BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.11468.C1
(1867 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193130.1| adenosylhomocysteinase; protein id: At4g13... 956 0.0
gb|AAM62888.1| adenosylhomocysteinase [Arabidopsis thaliana] 954 0.0
ref|NP_189023.1| S-adenosyl-L-homocysteinas, putative; prot... 918 0.0
emb|CAB09795.1| S-adenosyl-L-homocysteine hydrolase [Arabid... 917 0.0
gb|AAL16259.1|AF428329_1 AT3g23810/MYM9_15 [Arabidopsis tha... 916 0.0
>ref|NP_193130.1| adenosylhomocysteinase; protein id: At4g13940.1, supported by cDNA:
16846., supported by cDNA: gi_13358226, supported by
cDNA: gi_14596156, supported by cDNA: gi_15146275,
supported by cDNA: gi_19699157, supported by cDNA:
gi_20148278, supported by cDNA: gi_3088578 [Arabidopsis
thaliana]|gi|6174970|sp|O23255|SAHH_ARATH
Adenosylhomocysteinase (S-adenosyl-L-homocysteine
hydrolase) (AdoHcyase)|gi|7435510|pir||C71400
adenosylhomocysteinase (EC 3.3.1.1) [similarity] -
Arabidopsis thaliana|gi|2244750|emb|CAB10173.1|
adenosylhomocysteinase [Arabidopsis
thaliana]|gi|3088579|gb|AAC14714.1|
S-adenosyl-L-homocysteine hydrolase [Arabidopsis
thaliana]|gi|7268098|emb|CAB78436.1|
adenosylhomocysteinase [Arabidopsis
thaliana]|gi|11762222|gb|AAG40389.1|AF325037_1 AT4g13940
[Arabidopsis thaliana]|gi|14596157|gb|AAK68806.1|
adenosylhomocysteinase [Arabidopsis
thaliana]|gi|15146276|gb|AAK83621.1| AT4g13940/dl3010w
[Arabidopsis thaliana]|gi|19699158|gb|AAL90945.1|
AT4g13940/dl3010w [Arabidopsis
thaliana]|gi|20148279|gb|AAM10030.1|
adenosylhomocysteinase [Arabidopsis
thaliana]|gi|27311597|gb|AAO00764.1|
adenosylhomocysteinase [Arabidopsis thaliana]
Length = 485
Score = 956 bits (2471), Expect = 0.0
Identities = 471/485 (97%), Positives = 471/485 (97%)
Frame = +1
Query: 58 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 237
MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 238 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 417
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH WKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 418 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 597
TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180
Query: 598 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 777
IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 240
Query: 778 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 957
LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300
Query: 958 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 1137
ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 1138 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 1317
ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 1318 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 1497
LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP
Sbjct: 421 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 480
Query: 1498 PHYRY 1512
PHYRY
Sbjct: 481 PHYRY 485
>gb|AAM62888.1| adenosylhomocysteinase [Arabidopsis thaliana]
Length = 485
Score = 954 bits (2467), Expect = 0.0
Identities = 470/485 (96%), Positives = 470/485 (96%)
Frame = +1
Query: 58 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 237
MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 238 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 417
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH WKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 418 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 597
TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180
Query: 598 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 777
IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 240
Query: 778 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 957
LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300
Query: 958 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 1137
ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 1138 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 1317
ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 1318 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 1497
LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQ DYVSIPIEGPYKP
Sbjct: 421 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQXDYVSIPIEGPYKP 480
Query: 1498 PHYRY 1512
PHYRY
Sbjct: 481 PHYRY 485
>ref|NP_189023.1| S-adenosyl-L-homocysteinas, putative; protein id: At3g23810.1,
supported by cDNA: gi_15292698, supported by cDNA:
gi_16226775, supported by cDNA: gi_16649036, supported by
cDNA: gi_20260073, supported by cDNA: gi_20453074
[Arabidopsis thaliana]|gi|9293955|dbj|BAB01858.1|
S-adenosyl L-homocystein hydrolase [Arabidopsis
thaliana]|gi|16649037|gb|AAL24370.1| S-adenosyl
L-homocystein hydrolase [Arabidopsis
thaliana]|gi|20260074|gb|AAM13384.1| S-adenosyl
L-homocystein hydrolase [Arabidopsis
thaliana]|gi|23297630|gb|AAN12996.1| putative
S-adenosyl-L-homocysteinase [Arabidopsis thaliana]
Length = 485
Score = 918 bits (2372), Expect = 0.0
Identities = 449/485 (92%), Positives = 459/485 (94%)
Frame = +1
Query: 58 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 237
MALLVEKTSSGREYKVKDMSQADFGRLE+ELAEVEMPGL++C TEFGPSQP KGARITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLVSCVTEFGPSQPLKGARITGS 60
Query: 238 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 417
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH WKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 418 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 597
TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIF K G PDPTSTDNPEFQIVLSI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFAKNGTFPDPTSTDNPEFQIVLSI 180
Query: 598 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 777
IK+GLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQ+ G LLFPAINVNDSVTKSKFDN
Sbjct: 181 IKDGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDN 240
Query: 778 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 957
LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300
Query: 958 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 1137
ALMEGLQVLTLEDVVSEADIF TTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 1138 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 1317
ETYPGVKRITIKPQTDRWVFP+T +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 1318 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 1497
LELWNEK+SGKYEKKVYVLPKHLDEKVA LHLGKLGARLTKL+KDQSDYVSIP+EGPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKP 480
Query: 1498 PHYRY 1512
HYRY
Sbjct: 481 VHYRY 485
>emb|CAB09795.1| S-adenosyl-L-homocysteine hydrolase [Arabidopsis thaliana]
Length = 467
Score = 917 bits (2371), Expect = 0.0
Identities = 450/467 (96%), Positives = 452/467 (96%)
Frame = +1
Query: 112 MSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALG 291
MSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALG
Sbjct: 1 MSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALG 60
Query: 292 AEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTERALDWGPGGGPDLIVD 471
A+VRWCSCNIFSTQDH WKGETLQEYWWCTERALDWGPGGGPDLIVD
Sbjct: 61 AQVRWCSCNIFSTQDHARAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVD 120
Query: 472 DGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSIIKEGLQVDPKKYHKMKER 651
DGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSIIKEGLQVDPKKYHKMKER
Sbjct: 121 DGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSIIKEGLQVDPKKYHKMKER 180
Query: 652 LVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDV 831
LVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDV
Sbjct: 181 LVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDV 240
Query: 832 MIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEA 1011
MIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEA
Sbjct: 241 MIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEA 300
Query: 1012 DIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRW 1191
DIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRW
Sbjct: 301 DIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRW 360
Query: 1192 VFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYV 1371
VFPETKAGIIVLA+GRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYV
Sbjct: 361 VFPETKAGIIVLAQGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYV 420
Query: 1372 LPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 1512
LPKHLDEKVALLHLGKLGARL KLSKDQSDYVSIPIEGPYKPPHYRY
Sbjct: 421 LPKHLDEKVALLHLGKLGARLRKLSKDQSDYVSIPIEGPYKPPHYRY 467
>gb|AAL16259.1|AF428329_1 AT3g23810/MYM9_15 [Arabidopsis thaliana]
Length = 485
Score = 916 bits (2367), Expect = 0.0
Identities = 448/485 (92%), Positives = 458/485 (94%)
Frame = +1
Query: 58 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 237
MALLVEKTSSGREYKVKDMSQADFGRLE+ELAEVEMPGL++C EFGPSQP KGARITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLVSCVAEFGPSQPLKGARITGS 60
Query: 238 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 417
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH WKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 418 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 597
TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIF K G PDPTSTDNPEFQIVLSI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFAKNGTFPDPTSTDNPEFQIVLSI 180
Query: 598 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 777
IK+GLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQ+ G LLFPAINVNDSVTKSKFDN
Sbjct: 181 IKDGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDN 240
Query: 778 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 957
LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300
Query: 958 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 1137
ALMEGLQVLTLEDVVSEADIF TTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 1138 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 1317
ETYPGVKRITIKPQTDRWVFP+T +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 1318 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 1497
LELWNEK+SGKYEKKVYVLPKHLDEKVA LHLGKLGARLTKL+KDQSDYVSIP+EGPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKP 480
Query: 1498 PHYRY 1512
HYRY
Sbjct: 481 VHYRY 485
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 129
effective length of database: 256,451,607
effective search space used: 126174190644
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)