BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.2.C2
(1011 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_192057.1| putative inorganic phosphatase; protein id... 441 e-122
ref|NP_171613.1| soluble inorganic pyrophosphatase, putativ... 389 e-107
gb|AAD46520.1|AF149116_1 soluble inorganic pyrophosphatase ... 376 e-103
pir||C86141 protein T25K16.5 [imported] - Arabidopsis thali... 374 e-102
ref|NP_182209.1| putative inorganic pyrophosphatase; protei... 369 e-101
>ref|NP_192057.1| putative inorganic phosphatase; protein id: At4g01480.1, supported
by cDNA: gi_15450871, supported by cDNA: gi_20148676
[Arabidopsis thaliana]|gi|7436033|pir||T01946 inorganic
pyrophosphatase homolog F11O4.12 - Arabidopsis
thaliana|gi|3695383|gb|AAC62786.1| similar to inorganic
pyrophosphatase (Pfam: PF00719 Pyrophosphatase, E-value:
2.7e-88) [Arabidopsis
thaliana]|gi|7268191|emb|CAB77718.1| putative inorganic
phosphatase [Arabidopsis
thaliana]|gi|15450872|gb|AAK96707.1| similar to
inorganic pyrophosphatase [Arabidopsis
thaliana]|gi|20148677|gb|AAM10229.1| similar to
inorganic pyrophosphatase [Arabidopsis thaliana]
Length = 216
Score = 441 bits (1133), Expect = e-122
Identities = 216/216 (100%), Positives = 216/216 (100%)
Frame = +3
Query: 87 MNGEEVKTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIGPGAPVIFNVVIEIS 266
MNGEEVKTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIGPGAPVIFNVVIEIS
Sbjct: 1 MNGEEVKTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIGPGAPVIFNVVIEIS 60
Query: 267 KGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGC 446
KGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGC
Sbjct: 61 KGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGC 120
Query: 447 FLRARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFEDYKKNE 626
FLRARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFEDYKKNE
Sbjct: 121 FLRARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFEDYKKNE 180
Query: 627 NKEVAVNDFLQPGPAIEAIQYSMDLYAEYILHTLRR 734
NKEVAVNDFLQPGPAIEAIQYSMDLYAEYILHTLRR
Sbjct: 181 NKEVAVNDFLQPGPAIEAIQYSMDLYAEYILHTLRR 216
>ref|NP_171613.1| soluble inorganic pyrophosphatase, putative; protein id:
At1g01050.1, supported by cDNA: 124537., supported by
cDNA: gi_15450698, supported by cDNA: gi_16323128,
supported by cDNA: gi_17473934, supported by cDNA:
gi_20148452 [Arabidopsis
thaliana]|gi|15450699|gb|AAK96621.1| At1g01050/T25K16_5
[Arabidopsis thaliana]|gi|16323129|gb|AAL15299.1|
At1g01050/T25K16_5 [Arabidopsis
thaliana]|gi|17473935|gb|AAL38377.1| putative inorganic
pyrophosphatase [Arabidopsis
thaliana]|gi|20148453|gb|AAM10117.1| putative inorganic
pyrophosphatase [Arabidopsis
thaliana]|gi|21537232|gb|AAM61573.1| soluble inorganic
pyrophosphatase, putative [Arabidopsis
thaliana]|gi|24797046|gb|AAN64535.1| At1g01050/T25K16_5
[Arabidopsis thaliana]
Length = 212
Score = 389 bits (998), Expect = e-107
Identities = 192/213 (90%), Positives = 199/213 (93%)
Frame = +3
Query: 96 EEVKTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIGPGAPVIFNVVIEISKGS 275
EE K +Q +LQ P PRLNERILSSLS+RSVAAHPWHDLEIGPGAP IFNVV+EI+KGS
Sbjct: 3 EETKDNQ---RLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGS 59
Query: 276 KVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLR 455
KVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLR
Sbjct: 60 KVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLR 119
Query: 456 ARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFEDYKKNENKE 635
ARAIGLMPMIDQGEKDDKIIAVCVDDPEYKH T+I ELPPHRLSEIRRFFEDYKKNENKE
Sbjct: 120 ARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNENKE 179
Query: 636 VAVNDFLQPGPAIEAIQYSMDLYAEYILHTLRR 734
VAVNDFL A+EAIQYSMDLYAEYILHTLRR
Sbjct: 180 VAVNDFLPSESAVEAIQYSMDLYAEYILHTLRR 212
>gb|AAD46520.1|AF149116_1 soluble inorganic pyrophosphatase [Populus tremula x Populus
tremuloides]
Length = 215
Score = 376 bits (966), Expect = e-103
Identities = 181/210 (86%), Positives = 195/210 (92%)
Frame = +3
Query: 105 KTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIGPGAPVIFNVVIEISKGSKVK 284
KT + + + ++ PRLNERILSSLS+R+VAAHPWHDLEIGPGAP IFNVV+EI+KGSKVK
Sbjct: 6 KTQENEVETKHQAPRLNERILSSLSRRTVAAHPWHDLEIGPGAPHIFNVVVEITKGSKVK 65
Query: 285 YELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLRARA 464
YELDKKTGLIKVDRILYSSVVYPHNYGF+PRTLCEDNDP+DVLV+MQEPVLPGCFLRARA
Sbjct: 66 YELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARA 125
Query: 465 IGLMPMIDQGEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFEDYKKNENKEVAV 644
IGLMPMIDQGEKDDKIIAVC DDPEYKH T+I EL PHRLSEIRRFFEDYKKNENKEVAV
Sbjct: 126 IGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELAPHRLSEIRRFFEDYKKNENKEVAV 185
Query: 645 NDFLQPGPAIEAIQYSMDLYAEYILHTLRR 734
NDFL A+EAIQYSMDLYAEYILHTLRR
Sbjct: 186 NDFLPSNTAVEAIQYSMDLYAEYILHTLRR 215
>pir||C86141 protein T25K16.5 [imported] - Arabidopsis
thaliana|gi|6715648|gb|AAF26475.1|AC007323_16 T25K16.5
[Arabidopsis thaliana]
Length = 230
Score = 374 bits (960), Expect = e-102
Identities = 191/231 (82%), Positives = 198/231 (85%), Gaps = 18/231 (7%)
Frame = +3
Query: 96 EEVKTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIGPGAPVIFNVVIEISKGS 275
EE K +Q +LQ P PRLNERILSSLS+RSVAAHPWHDLEIGPGAP IFNVV+EI+KGS
Sbjct: 3 EETKDNQ---RLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGS 59
Query: 276 KVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLR 455
KVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLR
Sbjct: 60 KVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLR 119
Query: 456 ARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFED-------- 611
ARAIGLMPMIDQGEKDDKIIAVCVDDPEYKH T+I ELPPHRLSEIRRFFED
Sbjct: 120 ARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDCILFLQCS 179
Query: 612 ----------YKKNENKEVAVNDFLQPGPAIEAIQYSMDLYAEYILHTLRR 734
KKNENKEVAVNDFL A+EAIQYSMDLYAEYILHTLRR
Sbjct: 180 SLFISIDLSTNKKNENKEVAVNDFLPSESAVEAIQYSMDLYAEYILHTLRR 230
>ref|NP_182209.1| putative inorganic pyrophosphatase; protein id: At2g46860.1
[Arabidopsis thaliana]|gi|7436034|pir||T02201 probable
inorganic diphosphatase (EC 3.6.1.1) - Arabidopsis
thaliana|gi|3522960|gb|AAC34242.1| putative inorganic
pyrophosphatase [Arabidopsis
thaliana]|gi|20197320|gb|AAM15021.1| putative inorganic
pyrophosphatase [Arabidopsis thaliana]
Length = 216
Score = 369 bits (946), Expect = e-101
Identities = 177/216 (81%), Positives = 194/216 (88%)
Frame = +3
Query: 87 MNGEEVKTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIGPGAPVIFNVVIEIS 266
M+ E + +Q + P P+LNERILS+LS+RSVAAHPWHDLEIGP AP++FNVV+EI+
Sbjct: 1 MSEEAYEETQESSQSPRPVPKLNERILSTLSRRSVAAHPWHDLEIGPEAPLVFNVVVEIT 60
Query: 267 KGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGC 446
KGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGF+PRTLCEDNDP+DVLV+MQEPVLPGC
Sbjct: 61 KGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGC 120
Query: 447 FLRARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFEDYKKNE 626
FLRARAIGLMPMIDQGEKDDKIIAVC DDPEYKH T+I +L PHRL EIRRFFEDYKKNE
Sbjct: 121 FLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHFTDIKQLAPHRLQEIRRFFEDYKKNE 180
Query: 627 NKEVAVNDFLQPGPAIEAIQYSMDLYAEYILHTLRR 734
NK+VAVNDFL A EAIQYSMDLYAEYILHTLRR
Sbjct: 181 NKKVAVNDFLPSESAHEAIQYSMDLYAEYILHTLRR 216
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 123
effective length of database: 264,485,883
effective search space used: 56335493079
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)