BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.1.C1
(5818 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171612.1| DEAD/DEAH box helicase carpel factory (CAF... 2721 0.0
gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana] 2716 0.0
gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana] 2653 0.0
gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativ... 1753 0.0
ref|NP_189978.1| putative protein; protein id: At3g43920.1 ... 273 e-114
>ref|NP_171612.1| DEAD/DEAH box helicase carpel factory (CAF); protein id: At1g01040.1,
supported by cDNA: gi_11559644, supported by cDNA:
gi_6102609 [Arabidopsis
thaliana]|gi|11559645|gb|AAG38019.1|AF292940_1 short
integuments 1 [Arabidopsis
thaliana]|gi|11559647|gb|AAG38020.1|AF292941_1 short
integuments 1 [Arabidopsis thaliana]
Length = 1909
Score = 2721 bits (7052), Expect(3) = 0.0
Identities = 1363/1390 (98%), Positives = 1363/1390 (98%)
Frame = +1
Query: 1 MVMEDEPREATIKPSYWLDACEDISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGI 180
MVMEDEPREATIKPSYWLDACEDISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGI
Sbjct: 1 MVMEDEPREATIKPSYWLDACEDISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGI 60
Query: 181 DHILDSIKNGGGLPNNGVSDTNSQINEVTVTPQVIAKETVKENGLQKNGGKRDEFSKEEG 360
DHILDSIKNGGGLPNNGVSDTNSQINEVTVTPQVIAKETVKENGLQKNGGKRDEFSKEEG
Sbjct: 61 DHILDSIKNGGGLPNNGVSDTNSQINEVTVTPQVIAKETVKENGLQKNGGKRDEFSKEEG 120
Query: 361 DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNKKKRECNNYRR 540
DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNKKKRECNNYRR
Sbjct: 121 DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNKKKRECNNYRR 180
Query: 541 DGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKPXXX 720
DGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKP
Sbjct: 181 DGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKPEER 240
Query: 721 XXXXXXXQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSV 900
QARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSV
Sbjct: 241 KEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSV 300
Query: 901 FLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLN 1080
FLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLN
Sbjct: 301 FLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLN 360
Query: 1081 ILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKG 1260
ILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKG
Sbjct: 361 ILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKG 420
Query: 1261 VSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQ 1440
VSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQ
Sbjct: 421 VSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQ 480
Query: 1441 MIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYT 1620
MIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYT
Sbjct: 481 MIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYT 540
Query: 1621 LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCXXXXXXXXXXXX 1800
LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQC
Sbjct: 541 LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVA 600
Query: 1801 XXXXXPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ 1980
PENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ
Sbjct: 601 AEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ 660
Query: 1981 HTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQDTISKFR 2160
HTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQDTISKFR
Sbjct: 661 HTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQDTISKFR 720
Query: 2161 DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 2340
DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV
Sbjct: 721 DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 780
Query: 2341 SHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSA 2520
SHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSA
Sbjct: 781 SHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSA 840
Query: 2521 VGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSM 2700
VGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSM
Sbjct: 841 VGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSM 900
Query: 2701 RLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEG 2880
RLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEG
Sbjct: 901 RLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEG 960
Query: 2881 VADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAE 3060
VADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAE
Sbjct: 961 VADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAE 1020
Query: 3061 VLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWD 3240
VLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWD
Sbjct: 1021 VLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWD 1080
Query: 3241 PAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDR 3420
PAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDR
Sbjct: 1081 PAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDR 1140
Query: 3421 REYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLM 3600
REYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLM
Sbjct: 1141 REYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLM 1200
Query: 3601 MADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYK 3780
MADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYK
Sbjct: 1201 MADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYK 1260
Query: 3781 QKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELCVVHPLS 3960
QKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELCVVHPLS
Sbjct: 1261 QKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELCVVHPLS 1320
Query: 3961 GSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERAELL 4140
GSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERAELL
Sbjct: 1321 GSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERAELL 1380
Query: 4141 GDAYLKWVVS 4170
GDAYLKWVVS
Sbjct: 1381 GDAYLKWVVS 1390
Score = 670 bits (1729), Expect(3) = 0.0
Identities = 339/357 (94%), Positives = 340/357 (94%)
Frame = +3
Query: 4170 SGFRFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 4349
S F FLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV
Sbjct: 1390 SRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 1449
Query: 4350 FDEDTKDGGSSFFDEEQKPVSEENSDVFXXXXXXXXXXXXXXSSYRVLSSKTLADVVEAL 4529
FDEDTKDGGSSFFDEEQKPVSEENSDVF SSYRVLSSKTLADVVEAL
Sbjct: 1450 FDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEAL 1509
Query: 4530 IGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYE 4709
IGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYE
Sbjct: 1510 IGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYE 1569
Query: 4710 FKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRA 4889
FKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRA
Sbjct: 1570 FKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRA 1629
Query: 4890 AAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPK 5069
AAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPK
Sbjct: 1630 AAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPK 1689
Query: 5070 VLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQERYKQQA 5240
VLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQER +QQA
Sbjct: 1690 VLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQERCQQQA 1746
Score = 235 bits (599), Expect(3) = 0.0
Identities = 119/163 (73%), Positives = 119/163 (73%)
Frame = +1
Query: 5242 EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMXXXXXXXXXXXXXXXXXXXXXXXXH 5421
EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKM H
Sbjct: 1747 EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIAESKEKH 1806
Query: 5422 IXXXXXXXXXXXXXXXXXXXXHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF 5601
I HQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF
Sbjct: 1807 INNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF 1866
Query: 5602 GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS 5730
GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS
Sbjct: 1867 GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS 1909
Score = 52.4 bits (124), Expect = 8e-05
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Frame = +3
Query: 4680 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 4859
V L+ + Y +L EA+T AS + CY+R E +GDA L +++R LF Y
Sbjct: 1344 VQLKNLISYPIPTSKIL-EALTAASCQET--FCYERAELLGDAYLKWVVSRFLFLKYPQK 1400
Query: 4860 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 5039
G+LT +R V+N + A+ L Y++ A + V V E +K G +S
Sbjct: 1401 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSS 1460
Query: 5040 FGLGDCK------------------------------APKVLGDIVESIAGAIFLDSGK 5126
F + K + K L D+VE++ G +++ GK
Sbjct: 1461 FFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGK 1519
>gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana]
Length = 1909
Score = 2716 bits (7041), Expect(3) = 0.0
Identities = 1361/1390 (97%), Positives = 1362/1390 (97%)
Frame = +1
Query: 1 MVMEDEPREATIKPSYWLDACEDISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGI 180
MVMEDEPREATIKPSYWLDACEDISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGI
Sbjct: 1 MVMEDEPREATIKPSYWLDACEDISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGI 60
Query: 181 DHILDSIKNGGGLPNNGVSDTNSQINEVTVTPQVIAKETVKENGLQKNGGKRDEFSKEEG 360
DHILDSIKNGGGLPNNGVSDTNSQINEVTVTPQVIAKETVKENGLQKNGGKRDEFSKEEG
Sbjct: 61 DHILDSIKNGGGLPNNGVSDTNSQINEVTVTPQVIAKETVKENGLQKNGGKRDEFSKEEG 120
Query: 361 DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNKKKRECNNYRR 540
DKDRKRARVCSYQSERSNLSGRGHVNN REGDRFMNRKRTRNWDEAGNNKKKRECNNYRR
Sbjct: 121 DKDRKRARVCSYQSERSNLSGRGHVNNFREGDRFMNRKRTRNWDEAGNNKKKRECNNYRR 180
Query: 541 DGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKPXXX 720
DGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKP
Sbjct: 181 DGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKPEER 240
Query: 721 XXXXXXXQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSV 900
QARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSV
Sbjct: 241 KEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSV 300
Query: 901 FLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLN 1080
FLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLN
Sbjct: 301 FLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLN 360
Query: 1081 ILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKG 1260
ILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKG
Sbjct: 361 ILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKG 420
Query: 1261 VSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQ 1440
VSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQ
Sbjct: 421 VSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQ 480
Query: 1441 MIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYT 1620
MIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYT
Sbjct: 481 MIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYT 540
Query: 1621 LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCXXXXXXXXXXXX 1800
LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQC
Sbjct: 541 LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVA 600
Query: 1801 XXXXXPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ 1980
PENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ
Sbjct: 601 AEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ 660
Query: 1981 HTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQDTISKFR 2160
HTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQDTISKFR
Sbjct: 661 HTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQDTISKFR 720
Query: 2161 DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 2340
DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV
Sbjct: 721 DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 780
Query: 2341 SHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSA 2520
SHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSA
Sbjct: 781 SHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSA 840
Query: 2521 VGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSM 2700
VGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSM
Sbjct: 841 VGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSM 900
Query: 2701 RLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEG 2880
RLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEG
Sbjct: 901 RLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEG 960
Query: 2881 VADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAE 3060
VADVLKGEWVSSGKEVCESSKLFHLYM+NVRCVDFGSSKDPFLSEVSEFAILFGNELDAE
Sbjct: 961 VADVLKGEWVSSGKEVCESSKLFHLYMHNVRCVDFGSSKDPFLSEVSEFAILFGNELDAE 1020
Query: 3061 VLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWD 3240
VLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWD
Sbjct: 1021 VLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWD 1080
Query: 3241 PAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDR 3420
PAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDR
Sbjct: 1081 PAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDR 1140
Query: 3421 REYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLM 3600
REYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLM
Sbjct: 1141 REYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLM 1200
Query: 3601 MADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYK 3780
MADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYK
Sbjct: 1201 MADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYK 1260
Query: 3781 QKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELCVVHPLS 3960
QKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELCVVHPLS
Sbjct: 1261 QKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELCVVHPLS 1320
Query: 3961 GSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERAELL 4140
GSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERAELL
Sbjct: 1321 GSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERAELL 1380
Query: 4141 GDAYLKWVVS 4170
GDAYLKWVVS
Sbjct: 1381 GDAYLKWVVS 1390
Score = 670 bits (1729), Expect(3) = 0.0
Identities = 339/357 (94%), Positives = 340/357 (94%)
Frame = +3
Query: 4170 SGFRFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 4349
S F FLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV
Sbjct: 1390 SRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 1449
Query: 4350 FDEDTKDGGSSFFDEEQKPVSEENSDVFXXXXXXXXXXXXXXSSYRVLSSKTLADVVEAL 4529
FDEDTKDGGSSFFDEEQKPVSEENSDVF SSYRVLSSKTLADVVEAL
Sbjct: 1450 FDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEAL 1509
Query: 4530 IGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYE 4709
IGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYE
Sbjct: 1510 IGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYE 1569
Query: 4710 FKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRA 4889
FKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRA
Sbjct: 1570 FKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRA 1629
Query: 4890 AAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPK 5069
AAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPK
Sbjct: 1630 AAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPK 1689
Query: 5070 VLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQERYKQQA 5240
VLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQER +QQA
Sbjct: 1690 VLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQERCQQQA 1746
Score = 235 bits (599), Expect(3) = 0.0
Identities = 119/163 (73%), Positives = 119/163 (73%)
Frame = +1
Query: 5242 EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMXXXXXXXXXXXXXXXXXXXXXXXXH 5421
EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKM H
Sbjct: 1747 EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIAESKEKH 1806
Query: 5422 IXXXXXXXXXXXXXXXXXXXXHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF 5601
I HQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF
Sbjct: 1807 INNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF 1866
Query: 5602 GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS 5730
GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS
Sbjct: 1867 GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS 1909
Score = 52.4 bits (124), Expect = 8e-05
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Frame = +3
Query: 4680 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 4859
V L+ + Y +L EA+T AS + CY+R E +GDA L +++R LF Y
Sbjct: 1344 VQLKNLISYPIPTSKIL-EALTAASCQET--FCYERAELLGDAYLKWVVSRFLFLKYPQK 1400
Query: 4860 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 5039
G+LT +R V+N + A+ L Y++ A + V V E +K G +S
Sbjct: 1401 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSS 1460
Query: 5040 FGLGDCK------------------------------APKVLGDIVESIAGAIFLDSGK 5126
F + K + K L D+VE++ G +++ GK
Sbjct: 1461 FFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGK 1519
>gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
Length = 2024
Score = 2653 bits (6877), Expect(3) = 0.0
Identities = 1358/1478 (91%), Positives = 1361/1478 (91%), Gaps = 88/1478 (5%)
Frame = +1
Query: 1 MVMEDEPREATIKPSYWLDACEDISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGI 180
MVMEDEPREATIKPSYWLDACEDISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGI
Sbjct: 1 MVMEDEPREATIKPSYWLDACEDISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGI 60
Query: 181 DHILDSIKNGGGLPNNGVSDTNSQINEVTVTPQVIAKETVKENGLQKNGGKRDEFSKEEG 360
DHILDSIKNGGGLPNNGVSDTNSQINEVTVTPQVIAKETVKENGLQKNGGKRDEFSKEEG
Sbjct: 61 DHILDSIKNGGGLPNNGVSDTNSQINEVTVTPQVIAKETVKENGLQKNGGKRDEFSKEEG 120
Query: 361 DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNKKKRECNNYRR 540
DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNKKKRECNNYRR
Sbjct: 121 DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNKKKRECNNYRR 180
Query: 541 DGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKPXXX 720
DGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKP
Sbjct: 181 DGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKPEER 240
Query: 721 XXXXXXXQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSV 900
QARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSV
Sbjct: 241 KEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSV 300
Query: 901 FLVPKVPLVYQ-------QAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQ---- 1047
FLVPKVPLVYQ QAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQ
Sbjct: 301 FLVPKVPLVYQVPPNKKHQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQFLKL 360
Query: 1048 ----------VLVMTAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHT 1197
VLVMTAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHT
Sbjct: 361 TSFFLFSSTQVLVMTAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHT 420
Query: 1198 TPKDKRPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPS 1377
TPKDKRPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPS
Sbjct: 421 TPKDKRPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPS 480
Query: 1378 EIVVEYDKAATMWSLHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVS 1557
EIVVEYDKAATMWSLHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVS
Sbjct: 481 EIVVEYDKAATMWSLHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVS 540
Query: 1558 ERTESDGAANLIHKLRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYL 1737
ERTESDGAANLIHKLRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYL
Sbjct: 541 ERTESDGAANLIHKLRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYL 600
Query: 1738 SEVVSLLQCXXXXXXXXXXXXXXXXXPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAA 1917
SEVVSLLQC PENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAA
Sbjct: 601 SEVVSLLQCELLEGAAAEKVAAEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAA 660
Query: 1918 VADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKV----FAELPSLSFIRC 2085
VADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKV FAELPSLSFIRC
Sbjct: 661 VADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVRIKVFAELPSLSFIRC 720
Query: 2086 ASMIGHNNSQEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVL 2265
ASMIGHNNSQEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVL
Sbjct: 721 ASMIGHNNSQEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVL 780
Query: 2266 AYIQSRGRARKPGSDYILMVER------------------------------GNVSHAAF 2355
AYIQSRGRARKPGSDYILMVER GNVSHAAF
Sbjct: 781 AYIQSRGRARKPGSDYILMVERYIKSFKNYILIFVTTGHQISTDMSTCVTCRGNVSHAAF 840
Query: 2356 LRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSAVGLVH 2535
LRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSAVGLVH
Sbjct: 841 LRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSAVGLVH 900
Query: 2536 FYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQ 2715
FYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQ
Sbjct: 901 FYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQ 960
Query: 2716 A-VCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEGVADV 2892
+ ++ACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEGVADV
Sbjct: 961 VDIIVSACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEGVADV 1020
Query: 2893 LKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAEVLSM 3072
LKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAEVLSM
Sbjct: 1021 LKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAEVLSM 1080
Query: 3073 SMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWDPAKA 3252
SMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWDPAKA
Sbjct: 1081 SMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWDPAKA 1140
Query: 3253 YLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDRREYG 3432
YLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDRREYG
Sbjct: 1141 YLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDRREYG 1200
Query: 3433 FGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLMMADG 3612
FGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLMMADG
Sbjct: 1201 FGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLMMADG 1260
Query: 3613 CMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQK-- 3786
CMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQK
Sbjct: 1261 CMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKIY 1320
Query: 3787 ------------------------------YGVDLNCKQQPLIKGRGVSYCKNLLSPRFE 3876
YGVDLNCKQQPLIKGRGVSYCKNLLSPRFE
Sbjct: 1321 VVQDRLFFYFLHNLRLLRLYKSSSIMLFIRYGVDLNCKQQPLIKGRGVSYCKNLLSPRFE 1380
Query: 3877 QSGESETVLDKTYYVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISY 4056
QSGESETVLDKTYYVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISY
Sbjct: 1381 QSGESETVLDKTYYVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISY 1440
Query: 4057 PIPTSKILEALTAASCQETFCYERAELLGDAYLKWVVS 4170
PIPTSKILEALTAASCQETFCYERAELLGDAYLKWVVS
Sbjct: 1441 PIPTSKILEALTAASCQETFCYERAELLGDAYLKWVVS 1478
Score = 655 bits (1691), Expect(3) = 0.0
Identities = 339/384 (88%), Positives = 340/384 (88%), Gaps = 27/384 (7%)
Frame = +3
Query: 4170 SGFRFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 4349
S F FLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV
Sbjct: 1478 SRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 1537
Query: 4350 FDEDTKDGGSSFFDEEQKPVSEENSDVFXXXXXXXXXXXXXXSSYRVLSSKTLADVVEAL 4529
FDEDTKDGGSSFFDEEQKPVSEENSDVF SSYRVLSSKTLADVVEAL
Sbjct: 1538 FDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEAL 1597
Query: 4530 IGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYE 4709
IGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYE
Sbjct: 1598 IGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYE 1657
Query: 4710 FKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRA 4889
FKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRA
Sbjct: 1658 FKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRA 1717
Query: 4890 AAVNNENFARVAVKHKLHLYLRHGSSALEK---------------------------QIR 4988
AAVNNENFARVAVKHKLHLYLRHGSSALEK QIR
Sbjct: 1718 AAVNNENFARVAVKHKLHLYLRHGSSALEKQVNKIKKQSILFSKSFKCLTVWLLFVFQIR 1777
Query: 4989 EFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQ 5168
EFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQ
Sbjct: 1778 EFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQ 1837
Query: 5169 PMVTPETLPMHPVRELQERYKQQA 5240
PMVTPETLPMHPVRELQER +QQA
Sbjct: 1838 PMVTPETLPMHPVRELQERCQQQA 1861
Score = 235 bits (599), Expect(3) = 0.0
Identities = 119/163 (73%), Positives = 119/163 (73%)
Frame = +1
Query: 5242 EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMXXXXXXXXXXXXXXXXXXXXXXXXH 5421
EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKM H
Sbjct: 1862 EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIAESKEKH 1921
Query: 5422 IXXXXXXXXXXXXXXXXXXXXHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF 5601
I HQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF
Sbjct: 1922 INNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF 1981
Query: 5602 GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS 5730
GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS
Sbjct: 1982 GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS 2024
Score = 52.4 bits (124), Expect = 8e-05
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Frame = +3
Query: 4680 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 4859
V L+ + Y +L EA+T AS + CY+R E +GDA L +++R LF Y
Sbjct: 1432 VQLKNLISYPIPTSKIL-EALTAASCQET--FCYERAELLGDAYLKWVVSRFLFLKYPQK 1488
Query: 4860 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 5039
G+LT +R V+N + A+ L Y++ A + V V E +K G +S
Sbjct: 1489 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSS 1548
Query: 5040 FGLGDCK------------------------------APKVLGDIVESIAGAIFLDSGK 5126
F + K + K L D+VE++ G +++ GK
Sbjct: 1549 FFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGK 1607
>gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa (japonica cultivar-group)]
Length = 1883
Score = 1753 bits (4539), Expect(3) = 0.0
Identities = 920/1425 (64%), Positives = 1081/1425 (75%), Gaps = 49/1425 (3%)
Frame = +1
Query: 43 SYWLDACED---ISCDLIDDLVSEFDPSSVAVNESTDENGVINDFFGGIDHILDSIKNGG 213
+YW DACED + C + ++FDP + ++ ++G F ID IL+SI
Sbjct: 18 AYWYDACEDGASLLCGIDFAASADFDPGLIPAMDTGADDG----FVAEIDRILESINAES 73
Query: 214 GL------------------PNNGVSDTNSQINEVTVTPQVIA--------------KET 297
P + + Q+ V +A KE
Sbjct: 74 SPAPPPPPPPPLPEPVPVAPPELPIQEKQLQVASAPVANNAVAVVGVVQRSKGVVARKEP 133
Query: 298 VKEN-GLQKNGGKRDEFSKEEGDKDRKRARVCSYQSERSNLSGRGHVNNSREGDR---FM 465
+E+ G NGG E+ +D KR R+ S G V R+ R +
Sbjct: 134 RRESHGCAANGGGGGEW------RDGKRPRLAS-----------GGVGGPRQEWRRRPML 176
Query: 466 NRKRTRNWDEAGNNKKKRECNNYRR-DGRDREVRGYWERDKVGSNELVYRSGTWEADHER 642
+R WD+ + +R+ + R+ + RE RG+WERD+ G ++V+RSGTWE + +R
Sbjct: 177 PPPPSRGWDD---RRGRRDFDRVRKHEHHRREARGFWERDRGG--KMVFRSGTWEQESDR 231
Query: 643 DVKKV---SGGNRECDVKAEENKSKPXXXXXXXXXXQARRYQLDVLEQAKAKNTIAFLET 813
+ K+ GG+ E KAE ++ +AR+YQL+VLEQAK++NTIAFLET
Sbjct: 232 EAKRARTQDGGSME--KKAEADRMGAAQREKPVAEERARQYQLEVLEQAKSRNTIAFLET 289
Query: 814 GAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEM 993
GAGKTLIA+LLIKSV ++ +N+KML+VFLVPKVPLVYQ
Sbjct: 290 GAGKTLIAVLLIKSVCDKMLKENKKMLAVFLVPKVPLVYQ-------------------- 329
Query: 994 GQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSL 1173
VLVMTAQILLNILRHSII+M+ I LLILDECHHAVKKHPYSL
Sbjct: 330 ------------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSL 371
Query: 1174 VMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKEL 1353
VMSEFYHTTPK+KRPA+FGMTASPVNLKGV+SQ DCAIKIRNLE+KLDS VCTIKDRKEL
Sbjct: 372 VMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKEL 431
Query: 1354 EKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDE 1533
EKHVPMP E+VV+YDKAAT+WSLHE IKQM + VEEAA +SS+++KWQFMGARDAG++DE
Sbjct: 432 EKHVPMPLEVVVQYDKAATLWSLHEQIKQMESTVEEAALSSSKRTKWQFMGARDAGSRDE 491
Query: 1534 LRQVYGVSERTESDGAANLIHKLRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVD 1713
LR VYGVSERTESDGAANLI KLRAINY L ELGQWCAYKV QSFL+ALQ+DER N+QVD
Sbjct: 492 LRLVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQVD 551
Query: 1714 VKFQESYLSEVVSLLQCXXXXXXXXXXXXXXXXXPENGNAHD--EMEEGELPDDPVVSGG 1887
VKFQESYL +VV LL C +N H+ ++EEGELPD S G
Sbjct: 552 VKFQESYLKKVVDLLHCQLTEGAAMKSETSDVEM-QNTEKHNTNDLEEGELPD----SHG 606
Query: 1888 EHVDEVIGAAVADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPS 2067
EHVDEVIGAAVADGKVTP+VQ+LIK+LLKYQHT DFRAI+FVERVV ALVLPKV AELPS
Sbjct: 607 EHVDEVIGAAVADGKVTPRVQALIKILLKYQHTEDFRAIIFVERVVTALVLPKVLAELPS 666
Query: 2068 LSFIRCASMIGHNNSQEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFD 2247
LSFIRCAS+IGHNN+QEM++ QMQDTISKFRDG VTLLVATSVAEEGLDIRQCNVV+RFD
Sbjct: 667 LSFIRCASLIGHNNNQEMRACQMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFD 726
Query: 2248 LAKTVLAYIQSRGRARKPGSDYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHL 2427
LAKTVLAYIQSRGRARKPGSDYILM+ERGN+SH FLRNARNSEETLRKEA+ERTDLSHL
Sbjct: 727 LAKTVLAYIQSRGRARKPGSDYILMLERGNISHETFLRNARNSEETLRKEAMERTDLSHL 786
Query: 2428 KDTSRLISIDAVPGTVYKVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHE 2607
TS L +D PG++Y+VE+TGA+VSLNSAVGL+HFYCSQLP DRY+IL PEF M+K+E
Sbjct: 787 DGTSVLSPVDTSPGSMYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILHPEFIMQKYE 846
Query: 2608 KPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 2787
KPGG EYSC+LQLPCNAPFE LEGP+CSS+RLAQQAVCLAACKKLHEMGAFTD LLPD+
Sbjct: 847 KPGGSVEYSCKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDTLLPDR 906
Query: 2788 GSGQDAEKADQDDEGEPVPGTARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYN 2967
GSG + EK +Q+DEGEP+PGTARHREFYPEGVAD+L+GEW+ SG++ ++S+ LYMY+
Sbjct: 907 GSG-EGEKTEQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQNSQFIKLYMYS 965
Query: 2968 VRCVDFGSSKDPFLSEVSEFAILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDIT 3147
V CV+ G+SKDPF++++S FAI+FGNELDAEVLS +MDL+VAR MITKASL F+G ++IT
Sbjct: 966 VNCVNVGTSKDPFVTQLSNFAIIFGNELDAEVLSTTMDLFVARTMITKASLVFRGRIEIT 1025
Query: 3148 ENQLSSLKKFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEK 3327
E+QL LK FHVRLMSIVLDVDV+PSTTPWDPAKAYLFVPV +P++ I+W LV
Sbjct: 1026 ESQLVLLKSFHVRLMSIVLDVDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDWTLVNN 1085
Query: 3328 ITKTTAWDNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVA 3507
I T AW+NPLQRARPDVYLGTNERTLGGDRREYGFGKLRH FGQK+HPTYGIRGA+A
Sbjct: 1086 IVNTDAWNNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGTAFGQKAHPTYGIRGAIA 1145
Query: 3508 SFDVVRASGLLPVRDAFEKEVEEDLSKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDS 3687
FD+V+ASGL+P RD + ++GKL MAD C A+DL G +VTAAHSGKRFYVD
Sbjct: 1146 EFDIVKASGLVPARD--RGHFSDYQNQGKLFMADSCWNAKDLAGMVVTAAHSGKRFYVDC 1203
Query: 3688 ICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSP 3867
ICY+M+AE SFPRKEGYLGPLEY++YADYYKQKYGV+L ++QPLI+ RGVSYCKNLLSP
Sbjct: 1204 ICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPLIRARGVSYCKNLLSP 1263
Query: 3868 RFEQS----GESETVLDKTYYVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQ 4035
RFE S G+ LDKTYYV+LPPELC+VHPL GSL+RGAQRLPSIMRRVESMLLAVQ
Sbjct: 1264 RFEHSDAREGDFSENLDKTYYVYLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQ 1323
Query: 4036 LKNLISYPIPTSKILEALTAASCQETFCYERAELLGDAYLKWVVS 4170
LK++I YP+P +KILEALTAASCQET CYERAELLGDAYLKWVVS
Sbjct: 1324 LKDIIDYPVPATKILEALTAASCQETLCYERAELLGDAYLKWVVS 1368
Score = 535 bits (1379), Expect(3) = 0.0
Identities = 276/359 (76%), Positives = 301/359 (82%), Gaps = 2/359 (0%)
Frame = +3
Query: 4170 SGFRFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 4349
S F FLKYPQKHEGQLTRMRQQMVSNMVLYQ+AL K LQSYIQADRFAPSRW+APGV PV
Sbjct: 1368 SRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWAAPGVLPV 1427
Query: 4350 FDEDTKDGGSSFFDEEQK--PVSEENSDVFXXXXXXXXXXXXXXSSYRVLSSKTLADVVE 4523
FDE++++ S FDEE + +E+ D + S YRVLSSKTLADVVE
Sbjct: 1428 FDEESREYEPSIFDEESTGCELQKESYDDYADNMQEDGEIEGDSSCYRVLSSKTLADVVE 1487
Query: 4524 ALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALK 4703
ALIGVYYV GGKIAANHLMKWIGIH E DP+E+ K ++PES+++SI+F L+ L
Sbjct: 1488 ALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIPPP-KPYDIPESIMRSINFDTLKGVLG 1546
Query: 4704 YEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDL 4883
EF+ KGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYT LPPGRLTDL
Sbjct: 1547 IEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDL 1606
Query: 4884 RAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKA 5063
RAAAVNNENFARVAVKHKLH++LRHGSSALE QIREFVK+VQ E KPGFNSFGLGDCKA
Sbjct: 1607 RAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFGLGDCKA 1666
Query: 5064 PKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQERYKQQA 5240
PKVLGDIVESIAGAIFLDSG DT+ WKVFQPLL PMVTPETLPMHPVRELQER +QQA
Sbjct: 1667 PKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQA 1725
Score = 197 bits (500), Expect(3) = 0.0
Identities = 101/162 (62%), Positives = 108/162 (66%)
Frame = +1
Query: 5242 EGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMXXXXXXXXXXXXXXXXXXXXXXXXH 5421
EGLEYKASR+GN ATVEVF+DGVQ+GVAQNPQKKM
Sbjct: 1726 EGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVV------------- 1772
Query: 5422 IXXXXXXXXXXXXXXXXXXXXHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF 5601
+ Q FTRQTLNDICLR+ WPMP YRCV EGGPAHAKRF +
Sbjct: 1773 LKEKETATKKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVY 1832
Query: 5602 GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTF 5727
VRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLN+ F
Sbjct: 1833 SVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNRDF 1874
Score = 49.7 bits (117), Expect = 5e-04
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 32/165 (19%)
Frame = +3
Query: 4728 LVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNE 4907
++EA+T AS + CY+R E +GDA L +++R LF Y G+LT +R V+N
Sbjct: 1337 ILEALTAASCQET--LCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNM 1394
Query: 4908 NFARVAVKHKLHLYLRHGSSA------------LEKQIREFVKEVQTESS------KPGF 5033
+ A+ L Y++ A +++ RE+ + E S K +
Sbjct: 1395 VLYQYALNKTLQSYIQADRFAPSRWAAPGVLPVFDEESREYEPSIFDEESTGCELQKESY 1454
Query: 5034 NSF-----------GLGDC---KAPKVLGDIVESIAGAIFLDSGK 5126
+ + G C + K L D+VE++ G ++ GK
Sbjct: 1455 DDYADNMQEDGEIEGDSSCYRVLSSKTLADVVEALIGVYYVAGGK 1499
>ref|NP_189978.1| putative protein; protein id: At3g43920.1 [Arabidopsis
thaliana]|gi|11358029|pir||T48946 hypothetical protein
T15B3.60 - Arabidopsis
thaliana|gi|7594553|emb|CAB88120.1| putative protein
[Arabidopsis thaliana]
Length = 1531
Score = 273 bits (698), Expect(2) = e-114
Identities = 152/347 (43%), Positives = 209/347 (59%)
Frame = +3
Query: 4182 FLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDED 4361
FLKYP K EGQL+R RQ ++SN L++ + LQ YI+ F P RW+APG +F
Sbjct: 992 FLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPGQFSLFPVP 1051
Query: 4362 TKDGGSSFFDEEQKPVSEENSDVFXXXXXXXXXXXXXXSSYRVLSSKTLADVVEALIGVY 4541
K G D + P+ + F +R + SK+++D EALIG Y
Sbjct: 1052 CKCG----IDTREVPLDPK----FFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGAY 1103
Query: 4542 YVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEK 4721
YV GG A+ H+MKW+GI V+ DP+ V + V++ + K + + LER +++EF K
Sbjct: 1104 YVSGGLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQHEFSAK 1163
Query: 4722 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVN 4901
LL EAITH+S S Y+RLEF+GD+VLD LITRHLF TY PG +TDLR+A VN
Sbjct: 1164 FLLKEAITHSSLRES--YSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVN 1221
Query: 4902 NENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGD 5081
NENFA+VAVK+ LH +L+ ++ LE QI +++ Q KP + + PK LGD
Sbjct: 1222 NENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQ----KPDETGRSIPSIQGPKALGD 1277
Query: 5082 IVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQE 5222
+VESIAGA+ +D+ D W+VF+PLL P+VTP+ L + P REL E
Sbjct: 1278 VVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNE 1324
Score = 166 bits (419), Expect(2) = e-114
Identities = 188/786 (23%), Positives = 315/786 (39%), Gaps = 33/786 (4%)
Frame = +1
Query: 1912 AAVADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCAS 2091
+AV G V+PK++ L LL ++ + ++ VER++ A V+ + + SL+++
Sbjct: 335 SAVISGHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEASLAYLNVLY 394
Query: 2092 MIGHNNSQEMKSSQMQDTISK-FRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLA 2268
+ +N S + + +MQ I F+ G V LL T V EEG + C+ ++ FDL KT+ +
Sbjct: 395 LTENNPSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCS 454
Query: 2269 YIQSRGRARKPGSDYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 2448
Y QS+ A++ S I+ +ERGN L + R+ I+ + +LK +
Sbjct: 455 YSQSQKHAKQSNSKSIMFLERGNPKQRDHLHDLMR-----REVLIQDPEAPNLKSCPPPV 509
Query: 2449 SIDAVPGTVYKVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTE 2628
+ V+ G+MV +P + S + P E
Sbjct: 510 K------NGHGVKEIGSMV---------------IPDSNITVSEEAASTQTMSDPPSRNE 548
Query: 2629 YSCRLQLPCNAPFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAE 2808
QLP CKKL + LL + +G++
Sbjct: 549 -----QLP--------------------------PCKKLR----LDNNLL--QSNGKEKV 571
Query: 2809 KADQDDEGEPVPGTARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFG 2988
+ + G+ + +E + A+ L G W G+ + F Y ++ C G
Sbjct: 572 ASSKSKSSSSAAGSKKRKELHGTTCANALSGTW---GENI--DGATFQAYKFDFCCNISG 626
Query: 2989 SSKDPFLSEVSEFAILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSL 3168
S F++L + L +V + MDLY+ R ++ KAS++ G + +++ +L
Sbjct: 627 EV-------YSSFSLLLESTLAEDVGKVEMDLYLVRKLV-KASVSPCGQIRLSQEELVKA 678
Query: 3169 KKFHVRLMS------------------IVLDVDVEPSTTPWDPAKAYLFVPVTDNTSMEP 3294
K F + +L D +++ W PA +L +PV N +
Sbjct: 679 KYFQQFFFNGMFGKLFVGSKSQGTKREFLLQTD---TSSLWHPAFMFLLLPVETN-DLAS 734
Query: 3295 IKGINWELVEKITKTTAW--DNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHNIVFGQ 3468
I+W + + N L R G T G ++
Sbjct: 735 SATIDWSAINSCASIVEFLKKNSLLDLRDSD--GNQCNTSSGQE-----------VLLDD 781
Query: 3469 KSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLMMADGCMVAEDLIGKIV 3648
K T I A AS D K E+L +V
Sbjct: 782 KMEETNLIHFANASSD---------------KNSLEEL--------------------VV 806
Query: 3649 TAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYGVDLNCKQQPLIK 3828
A H+G+ + + D SA + F + G Y TYA+Y+ +KYG+ L QPL+K
Sbjct: 807 IAIHTGRIYSIVEAVSDSSAMSPF-EVDASSG---YATYAEYFNKKYGIVLAHPNQPLMK 862
Query: 3829 GRGVSYCKNLLSP-------RFEQSGESETVLDKTYYVFLPPELCVVHPLSGSLIRGAQR 3987
+ + NLL + E + + LPPEL + ++++
Sbjct: 863 LKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVLKSIYL 922
Query: 3988 LPSIMRRVESMLLAVQLKNLI-----SYPIPTSKILEALTAASCQETFCYERAELLGDAY 4152
LPS+M R+ES++LA QL+ I ++ I ++ ILEA+T +C E+F ER ELLGD+
Sbjct: 923 LPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLELLGDSV 982
Query: 4153 LKWVVS 4170
LK+V S
Sbjct: 983 LKYVAS 988
Score = 108 bits (270), Expect = 1e-21
Identities = 64/145 (44%), Positives = 82/145 (56%)
Frame = +1
Query: 754 YQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLVYQ 933
Y+L V E AK +N IA L TG K+ I LIK++ S K L +FL P V L
Sbjct: 47 YELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGS---SDTDKRLIIFLAPTVNL--- 100
Query: 934 QAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIRMET 1113
Q IR +V Y G G D W S+RW EF VLVMT QILL++LR + +++E
Sbjct: 101 QCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 160
Query: 1114 IDLLILDECHHAVKKHPYSLVMSEF 1188
+ LLI+DECHH HPY+ +M F
Sbjct: 161 VCLLIIDECHHTTGNHPYAKLMKIF 185
Score = 53.5 bits (127), Expect = 4e-05
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Frame = +3
Query: 4632 LKNVNVPESVLKSI----------DFVGLERALKYEFK--------EKGLLVEAITHASR 4757
L ++VP +VLKSI + + L L+ E ++EA+T +
Sbjct: 907 LARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTC 966
Query: 4758 PSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHK 4937
P S +RLE +GD+VL ++ + HLF Y G+L+ R + ++N N R+ K
Sbjct: 967 PES--FSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRK 1024
Query: 4938 LHLYLRHGS 4964
L Y+R+G+
Sbjct: 1025 LQGYIRNGA 1033
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 138
effective length of database: 244,400,193
effective search space used: 439920347400
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)