinase [Arabidopsis thaliana]
          Length = 485

 Score =  954 bits (2467), Expect = 0.0
 Identities = 470/485 (96%), Positives = 470/485 (96%)
 Frame = +1

Query: 58   MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 237
            MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS
Sbjct: 1    MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 60

Query: 238  LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 417
            LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWC
Sbjct: 61   LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120

Query: 418  TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 597
            TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI
Sbjct: 121  TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180

Query: 598  IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 777
            IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN
Sbjct: 181  IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 240

Query: 778  LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 957
            LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ
Sbjct: 241  LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300

Query: 958  ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 1137
            ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301  ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360

Query: 1138 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 1317
            ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361  ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420

Query: 1318 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 1497
            LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQ DYVSIPIEGPYKP
Sbjct: 421  LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQXDYVSIPIEGPYKP 480

Query: 1498 PHYRY 1512
            PHYRY
Sbjct: 481  PHYRY 485
>ref|NP_189023.1| S-adenosyl-L-homocysteinas, putative; protein id: At3g23810.1,
            supported by cDNA: gi_15292698, supported by cDNA:
            gi_16226775, supported by cDNA: gi_16649036, supported by
            cDNA: gi_20260073, supported by cDNA: gi_20453074
            [Arabidopsis thaliana]|gi|9293955|dbj|BAB01858.1|
            S-adenosyl L-homocystein hydrolase [Arabidopsis
            thaliana]|gi|16649037|gb|AAL24370.1| S-adenosyl
            L-homocystein hydrolase [Arabidopsis
            thaliana]|gi|20260074|gb|AAM13384.1| S-adenosyl
            L-homocystein hydrolase [Arabidopsis
            thaliana]|gi|23297630|gb|AAN12996.1| putative
            S-adenosyl-L-homocysteinase [Arabidopsis thaliana]
          Length = 485

 Score =  918 bits (2372), Expect = 0.0
 Identities = 449/485 (92%), Positives = 459/485 (94%)
 Frame = +1

Query: 58   MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 237
            MALLVEKTSSGREYKVKDMSQADFGRLE+ELAEVEMPGL++C TEFGPSQP KGARITGS
Sbjct: 1    MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLVSCVTEFGPSQPLKGARITGS 60

Query: 238  LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 417
            LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWC
Sbjct: 61   LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120

Query: 418  TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 597
            TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIF K G  PDPTSTDNPEFQIVLSI
Sbjct: 121  TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFAKNGTFPDPTSTDNPEFQIVLSI 180

Query: 598  IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 777
            IK+GLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQ+ G LLFPAINVNDSVTKSKFDN
Sbjct: 181  IKDGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDN 240

Query: 778  LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 957
            LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ
Sbjct: 241  LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300

Query: 958  ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 1137
            ALMEGLQVLTLEDVVSEADIF TTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301  ALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360

Query: 1138 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 1317
            ETYPGVKRITIKPQTDRWVFP+T +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361  ETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420

Query: 1318 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 1497
            LELWNEK+SGKYEKKVYVLPKHLDEKVA LHLGKLGARLTKL+KDQSDYVSIP+EGPYKP
Sbjct: 421  LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKP 480

Query: 1498 PHYRY 1512
             HYRY
Sbjct: 481  VHYRY 485
>emb|CAB09795.1| S-adenosyl-L-homocysteine hydrolase [Arabidopsis thaliana]
          Length = 467

 Score =  917 bits (2371), Expect = 0.0
 Identities = 450/467 (96%), Positives = 452/467 (96%)
 Frame = +1

Query: 112  MSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALG 291
            MSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALG
Sbjct: 1    MSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALG 60

Query: 292  AEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTERALDWGPGGGPDLIVD 471
            A+VRWCSCNIFSTQDH              WKGETLQEYWWCTERALDWGPGGGPDLIVD
Sbjct: 61   AQVRWCSCNIFSTQDHARAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVD 120

Query: 472  DGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSIIKEGLQVDPKKYHKMKER 651
            DGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSIIKEGLQVDPKKYHKMKER
Sbjct: 121  DGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSIIKEGLQVDPKKYHKMKER 180

Query: 652  LVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDV 831
            LVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDV
Sbjct: 181  LVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDV 240

Query: 832  MIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEA 1011
            MIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEA
Sbjct: 241  MIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEA 300

Query: 1012 DIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRW 1191
            DIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRW
Sbjct: 301  DIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRW 360

Query: 1192 VFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYV 1371
            VFPETKAGIIVLA+GRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYV
Sbjct: 361  VFPETKAGIIVLAQGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYV 420

Query: 1372 LPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 1512
            LPKHLDEKVALLHLGKLGARL KLSKDQSDYVSIPIEGPYKPPHYRY
Sbjct: 421  LPKHLDEKVALLHLGKLGARLRKLSKDQSDYVSIPIEGPYKPPHYRY 467
>gb|AAL16259.1|AF428329_1 AT3g23810/MYM9_15 [Arabidopsis thaliana]
          Length = 485

 Score =  916 bits (2367), Expect = 0.0
 Identities = 448/485 (92%), Positives = 458/485 (94%)
 Frame = +1

Query: 58   MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 237
            MALLVEKTSSGREYKVKDMSQADFGRLE+ELAEVEMPGL++C  EFGPSQP KGARITGS
Sbjct: 1    MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLVSCVAEFGPSQPLKGARITGS 60

Query: 238  LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 417
            LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWC
Sbjct: 61   LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120

Query: 418  TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 597
            TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIF K G  PDPTSTDNPEFQIVLSI
Sbjct: 121  TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFAKNGTFPDPTSTDNPEFQIVLSI 180

Query: 598  IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 777
            IK+GLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQ+ G LLFPAINVNDSVTKSKFDN
Sbjct: 181  IKDGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDN 240

Query: 778  LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 957
            LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ
Sbjct: 241  LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300

Query: 958  ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 1137
            ALMEGLQVLTLEDVVSEADIF TTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301  ALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360

Query: 1138 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 1317
            ETYPGVKRITIKPQTDRWVFP+T +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361  ETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420

Query: 1318 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 1497
            LELWNEK+SGKYEKKVYVLPKHLDEKVA LHLGKLGARLTKL+KDQSDYVSIP+EGPYKP
Sbjct: 421  LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKP 480

Query: 1498 PHYRY 1512
             HYRY
Sbjct: 481  VHYRY 485
  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 129
effective length of database: 256,451,607
effective search space used: 126174190644
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)







BLAST Search Results