BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BU635944.x
(806 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F86147 hypothetical protein T1N6.5 [imported] - Arabid... 458 e-130
ref|NP_171674.1| hypothetical protein; protein id: At1g0168... 387 e-108
pir||E86147 T1N6.4 protein - Arabidopsis thaliana|gi|867183... 161 9e-39
ref|NP_171673.1| hypothetical protein; protein id: At1g0167... 147 2e-34
dbj|BAC42729.1| unknown protein [Arabidopsis thaliana] 128 8e-29
>pir||F86147 hypothetical protein T1N6.5 [imported] - Arabidopsis
thaliana|gi|8671835|gb|AAF78398.1|AC009273_4 Contains
similarity to a putative protein T2J13.100 gi|6522560
from Arabidopsis thaliana BAC T2J13 gb|AL132967
Length = 308
Score = 458 bits (1179), Expect(2) = e-130
Identities = 232/251 (92%), Positives = 233/251 (92%)
Frame = +1
Query: 52 RESKKTLLWALKNLQVKKIFLLHVHLPFSLTTSSSRLEQSEIDAIQDSELNTSVNSLYKY 231
RESKKTLLWALKNLQVKKIFLLHVHLPFSLTTSSSRLEQSEIDAIQDSELNTSVNSLYKY
Sbjct: 14 RESKKTLLWALKNLQVKKIFLLHVHLPFSLTTSSSRLEQSEIDAIQDSELNTSVNSLYKY 73
Query: 232 RDICINKGVNEKDVDTSMISGHDVGEGDLLETSSYQNIITNLVMGAAADPHYSRGMSITS 411
RDICINKGVNEKDVDTSMISGHDVGEG + YQNIITNLVMGAAADPHYSRGMSITS
Sbjct: 74 RDICINKGVNEKDVDTSMISGHDVGEG--IVELIYQNIITNLVMGAAADPHYSRGMSITS 131
Query: 412 RKAEYVSQHAPHSCKIWFICKGKLIKQRERSFYLGNPSDSFSEFSTSAEKPISKGRRRDX 591
RKAEYVSQHAPHSCKIWFICKGKLIKQRERSFYLGNPSDSFSEFSTSAEKPISKGRRRD
Sbjct: 132 RKAEYVSQHAPHSCKIWFICKGKLIKQRERSFYLGNPSDSFSEFSTSAEKPISKGRRRDE 191
Query: 592 XXXXXXXXXXXGWILEPEESPKKGRKETIEKSKSNESDEDPRLEDFKCPISMEIMRDPHV 771
GWILEPEESPKKGRKETIEKSKSNESDEDPRLEDFKCPISMEIMRDPHV
Sbjct: 192 EEEPESPKEHPGWILEPEESPKKGRKETIEKSKSNESDEDPRLEDFKCPISMEIMRDPHV 251
Query: 772 AADGFTYEAEE 804
AADGFTYEAEE
Sbjct: 252 AADGFTYEAEE 262
Score = 28.5 bits (62), Expect(2) = e-130
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 14 MEDAIYVAVKSDVEKVKK 67
MEDAIYVAV DV + KK
Sbjct: 1 MEDAIYVAVNQDVRESKK 18
>ref|NP_171674.1| hypothetical protein; protein id: At1g01680.1 [Arabidopsis
thaliana]
Length = 282
Score = 387 bits (993), Expect(2) = e-108
Identities = 198/223 (88%), Positives = 200/223 (88%), Gaps = 5/223 (2%)
Frame = +1
Query: 151 SSRLEQSEIDAIQDSELNTSVNSLYKYRDICINKGVNEKDVDTSMISGHDVGEGDLLETS 330
+SRLEQSEIDAIQDSELNTSVNSLYKYRDICINKGVNEKDVDTSMISGHDVGEG +
Sbjct: 16 TSRLEQSEIDAIQDSELNTSVNSLYKYRDICINKGVNEKDVDTSMISGHDVGEG--IVEL 73
Query: 331 SYQNIITNLVMGAAADPHYSRGMSITSRKAEYVSQHAPHSCKIWFICKGKLIKQRERSFY 510
YQNIITNLVMGAAADPHYSRGMSITSRKAEYVSQHAPHSCKIWFICKGKLIKQRERSFY
Sbjct: 74 IYQNIITNLVMGAAADPHYSRGMSITSRKAEYVSQHAPHSCKIWFICKGKLIKQRERSFY 133
Query: 511 LGNPSDSFSEFSTSAEKPISKGRRRDXXXXXXXXXXXXGWILEPEESPKKGRKETIEKSK 690
LGNPSDSFSEFSTSAEKPISKGRRRD GWILEPEESPKKGRKETIEKSK
Sbjct: 134 LGNPSDSFSEFSTSAEKPISKGRRRDEEEEPESPKEHPGWILEPEESPKKGRKETIEKSK 193
Query: 691 SNESDEDPRLEDFKCPISM-----EIMRDPHVAADGFTYEAEE 804
SNESDEDPRLEDFKCPISM EIMRDPHVAADGFTYEAEE
Sbjct: 194 SNESDEDPRLEDFKCPISMVRIFEEIMRDPHVAADGFTYEAEE 236
Score = 27.7 bits (60), Expect(2) = e-108
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 14 MEDAIYVAVKSDVEKVKKL 70
MEDAIYVAV DV + +L
Sbjct: 1 MEDAIYVAVNQDVRETSRL 19
>pir||E86147 T1N6.4 protein - Arabidopsis
thaliana|gi|8671834|gb|AAF78397.1|AC009273_3 Contains
similarity to a putative protein T2J13.100 gi|6522560
from Arabidopsis thaliana BAC T2J13 gb|AL132967
Length = 952
Score = 161 bits (408), Expect = 9e-39
Identities = 86/152 (56%), Positives = 104/152 (67%), Gaps = 1/152 (0%)
Frame = +1
Query: 55 ESKKTLLWALKNLQVKKIFLLHVHLPFSLTTSSSRLEQSEIDAIQDSELNTSVNSLYKYR 234
+S+ TLLWALK L+ KK+ LLHVH S+T SSS LEQSEIDAIQ+ E + ++L KY
Sbjct: 21 QSRLTLLWALKTLRAKKLHLLHVHQLISMTPSSSGLEQSEIDAIQELEQTSRNDTLLKYH 80
Query: 235 DICINKGVNEKDVDTSMISGHDVGEGDLLETSSYQNIITNLVMGAAADPHYSRGM-SITS 411
DICI++GV E+DVD S S + VGE + YQN I L+MGA AD HYS GM IT
Sbjct: 81 DICIDEGVIEQDVDMSCFSANSVGE--WIVELIYQNNIKKLIMGATADSHYSEGMVHITP 138
Query: 412 RKAEYVSQHAPHSCKIWFICKGKLIKQRERSF 507
KA+YV QHAPH C IW +C G LI+ RE F
Sbjct: 139 TKADYVIQHAPHCCNIWLVCNGNLIQTREGRF 170
Score = 115 bits (288), Expect(2) = 6e-25
Identities = 68/150 (45%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Frame = +1
Query: 52 RESKKTLLWALKNLQVKKIFLLHVHLPFSLTTSSSRLEQSEIDAIQDSELNTSVNSLYKY 231
RES+ TLLWAL+NL KK+ +LHV+ P + + ++ +LE E++AI +L+ Y
Sbjct: 398 RESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLE--ELEAIM-------YETLHDY 448
Query: 232 RDICINKGVNEKDVDTSMISGHDVGEGDLLETSSYQNIITNLVMGAAADPHYSRGM-SIT 408
D C +GVNE D+ S I +DV +G +LE +++ I LVMGAA+D HYS M +
Sbjct: 449 FDFCQQEGVNEDDIYISCIEMNDVKQG-ILEL-IHESKIKKLVMGAASDHHYSEKMFDLK 506
Query: 409 SRKAEYVSQHAPHSCKIWFICKGKLIKQRE 498
SRKA+YV QHAP SC++ F+C G LI +E
Sbjct: 507 SRKAKYVYQHAPSSCEVMFMCDGHLIYTKE 536
Score = 47.8 bits (112), Expect = 2e-04
Identities = 25/41 (60%), Positives = 27/41 (64%), Gaps = 4/41 (9%)
Frame = +1
Query: 691 SNESDEDPRLED----FKCPISMEIMRDPHVAADGFTYEAE 801
S SDED F CPIS E+MR+P VAADGFTYEAE
Sbjct: 869 SGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAE 909
Score = 21.2 bits (43), Expect(2) = 6e-25
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 20 DAIYVAVKSDVEK 58
D ++VAVKSDV +
Sbjct: 387 DVVHVAVKSDVRE 399
>ref|NP_171673.1| hypothetical protein; protein id: At1g01670.1 [Arabidopsis
thaliana]
Length = 407
Score = 147 bits (370), Expect = 2e-34
Identities = 79/152 (51%), Positives = 98/152 (63%), Gaps = 1/152 (0%)
Frame = +1
Query: 55 ESKKTLLWALKNLQVKKIFLLHVHLPFSLTTSSSRLEQSEIDAIQDSELNTSVNSLYKYR 234
+S+ TLLWALK L+ KK+ LLHVH S+T SSS LEQSEIDAIQ+ E + ++L KY
Sbjct: 21 QSRLTLLWALKTLRAKKLHLLHVHQLISMTPSSSGLEQSEIDAIQELEQTSRNDTLLKYH 80
Query: 235 DICINKGVNEKDVDTSMISGHDVGEGDLLETSSYQNIITNLVMGAAADPHYSRGM-SITS 411
DICI++GV+ S+ G+ + YQN I L+MGA AD HYS GM IT
Sbjct: 81 DICIDEGVSALPTTNSV--------GEWIVELIYQNNIKKLIMGATADSHYSEGMVHITP 132
Query: 412 RKAEYVSQHAPHSCKIWFICKGKLIKQRERSF 507
KA+YV QHAPH C IW +C G LI+ RE F
Sbjct: 133 TKADYVIQHAPHCCNIWLVCNGNLIQTREGRF 164
Score = 46.6 bits (109), Expect = 4e-04
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +1
Query: 727 FKCPISMEIMRDPHVAADGFTYEAEE 804
F CPIS +IM++PHVAADG+TYEA+E
Sbjct: 340 FICPISKDIMQNPHVAADGYTYEADE 365
>dbj|BAC42729.1| unknown protein [Arabidopsis thaliana]
Length = 365
Score = 128 bits (322), Expect = 8e-29
Identities = 69/124 (55%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Frame = +1
Query: 139 LTTSSSRLEQSEIDAIQDSELNTSVNSLYKYRDICINKGVNEKDVDTSMISGHDVGEGDL 318
+T SSS LEQSEIDAIQ+ E + ++L KY DICI++GV E+DVD S S + VGE
Sbjct: 1 MTPSSSGLEQSEIDAIQELEQTSRNDTLLKYHDICIDEGVIEQDVDMSCFSANSVGE--W 58
Query: 319 LETSSYQNIITNLVMGAAADPHYSRGM-SITSRKAEYVSQHAPHSCKIWFICKGKLIKQR 495
+ YQN I L+MGA AD HYS GM IT KA+YV QHAPH C IW +C G LI+ R
Sbjct: 59 IVELIYQNNIKKLIMGATADSHYSEGMVHITPTKADYVIQHAPHCCNIWLVCNGNLIQTR 118
Query: 496 ERSF 507
E F
Sbjct: 119 EGRF 122
Score = 46.6 bits (109), Expect = 4e-04
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +1
Query: 727 FKCPISMEIMRDPHVAADGFTYEAEE 804
F CPIS +IM++PHVAADG+TYEA+E
Sbjct: 298 FICPISKDIMQNPHVAADGYTYEADE 323
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.315 0.131 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 121
effective length of database: 267,163,975
effective search space used: 39273104325
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)