BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01480.f
(1491 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171655.1| 1-aminocyclopropane-1-carboxylate synthase... 1003 0.0
gb|AAA97516.1| 1-aminocyclopropane-1-carboxylate synthase 1001 0.0
gb|AAK97678.1| At1g01480/F22L4_3 [Arabidopsis thaliana]|gi|... 780 0.0
gb|AAL37504.1|AF338652_1 ACC synthase [Brassica oleracea va... 667 0.0
dbj|BAB89349.1| 1-aminocyclopropane-1-carboxylate synthase ... 665 0.0
>ref|NP_171655.1| 1-aminocyclopropane-1-carboxylate synthase (ACC synthase); protein
id: At1g01480.1, supported by cDNA: gi_12248010,
supported by cDNA: gi_166579 [Arabidopsis
thaliana]|gi|543712|sp|Q06402|1A12_ARATH
1-aminocyclopropane-2-carboxylate synthase 2 (ACC
synthase 2) (S-adenosyl-L-methionine
methylthioadenosine-lyase 2)|gi|476924|pir||A47199
1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
- Arabidopsis thaliana|gi|16148|emb|CAA78260.1|
1-aminocyclopropane 1-carboxylate synthase [Arabidopsis
thaliana]|gi|166580|gb|AAB59298.1|
1-aminocyclopropane-1-carboxylate
synthase|gi|2505881|emb|CAA73310.1| ACC-synthase
[Arabidopsis
thaliana]|gi|8920586|gb|AAF81308.1|AC061957_4 Identical
to 1-aminocyclopropane-1-carboxylate synthase (ASC2) from
Arabidopsis thaliana gb|M95594 and contains an
aminotransferases class-I PF|00155 domain. EST
gb|BE038138 comes from this
gene|gi|12248011|gb|AAG50097.1|AF334719_1
1-aminocyclopropane-1-carboxylate synthase ACS2
[Arabidopsis thaliana]
Length = 496
Score = 1003 bits (2593), Expect = 0.0
Identities = 496/496 (100%), Positives = 496/496 (100%)
Frame = +1
Query: 1 MGLPGKNKGAVLSKIATNNQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCL 180
MGLPGKNKGAVLSKIATNNQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCL
Sbjct: 1 MGLPGKNKGAVLSKIATNNQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCL 60
Query: 181 DLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVTFDPE 360
DLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVTFDPE
Sbjct: 61 DLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVTFDPE 120
Query: 361 RVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFK 540
RVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFK
Sbjct: 121 RVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFK 180
Query: 541 LTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEI 720
LTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEI
Sbjct: 181 LTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEI 240
Query: 721 YAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVS 900
YAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVS
Sbjct: 241 YAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVS 300
Query: 901 CARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLT 1080
CARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLT
Sbjct: 301 CARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLT 360
Query: 1081 SNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRICFANM 1260
SNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRICFANM
Sbjct: 361 SNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRICFANM 420
Query: 1261 DDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRLYEDG 1440
DDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRLYEDG
Sbjct: 421 DDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRLYEDG 480
Query: 1441 LSSPGIMSPHSPLLRA 1488
LSSPGIMSPHSPLLRA
Sbjct: 481 LSSPGIMSPHSPLLRA 496
>gb|AAA97516.1| 1-aminocyclopropane-1-carboxylate synthase
Length = 496
Score = 1001 bits (2589), Expect = 0.0
Identities = 495/496 (99%), Positives = 496/496 (99%)
Frame = +1
Query: 1 MGLPGKNKGAVLSKIATNNQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCL 180
MGLPGKNKGAVLSKIATNNQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCL
Sbjct: 1 MGLPGKNKGAVLSKIATNNQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCL 60
Query: 181 DLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVTFDPE 360
DLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVTFDPE
Sbjct: 61 DLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVTFDPE 120
Query: 361 RVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFK 540
RVVMSGGATGANETI+FCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFK
Sbjct: 121 RVVMSGGATGANETIIFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFK 180
Query: 541 LTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEI 720
LTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEI
Sbjct: 181 LTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEI 240
Query: 721 YAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVS 900
YAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVS
Sbjct: 241 YAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVS 300
Query: 901 CARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLT 1080
CARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLT
Sbjct: 301 CARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLT 360
Query: 1081 SNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRICFANM 1260
SNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRICFANM
Sbjct: 361 SNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRICFANM 420
Query: 1261 DDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRLYEDG 1440
DDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRLYEDG
Sbjct: 421 DDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFRRLYEDG 480
Query: 1441 LSSPGIMSPHSPLLRA 1488
LSSPGIMSPHSPLLRA
Sbjct: 481 LSSPGIMSPHSPLLRA 496
>gb|AAK97678.1| At1g01480/F22L4_3 [Arabidopsis thaliana]|gi|23505913|gb|AAN28816.1|
At1g01480/F22L4_3 [Arabidopsis thaliana]
Length = 390
Score = 780 bits (2013), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Frame = +1
Query: 319 MGKARGGRVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGV 498
MGKARGGRVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGV
Sbjct: 1 MGKARGGRVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGV 60
Query: 499 EIIPVPCSSSDNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVR 678
EIIPVPCSSSDNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVR
Sbjct: 61 EIIPVPCSSSDNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVR 120
Query: 679 FVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF 858
FVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF
Sbjct: 121 FVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF 180
Query: 859 RVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKV 1038
RVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKV
Sbjct: 181 RVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKV 240
Query: 1039 FTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFR 1218
FTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFR
Sbjct: 241 FTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFR 300
Query: 1219 CTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQ 1398
CTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQ
Sbjct: 301 CTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQ 360
Query: 1399 TNLRLSFRRLYEDGLSSPGIMSPHSPLLRA 1488
TNLRLSFRRLYEDGLSSPGIMSPHSPLLRA
Sbjct: 361 TNLRLSFRRLYEDGLSSPGIMSPHSPLLRA 390
>gb|AAL37504.1|AF338652_1 ACC synthase [Brassica oleracea var. italica]
Length = 369
Score = 667 bits (1721), Expect = 0.0
Identities = 326/372 (87%), Positives = 347/372 (92%)
Frame = +1
Query: 148 QMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGK 327
QMGLAENQLCLDLIK+W+KENP+AS+CT EG+HQFSDIANFQDYHGLK+FRQAIAHFMGK
Sbjct: 1 QMGLAENQLCLDLIKEWIKENPKASVCTPEGVHQFSDIANFQDYHGLKEFRQAIAHFMGK 60
Query: 328 ARGGRVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEII 507
ARGGRVTFDPER+VMSGGATGANETIMFCLADPGDVFL+PSPYYAAFDRDLRWRTGVEI+
Sbjct: 61 ARGGRVTFDPERIVMSGGATGANETIMFCLADPGDVFLVPSPYYAAFDRDLRWRTGVEIV 120
Query: 508 PVPCSSSDNFKLTVDAAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVT 687
PV CSSS+NFKLTV+A EWAYKKA ESNK VKGL+ TNPSNPLGT+LDKDTL NLVRFVT
Sbjct: 121 PVHCSSSNNFKLTVEAVEWAYKKAVESNKNVKGLLFTNPSNPLGTILDKDTLKNLVRFVT 180
Query: 688 RKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVG 867
+KNIHLVVDEIYAATVFAG + VSVAEVV D SEVN DLIHIVYSLSKDMGLPGFRVG
Sbjct: 181 KKNIHLVVDEIYAATVFAGENLVSVAEVVKD---SEVNADLIHIVYSLSKDMGLPGFRVG 237
Query: 868 IVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTT 1047
IVYS+NDSVVSCARKMSSFGLVSSQTQ MLASMLSDD FV NFLMESS+RLGIRH VFT
Sbjct: 238 IVYSYNDSVVSCARKMSSFGLVSSQTQFMLASMLSDDSFVGNFLMESSKRLGIRHGVFTL 297
Query: 1048 GIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTE 1227
G+KKA I CL S AGLF WMDLRHLLR RNSFESEIELWHIIID+VKLNVSPGSSF+CTE
Sbjct: 298 GLKKAGINCLISTAGLFVWMDLRHLLRVRNSFESEIELWHIIIDKVKLNVSPGSSFQCTE 357
Query: 1228 PGWFRICFANMD 1263
PGWFR+CFANMD
Sbjct: 358 PGWFRVCFANMD 369
>dbj|BAB89349.1| 1-aminocyclopropane-1-carboxylate synthase [Diospyros kaki]
Length = 488
Score = 665 bits (1716), Expect = 0.0
Identities = 325/494 (65%), Positives = 398/494 (79%), Gaps = 2/494 (0%)
Frame = +1
Query: 13 GKNKGAVLSKIATNNQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCLDLIK 192
G + +LSKIATN++HGENS YF GWKAYD +PFHL++NP+G+IQMGLAENQL DLI+
Sbjct: 8 GNHHHRLLSKIATNDEHGENSLYFHGWKAYDDNPFHLTQNPNGVIQMGLAENQLSFDLIE 67
Query: 193 DWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGRVTFDPERVVM 372
DW+K+N ASICT EG+H F +IANFQDYHGL +FR A+A FMGK RGGR FDP+R+VM
Sbjct: 68 DWMKKNQRASICTTEGVHMFKEIANFQDYHGLPEFRNAVAKFMGKVRGGRAEFDPKRIVM 127
Query: 373 SGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVD 552
GGATGANE +MFCLADPGD FL+PSPYY AFDRDLRWRTGV+++PV C SSD+F++T +
Sbjct: 128 GGGATGANELLMFCLADPGDAFLVPSPYYPAFDRDLRWRTGVKLLPVECKSSDSFRITRE 187
Query: 553 AAEWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAAT 732
A E AY+KA ESN +VKGLI+ NPSNPLGT++D++TL +LV FV KNIH V DEIYAAT
Sbjct: 188 ALEEAYEKASESNIRVKGLIIGNPSNPLGTIMDRNTLKSLVSFVNDKNIHFVCDEIYAAT 247
Query: 733 VFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARK 912
VF +F+SV+E++ ++D N+DLIH+VYSLSKDMG+PGFRVGIVYS+ND VV+CARK
Sbjct: 248 VFKQPEFISVSEIIQEMD---CNLDLIHVVYSLSKDMGMPGFRVGIVYSYNDEVVTCARK 304
Query: 913 MSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAG 1092
MSSFGLVSSQTQ +LASMLSDD+FV+ F+ ESSRRL RH+ FT G+K+ +I CL NAG
Sbjct: 305 MSSFGLVSSQTQHLLASMLSDDEFVERFIGESSRRLENRHRTFTEGLKEVEIKCLEGNAG 364
Query: 1093 LFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRICFANMDDDT 1272
LF WMDLR LL++ +FE+E ELW +II++VKLNVSPGSSF C+EPGWFR+CFANMDD+T
Sbjct: 365 LFCWMDLRPLLKEA-TFEAETELWKVIINQVKLNVSPGSSFHCSEPGWFRVCFANMDDET 423
Query: 1273 LHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSFR--RLYEDGLS 1446
+ VAL RI+ FV + K KA+ KK K Q NLRLSF R+YEDG
Sbjct: 424 VQVALQRIRTFVDEKKG--AGKAAPE---------KKKKQWQRNLRLSFSSGRIYEDGCL 472
Query: 1447 SPGIMSPHSPLLRA 1488
SP ++SPHSP+LRA
Sbjct: 473 SPHVLSPHSPMLRA 486
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 127
effective length of database: 259,129,699
effective search space used: 95618858931
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)