BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PTA.sd.12.C1
         (737 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC42821.1|  unknown protein [Arabidopsis thaliana]           175   7e-43
ref|NP_171625.1|  unknown protein; protein id: At1g01170.1 [...   173   2e-42
gb|AAF26466.1|AC007323_7  T25K16.16 [Arabidopsis thaliana]        164   2e-39
ref|NP_191995.1|  stress-induced protein OZI1 precursor; pro...   130   2e-29
dbj|BAA92728.1|  ESTs AU082419(E61744),AU031498(E61744) corr...   122   5e-27

>dbj|BAC42821.1| unknown protein [Arabidopsis thaliana]
          Length = 83

 Score =  175 bits (443), Expect = 7e-43
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = +1

Query: 97  MASGGKAKYIIGALIGSYGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPR 276
           MASGGKAKYIIGALIGSYGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPR
Sbjct: 1   MASGGKAKYIIGALIGSYGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPR 60

Query: 277 TAGPPVVMNPISRQNFIVKTRPE 345
           TAGPPVVMNPISRQNFIVKTRPE
Sbjct: 61  TAGPPVVMNPISRQNFIVKTRPE 83



>ref|NP_171625.1| unknown protein; protein id: At1g01170.1 [Arabidopsis thaliana]
          Length = 83

 Score =  173 bits (439), Expect = 2e-42
 Identities = 82/83 (98%), Positives = 83/83 (99%)
 Frame = +1

Query: 97  MASGGKAKYIIGALIGSYGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPR 276
           MASGGKAKYIIGALIGS+GISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPR
Sbjct: 1   MASGGKAKYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPR 60

Query: 277 TAGPPVVMNPISRQNFIVKTRPE 345
           TAGPPVVMNPISRQNFIVKTRPE
Sbjct: 61  TAGPPVVMNPISRQNFIVKTRPE 83



>gb|AAF26466.1|AC007323_7 T25K16.16 [Arabidopsis thaliana]
          Length = 97

 Score =  164 bits (414), Expect = 2e-39
 Identities = 82/97 (84%), Positives = 83/97 (85%), Gaps = 14/97 (14%)
 Frame = +1

Query: 97  MASGGKAKYIIGALIGSYGISYIFDKVISDNKIFGG--------------TTPGTVSNKE 234
           MASGGKAKYIIGALIGS+GISYIFDKVISDNKIFGG              TTPGTVSNKE
Sbjct: 1   MASGGKAKYIIGALIGSFGISYIFDKVISDNKIFGGKDDLNGYLLVKISGTTPGTVSNKE 60

Query: 235 WWAATDEKFQAWPRTAGPPVVMNPISRQNFIVKTRPE 345
           WWAATDEKFQAWPRTAGPPVVMNPISRQNFIVKTRPE
Sbjct: 61  WWAATDEKFQAWPRTAGPPVVMNPISRQNFIVKTRPE 97



>ref|NP_191995.1| stress-induced protein OZI1 precursor; protein id: At4g00860.1,
           supported by cDNA: gi_20260203, supported by cDNA:
           gi_790582 [Arabidopsis thaliana]|gi|2129742|pir||S59544
           stress-induced protein OZI1 precursor - Arabidopsis
           thaliana|gi|790583|gb|AAA91976.1| mRNA corresponding to
           this gene accumulates in response to ozone stress and
           pathogen (bacterial) infection; putative
           pathogenesis-related protein|gi|2252869|gb|AAB62867.1|
           AT0ZI1 gene product [Arabidopsis
           thaliana]|gi|7267425|emb|CAB80895.1| stress-induced
           protein OZI1 precursor [Arabidopsis
           thaliana]|gi|20260204|gb|AAM13000.1| stress-induced
           protein OZI1 precursor [Arabidopsis
           thaliana]|gi|21387039|gb|AAM47923.1| stress-induced
           protein OZI1 precursor [Arabidopsis thaliana]
          Length = 80

 Score =  130 bits (327), Expect = 2e-29
 Identities = 59/78 (75%), Positives = 70/78 (89%)
 Frame = +1

Query: 112 KAKYIIGALIGSYGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPP 291
           +A YIIGAL GS  ++Y+ DKVISD+K+FGGTTPGT++NKEW AAT+E+ QAWPR AGPP
Sbjct: 3   RATYIIGALAGSAVVAYVCDKVISDDKLFGGTTPGTITNKEWGAATEERLQAWPRVAGPP 62

Query: 292 VVMNPISRQNFIVKTRPE 345
           VVMNPISRQNFIVK+RPE
Sbjct: 63  VVMNPISRQNFIVKSRPE 80



>dbj|BAA92728.1| ESTs AU082419(E61744),AU031498(E61744) correspond to a region of
           the predicted gene.~Similar to Arabidopsis thaliana
           putative pathogenesis-related protein (U20347) [Oryza
           sativa (japonica cultivar-group)]
          Length = 79

 Score =  122 bits (306), Expect = 5e-27
 Identities = 55/72 (76%), Positives = 62/72 (85%)
 Frame = +1

Query: 118 KYIIGALIGSYGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPVV 297
           KYI   L+GS+ ISY+ D  I++ KIFGGTTP TVS+KEWW ATD+KFQAWPRTAGPPVV
Sbjct: 4   KYIAAGLVGSFAISYVCDHFIAEKKIFGGTTPHTVSDKEWWQATDKKFQAWPRTAGPPVV 63

Query: 298 MNPISRQNFIVK 333
           MNPISRQNFIVK
Sbjct: 64  MNPISRQNFIVK 75



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 120
effective length of database: 268,503,021
effective search space used: 33562877625
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)