BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.30.C1
(1736 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171655.1| 1-aminocyclopropane-1-carboxylate synthase... 884 0.0
gb|AAA97516.1| 1-aminocyclopropane-1-carboxylate synthase 883 0.0
gb|AAK97678.1| At1g01480/F22L4_3 [Arabidopsis thaliana]|gi|... 780 0.0
gb|AAL37504.1|AF338652_1 ACC synthase [Brassica oleracea va... 654 0.0
dbj|BAB89349.1| 1-aminocyclopropane-1-carboxylate synthase ... 586 e-166
>ref|NP_171655.1| 1-aminocyclopropane-1-carboxylate synthase (ACC synthase); protein
id: At1g01480.1, supported by cDNA: gi_12248010,
supported by cDNA: gi_166579 [Arabidopsis
thaliana]|gi|543712|sp|Q06402|1A12_ARATH
1-aminocyclopropane-2-carboxylate synthase 2 (ACC
synthase 2) (S-adenosyl-L-methionine
methylthioadenosine-lyase 2)|gi|476924|pir||A47199
1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
- Arabidopsis thaliana|gi|16148|emb|CAA78260.1|
1-aminocyclopropane 1-carboxylate synthase [Arabidopsis
thaliana]|gi|166580|gb|AAB59298.1|
1-aminocyclopropane-1-carboxylate
synthase|gi|2505881|emb|CAA73310.1| ACC-synthase
[Arabidopsis
thaliana]|gi|8920586|gb|AAF81308.1|AC061957_4 Identical
to 1-aminocyclopropane-1-carboxylate synthase (ASC2) from
Arabidopsis thaliana gb|M95594 and contains an
aminotransferases class-I PF|00155 domain. EST
gb|BE038138 comes from this
gene|gi|12248011|gb|AAG50097.1|AF334719_1
1-aminocyclopropane-1-carboxylate synthase ACS2
[Arabidopsis thaliana]
Length = 496
Score = 884 bits (2285), Expect = 0.0
Identities = 440/440 (100%), Positives = 440/440 (100%)
Frame = +2
Query: 65 QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVT 244
QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVT
Sbjct: 57 QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVT 116
Query: 245 FDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS 424
FDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS
Sbjct: 117 FDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS 176
Query: 425 DNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLV 604
DNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLV
Sbjct: 177 DNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLV 236
Query: 605 VDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 784
VDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND
Sbjct: 237 VDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 296
Query: 785 SVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI 964
SVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI
Sbjct: 297 SVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI 356
Query: 965 ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRIC 1144
ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRIC
Sbjct: 357 ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRIC 416
Query: 1145 FANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRL 1324
FANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRL
Sbjct: 417 FANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRL 476
Query: 1325 YEDGLSSPGIMSPHSPLLRA 1384
YEDGLSSPGIMSPHSPLLRA
Sbjct: 477 YEDGLSSPGIMSPHSPLLRA 496
>gb|AAA97516.1| 1-aminocyclopropane-1-carboxylate synthase
Length = 496
Score = 883 bits (2281), Expect = 0.0
Identities = 439/440 (99%), Positives = 440/440 (99%)
Frame = +2
Query: 65 QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVT 244
QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVT
Sbjct: 57 QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVT 116
Query: 245 FDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS 424
FDPERVVMSGGATGANETI+FCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS
Sbjct: 117 FDPERVVMSGGATGANETIIFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS 176
Query: 425 DNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLV 604
DNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLV
Sbjct: 177 DNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLV 236
Query: 605 VDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 784
VDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND
Sbjct: 237 VDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 296
Query: 785 SVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI 964
SVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI
Sbjct: 297 SVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI 356
Query: 965 ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRIC 1144
ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRIC
Sbjct: 357 ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRIC 416
Query: 1145 FANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRL 1324
FANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRL
Sbjct: 417 FANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRL 476
Query: 1325 YEDGLSSPGIMSPHSPLLRA 1384
YEDGLSSPGIMSPHSPLLRA
Sbjct: 477 YEDGLSSPGIMSPHSPLLRA 496
>gb|AAK97678.1| At1g01480/F22L4_3 [Arabidopsis thaliana]|gi|23505913|gb|AAN28816.1|
At1g01480/F22L4_3 [Arabidopsis thaliana]
Length = 390
Score = 780 bits (2013), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Frame = +2
Query: 215 MGKARGGRVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGV 394
MGKARGGRVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGV
Sbjct: 1 MGKARGGRVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGV 60
Query: 395 EIIPVPCSSSDNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVR 574
EIIPVPCSSSDNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVR
Sbjct: 61 EIIPVPCSSSDNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVR 120
Query: 575 FVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF 754
FVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF
Sbjct: 121 FVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF 180
Query: 755 RVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKV 934
RVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKV
Sbjct: 181 RVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKV 240
Query: 935 FTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFR 1114
FTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFR
Sbjct: 241 FTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFR 300
Query: 1115 CTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQ 1294
CTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQ
Sbjct: 301 CTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQ 360
Query: 1295 TNLRLSFRRLYEDGLSSPGIMSPHSPLLRA 1384
TNLRLSFRRLYEDGLSSPGIMSPHSPLLRA
Sbjct: 361 TNLRLSFRRLYEDGLSSPGIMSPHSPLLRA 390
>gb|AAL37504.1|AF338652_1 ACC synthase [Brassica oleracea var. italica]
Length = 369
Score = 654 bits (1686), Expect = 0.0
Identities = 319/365 (87%), Positives = 340/365 (92%)
Frame = +2
Query: 65 QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVT 244
QLCLDLIK+W+KENP+AS+CT EG+HQFSDIANFQDYHGLK+FRQAIAHFMGKARGGRVT
Sbjct: 8 QLCLDLIKEWIKENPKASVCTPEGVHQFSDIANFQDYHGLKEFRQAIAHFMGKARGGRVT 67
Query: 245 FDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS 424
FDPER+VMSGGATGANETIMFCLADPGDVFL+PSPYYAAFDRDLRWRTGVEI+PV CSSS
Sbjct: 68 FDPERIVMSGGATGANETIMFCLADPGDVFLVPSPYYAAFDRDLRWRTGVEIVPVHCSSS 127
Query: 425 DNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLV 604
+NFKLTV+A EWAYKKA ESNK VKGL+ TNPSNPLGT+LDKDTL NLVRFVT+KNIHLV
Sbjct: 128 NNFKLTVEAVEWAYKKAVESNKNVKGLLFTNPSNPLGTILDKDTLKNLVRFVTKKNIHLV 187
Query: 605 VDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 784
VDEIYAATVFAG + VSVAEVV D SEVN DLIHIVYSLSKDMGLPGFRVGIVYS+ND
Sbjct: 188 VDEIYAATVFAGENLVSVAEVVKD---SEVNADLIHIVYSLSKDMGLPGFRVGIVYSYND 244
Query: 785 SVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI 964
SVVSCARKMSSFGLVSSQTQ MLASMLSDD FV NFLMESS+RLGIRH VFT G+KKA I
Sbjct: 245 SVVSCARKMSSFGLVSSQTQFMLASMLSDDSFVGNFLMESSKRLGIRHGVFTLGLKKAGI 304
Query: 965 ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRIC 1144
CL S AGLF WMDLRHLLR RNSFESEIELWHIIID+VKLNVSPGSSF+CTEPGWFR+C
Sbjct: 305 NCLISTAGLFVWMDLRHLLRVRNSFESEIELWHIIIDKVKLNVSPGSSFQCTEPGWFRVC 364
Query: 1145 FANMD 1159
FANMD
Sbjct: 365 FANMD 369
>dbj|BAB89349.1| 1-aminocyclopropane-1-carboxylate synthase [Diospyros kaki]
Length = 488
Score = 586 bits (1511), Expect = e-166
Identities = 289/442 (65%), Positives = 353/442 (79%), Gaps = 2/442 (0%)
Frame = +2
Query: 65 QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVT 244
QL DLI+DW+K+N ASICT EG+H F +IANFQDYHGL +FR A+A FMGK RGGR
Sbjct: 60 QLSFDLIEDWMKKNQRASICTTEGVHMFKEIANFQDYHGLPEFRNAVAKFMGKVRGGRAE 119
Query: 245 FDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS 424
FDP+R+VM GGATGANE +MFCLADPGD FL+PSPYY AFDRDLRWRTGV+++PV C SS
Sbjct: 120 FDPKRIVMGGGATGANELLMFCLADPGDAFLVPSPYYPAFDRDLRWRTGVKLLPVECKSS 179
Query: 425 DNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLV 604
D+F++T +A E AY+KA ESN +VKGLI+ NPSNPLGT++D++TL +LV FV KNIH V
Sbjct: 180 DSFRITREALEEAYEKASESNIRVKGLIIGNPSNPLGTIMDRNTLKSLVSFVNDKNIHFV 239
Query: 605 VDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 784
DEIYAATVF +F+SV+E++ ++D N+DLIH+VYSLSKDMG+PGFRVGIVYS+ND
Sbjct: 240 CDEIYAATVFKQPEFISVSEIIQEMD---CNLDLIHVVYSLSKDMGMPGFRVGIVYSYND 296
Query: 785 SVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI 964
VV+CARKMSSFGLVSSQTQ +LASMLSDD+FV+ F+ ESSRRL RH+ FT G+K+ +I
Sbjct: 297 EVVTCARKMSSFGLVSSQTQHLLASMLSDDEFVERFIGESSRRLENRHRTFTEGLKEVEI 356
Query: 965 ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRIC 1144
CL NAGLF WMDLR LL++ +FE+E ELW +II++VKLNVSPGSSF C+EPGWFR+C
Sbjct: 357 KCLEGNAGLFCWMDLRPLLKEA-TFEAETELWKVIINQVKLNVSPGSSFHCSEPGWFRVC 415
Query: 1145 FANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFR-- 1318
FANMDD+T+ VAL RI+ FV + K KA+ KK K Q NLRLSF
Sbjct: 416 FANMDDETVQVALQRIRTFVDEKKG--AGKAAPE---------KKKKQWQRNLRLSFSSG 464
Query: 1319 RLYEDGLSSPGIMSPHSPLLRA 1384
R+YEDG SP ++SPHSP+LRA
Sbjct: 465 RIYEDGCLSPHVLSPHSPMLRA 486
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 129
effective length of database: 256,451,607
effective search space used: 115146771543
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)